RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C KAE1P36132 386 aa3.78□□□□□ -1.8
PTA1YAL043C YIL166CP40445 542 aa3.78□□□□□ -1.8
PTA1YAL043C CAT5P41735 233 aa3.78□□□□□ -1.8
PTA1YAL043C CHA4P43634 648 aa3.78□□□□□ -1.8
PTA1YAL043C YAE1P47118 141 aaPredicted RBP3.78□□□□□ -1.8
PTA1YAL043C ARO8P53090 500 aaKnown RBP3.78□□□□□ -1.8
PTA1YAL043C DUS1P53759 423 aaKnown RBP3.78□□□□□ -1.8
PTA1YAL043C OST6Q03723 332 aa3.78□□□□□ -1.8
PTA1YAL043C VHS1Q03785 461 aa3.78□□□□□ -1.8
PTA1YAL043C RGC1Q06108 1083 aaKnown RBP3.78□□□□□ -1.8
PTA1YAL043C PFA4Q12006 378 aa3.78□□□□□ -1.8
PTA1YAL043C ATG41Q12048 136 aa3.78□□□□□ -1.8
PTA1YAL043C TMS1Q12116 473 aa3.78□□□□□ -1.8
PTA1YAL043C YLR111WQ12528 110 aa3.78□□□□□ -1.8
PTA1YAL043C Q0182Q9ZZW1 134 aa3.78□□□□□ -1.8
PTA1YAL043C COX3P00420 269 aa3.77□□□□□ -1.81
PTA1YAL043C GCN4P03069 281 aa3.77□□□□□ -1.81
PTA1YAL043C KIN3P22209 435 aa3.77□□□□□ -1.81
PTA1YAL043C YJU2P28320 278 aaPredicted RBP3.77□□□□□ -1.81
PTA1YAL043C HIS7P33734 552 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C TCM62P38228 572 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C YBR071WP38243 211 aa3.77□□□□□ -1.81
PTA1YAL043C CCZ1P38273 704 aa3.77□□□□□ -1.81
PTA1YAL043C RRP4P38792 359 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C PEX28P38848 579 aa3.77□□□□□ -1.81
PTA1YAL043C IRC7P43623 340 aa3.77□□□□□ -1.81
PTA1YAL043C NUP57P48837 541 aa3.77□□□□□ -1.81
PTA1YAL043C DOC1P53068 250 aa3.77□□□□□ -1.81
PTA1YAL043C YGR042WP53227 271 aa3.77□□□□□ -1.81
PTA1YAL043C FYV6P53913 173 aa3.77□□□□□ -1.81
PTA1YAL043C ASI3P53983 676 aa3.77□□□□□ -1.81
PTA1YAL043C BUD25P85052 153 aa3.77□□□□□ -1.81
PTA1YAL043C YPL034WQ03083 165 aa3.77□□□□□ -1.81
PTA1YAL043C PFA5Q03289 374 aa3.77□□□□□ -1.81
PTA1YAL043C RVB1Q03940 463 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C TY1A-MR1Q04215 440 aa3.77□□□□□ -1.81
PTA1YAL043C ARO10Q06408 635 aa3.77□□□□□ -1.81
PTA1YAL043C YLR040CQ07988 224 aa3.77□□□□□ -1.81
PTA1YAL043C SUL2Q12325 893 aa3.77□□□□□ -1.81
PTA1YAL043C YJR112W-AQ3E743 109 aa3.77□□□□□ -1.81
PTA1YAL043C RPS21BQ3E754 87 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C YLR422WQ06409 1932 aa3.77□□□□□ -1.81
PTA1YAL043C CET1O13297 549 aaPredicted RBP3.77□□□□□ -1.81
PTA1YAL043C SPS2P08459 502 aa3.77□□□□□ -1.81
PTA1YAL043C PRB1P09232 635 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-LR1P0C2J4 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-FP0CX61 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-GR2P0CX62 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-CP25383 438 aa3.77□□□□□ -1.81
PTA1YAL043C LOT5P34234 306 aa3.77□□□□□ -1.81
PTA1YAL043C KKQ8P36004 724 aa3.77□□□□□ -1.81
PTA1YAL043C YBR063CP38083 404 aa3.77□□□□□ -1.81
PTA1YAL043C EHT1P38295 451 aa3.77□□□□□ -1.81
PTA1YAL043C MAD2P40958 196 aa3.77□□□□□ -1.81
PTA1YAL043C CIN1P40987 1014 aa3.77□□□□□ -1.81
PTA1YAL043C PFS2P42841 465 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C PRM10P42946 383 aa3.77□□□□□ -1.81
PTA1YAL043C BIR1P47134 954 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-DR2Q03483 438 aa3.77□□□□□ -1.81
PTA1YAL043C ROY1Q04847 553 aa3.77□□□□□ -1.81
PTA1YAL043C YMR315WQ04869 349 aaKnown RBP3.77□□□□□ -1.81
PTA1YAL043C YLR224WQ05947 369 aa3.77□□□□□ -1.81
PTA1YAL043C FEX2Q08991 375 aa3.77□□□□□ -1.81
PTA1YAL043C YDL109CQ12103 647 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-BQ12260 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-OR2Q12293 438 aa3.77□□□□□ -1.81
PTA1YAL043C SFM1Q12314 213 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-DR1Q12392 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-OR1Q12439 438 aa3.77□□□□□ -1.81
PTA1YAL043C TY2A-DR3Q99303 438 aa3.77□□□□□ -1.81
PTA1YAL043C CAN1P04817 590 aa3.76□□□□□ -1.81
PTA1YAL043C SGA1P08019 549 aa3.76□□□□□ -1.81
PTA1YAL043C TFS1P14306 219 aa3.76□□□□□ -1.81
PTA1YAL043C CDC23P16522 626 aa3.76□□□□□ -1.81
PTA1YAL043C PHO80P20052 293 aa3.76□□□□□ -1.81
PTA1YAL043C GPI12P23797 304 aa3.76□□□□□ -1.81
PTA1YAL043C SSH4P32343 579 aa3.76□□□□□ -1.81
PTA1YAL043C DOA4P32571 926 aa3.76□□□□□ -1.81
PTA1YAL043C VAM7P32912 316 aa3.76□□□□□ -1.81
PTA1YAL043C MTH1P35198 433 aa3.76□□□□□ -1.81
PTA1YAL043C SHE2P36068 246 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
PTA1YAL043C CHK1P38147 527 aa3.76□□□□□ -1.81
PTA1YAL043C FMP23P38231 175 aa3.76□□□□□ -1.81
PTA1YAL043C NOP16P40007 231 aaKnown RBP3.76□□□□□ -1.81
PTA1YAL043C RFC4P40339 323 aaKnown RBP3.76□□□□□ -1.81
PTA1YAL043C NAS2P40555 220 aa3.76□□□□□ -1.81
PTA1YAL043C GDS1P41913 522 aa3.76□□□□□ -1.81
PTA1YAL043C LSB6P42951 607 aa3.76□□□□□ -1.81
PTA1YAL043C CAF16P43569 289 aa3.76□□□□□ -1.81
PTA1YAL043C IDS2P46958 469 aa3.76□□□□□ -1.81
PTA1YAL043C AIM25P47140 327 aa3.76□□□□□ -1.81
PTA1YAL043C RHO4Q00246 291 aa3.76□□□□□ -1.81
PTA1YAL043C ARG5,6Q01217 863 aa3.76□□□□□ -1.81
PTA1YAL043C YDR541CQ03049 344 aa3.76□□□□□ -1.81
PTA1YAL043C VBA1Q04301 562 aa3.76□□□□□ -1.81
PTA1YAL043C TPO3Q06451 622 aa3.76□□□□□ -1.81
PTA1YAL043C CYK3Q07533 885 aa3.76□□□□□ -1.81
PTA1YAL043C YPR022CQ12139 1133 aa3.76□□□□□ -1.81
PTA1YAL043C PCL9Q12477 304 aa3.76□□□□□ -1.81
PTA1YAL043C CYC1P00044 109 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms