RNA–Protein interactions for RNA: YPR112C

MRD1, Transcript of Essential conserved small ribosomal subunit (40s) synthesis factor, yeast

Gene MRD1, Length 2,664 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRD1	YPR112C	OCA5	P38738	679 aa		3.23	□□□□□ -1.89
MRD1	YPR112C	NST1	P53935	1240 aa		3.23	□□□□□ -1.89
MRD1	YPR112C	YLR419W	Q06698	1435 aa	Known RBP	3.22	□□□□□ -1.89
MRD1	YPR112C	TRM3	Q07527	1436 aa		3.22	□□□□□ -1.89
MRD1	YPR112C	RRN6	P32786	894 aa		3.22	□□□□□ -1.89
MRD1	YPR112C	FPR3	P38911	411 aa	Known RBP	3.22	□□□□□ -1.89
MRD1	YPR112C	PDR11	P40550	1411 aa		3.22	□□□□□ -1.89
MRD1	YPR112C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.21	□□□□□ -1.89
MRD1	YPR112C	YBL036C	P38197	257 aa		3.21	□□□□□ -1.9
MRD1	YPR112C	YPR204W	Q08995	1032 aa		3.21	□□□□□ -1.9
MRD1	YPR112C	CSN12	P47130	423 aa		3.21	□□□□□ -1.9
MRD1	YPR112C	RPP0	P05317	312 aa	Known RBP	3.2	□□□□□ -1.9
MRD1	YPR112C	TIF1	P10081	395 aa	Known RBP	3.2	□□□□□ -1.9
MRD1	YPR112C	MNN4	P36044	1178 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	KIC1	P38692	1080 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	SSF1	P38789	453 aa	Predicted RBP	3.2	□□□□□ -1.9
MRD1	YPR112C	EAF7	P53911	425 aa	Known RBP	3.2	□□□□□ -1.9
MRD1	YPR112C	YML083C	Q04526	418 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	LAM6	Q08001	693 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	CLC1	P17891	233 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	BIO2	P32451	375 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	SOL3	P38858	249 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	NNF1	P47149	201 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	PDS5	Q04264	1277 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	RAV1	P47104	1357 aa		3.2	□□□□□ -1.9
MRD1	YPR112C	RPC31	P17890	251 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	PUP1	P25043	261 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	CPS1	P27614	576 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	RRP14	P36080	434 aa	Known RBP	3.19	□□□□□ -1.9
MRD1	YPR112C	TTI1	P36097	1038 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	NUG1	P40010	520 aa	Known RBP	3.19	□□□□□ -1.9
MRD1	YPR112C	YLR326W	Q06170	240 aa	Known RBP	3.19	□□□□□ -1.9
MRD1	YPR112C	FPR4	Q06205	392 aa	Predicted RBP	3.19	□□□□□ -1.9
MRD1	YPR112C	HAT1	Q12341	374 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	DRS2	P39524	1355 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	SVF1	Q05515	481 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	CDC45	Q08032	650 aa		3.19	□□□□□ -1.9
MRD1	YPR112C	VNX1	P42839	908 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	FAR11	P53917	953 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	RTC1	Q08281	1341 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	SUP45	P12385	437 aa	Known RBP	3.18	□□□□□ -1.9
MRD1	YPR112C	GAP1	P19145	602 aa	Predicted RBP	3.18	□□□□□ -1.9
MRD1	YPR112C	SEC20	P28791	383 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	IME2	P32581	645 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	VPS27	P40343	622 aa	Known RBP	3.18	□□□□□ -1.9
MRD1	YPR112C	MRX10	Q05648	414 aa		3.18	□□□□□ -1.9
MRD1	YPR112C	RTG2	P32608	588 aa	Known RBP	3.17	□□□□□ -1.9
MRD1	YPR112C	STM1	P39015	273 aa	Known RBP	3.17	□□□□□ -1.9
MRD1	YPR112C	ALD2	P47771	506 aa		3.17	□□□□□ -1.9
MRD1	YPR112C	TRL1	P09880	827 aa	Known RBP	3.17	□□□□□ -1.9
MRD1	YPR112C	SPC42	P36094	363 aa		3.17	□□□□□ -1.9
MRD1	YPR112C	YFR016C	P43597	1233 aa	Known RBP	3.17	□□□□□ -1.9
MRD1	YPR112C	ATE1	P16639	503 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	RDS2	P19541	446 aa	Known RBP	3.16	□□□□□ -1.9
MRD1	YPR112C	PPG1	P32838	368 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	PTC3	P34221	468 aa	Known RBP	3.16	□□□□□ -1.9
MRD1	YPR112C	TAF5	P38129	798 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	TPS3	P38426	1054 aa	Known RBP	3.16	□□□□□ -1.9
MRD1	YPR112C	NMD2	P38798	1089 aa	Known RBP	3.16	□□□□□ -1.9
MRD1	YPR112C	DOS2	P54858	310 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	USO1	P25386	1790 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	CFT1	Q06632	1357 aa	Known RBP	3.16	□□□□□ -1.9
MRD1	YPR112C	ESL2	P36168	1195 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
MRD1	YPR112C	OSW7	P43611	510 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	RSC30	P38781	883 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	ORC6	P38826	435 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	THI12	P42883	340 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	THI5	P43534	340 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	THI11	P47183	340 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	YAF9	P53930	226 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	THI13	Q07748	340 aa		3.16	□□□□□ -1.9
MRD1	YPR112C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.15	□□□□□ -1.9
MRD1	YPR112C	YOR238W	Q08634	303 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	STB3	Q12427	513 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	SNF2	P22082	1703 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	DNF3	Q12674	1656 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	PEP12	P32854	288 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	OPY1	P38271	328 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	IPL1	P38991	367 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	YIR014W	P40570	242 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	YJR008W	P47085	338 aa		3.15	□□□□□ -1.91
MRD1	YPR112C	MAG2	Q06436	670 aa	Known RBP	3.15	□□□□□ -1.91
MRD1	YPR112C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
MRD1	YPR112C	TCB2	P48231	1178 aa		3.14	□□□□□ -1.91
MRD1	YPR112C	KIP3	P53086	805 aa	Known RBP	3.14	□□□□□ -1.91
MRD1	YPR112C	TYW1	Q08960	810 aa	Known RBP	3.14	□□□□□ -1.91
MRD1	YPR112C	WHI5	Q12416	295 aa		3.14	□□□□□ -1.91
MRD1	YPR112C	SIS2	P36024	562 aa		3.14	□□□□□ -1.91
MRD1	YPR112C	YMR196W	Q04336	1088 aa		3.14	□□□□□ -1.91
MRD1	YPR112C	RVB2	Q12464	471 aa	Known RBP	3.14	□□□□□ -1.91
MRD1	YPR112C	PSE1	P32337	1089 aa	Known RBP	3.13	□□□□□ -1.91
MRD1	YPR112C	SWE1	P32944	819 aa		3.13	□□□□□ -1.91
MRD1	YPR112C	TYS1	P36421	394 aa	Known RBP	3.13	□□□□□ -1.91
MRD1	YPR112C	SNF7	P39929	240 aa	Known RBP	3.13	□□□□□ -1.91
MRD1	YPR112C	AIR2	Q12476	344 aa	Known RBP	3.13	□□□□□ -1.91
MRD1	YPR112C	BCK1	Q01389	1478 aa		3.13	□□□□□ -1.91
MRD1	YPR112C	RGR1	P19263	1082 aa		3.13	□□□□□ -1.91
MRD1	YPR112C	ALD4	P46367	519 aa	Known RBP	3.13	□□□□□ -1.91
MRD1	YPR112C	SRP40	P32583	406 aa	Predicted RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms