RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	SPC110	P32380	944 aa		3.3	□□□□□ -1.88
LCL1	YPL056C	USO1	P25386	1790 aa		3.3	□□□□□ -1.88
LCL1	YPL056C	HSP82	P02829	709 aa	Known RBP	3.29	□□□□□ -1.88
LCL1	YPL056C	YIL055C	P40523	627 aa	Known RBP	3.29	□□□□□ -1.88
LCL1	YPL056C	PLP2	Q12017	286 aa		3.29	□□□□□ -1.88
LCL1	YPL056C	CAT8	P39113	1433 aa		3.28	□□□□□ -1.88
LCL1	YPL056C	SPT2	P06843	333 aa	Predicted RBP	3.28	□□□□□ -1.88
LCL1	YPL056C	RNA1	P11745	407 aa	Known RBP	3.28	□□□□□ -1.88
LCL1	YPL056C	PAF1	P38351	445 aa		3.28	□□□□□ -1.88
LCL1	YPL056C	AIR1	P40507	360 aa	Known RBP	3.28	□□□□□ -1.88
LCL1	YPL056C	RPC31	P17890	251 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	MRM1	P25270	412 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	NAP1	P25293	417 aa	Known RBP	3.27	□□□□□ -1.89
LCL1	YPL056C	VPS4	P52917	437 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	IOC4	Q04213	475 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	PSH1	Q12161	406 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	YSP2	Q06681	1438 aa		3.27	□□□□□ -1.89
LCL1	YPL056C	SSM4	P40318	1319 aa		3.26	□□□□□ -1.89
LCL1	YPL056C	ROX1	P25042	368 aa		3.26	□□□□□ -1.89
LCL1	YPL056C	YAP3	P38749	330 aa		3.26	□□□□□ -1.89
LCL1	YPL056C	NMD2	P38798	1089 aa	Known RBP	3.26	□□□□□ -1.89
LCL1	YPL056C	YNL011C	P53980	444 aa		3.26	□□□□□ -1.89
LCL1	YPL056C	SAS10	Q12136	610 aa	Predicted RBP	3.26	□□□□□ -1.89
LCL1	YPL056C	GEA1	P47102	1408 aa	Predicted RBP	3.26	□□□□□ -1.89
LCL1	YPL056C	EDE1	P34216	1381 aa		3.25	□□□□□ -1.89
LCL1	YPL056C	GCN2	P15442	1659 aa		3.25	□□□□□ -1.89
LCL1	YPL056C	FUN12	P39730	1002 aa	Known RBP	3.25	□□□□□ -1.89
LCL1	YPL056C	YIR014W	P40570	242 aa		3.25	□□□□□ -1.89
LCL1	YPL056C	PIL1	P53252	339 aa	Known RBP	3.25	□□□□□ -1.89
LCL1	YPL056C	IML1	P47170	1584 aa		3.25	□□□□□ -1.89
LCL1	YPL056C	BNR1	P40450	1375 aa		3.25	□□□□□ -1.89
LCL1	YPL056C	HAP1	P0CE41	1502 aa		3.24	□□□□□ -1.89
LCL1	YPL056C	NUP188	P52593	1655 aa	Known RBP	3.24	□□□□□ -1.89
LCL1	YPL056C	SLN1	P39928	1220 aa	Predicted RBP	3.24	□□□□□ -1.89
LCL1	YPL056C	CTR9	P89105	1077 aa		3.24	□□□□□ -1.89
LCL1	YPL056C	MAK10	Q02197	733 aa		3.24	□□□□□ -1.89
LCL1	YPL056C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.24	□□□□□ -1.89
LCL1	YPL056C	BYE1	P36106	594 aa		3.23	□□□□□ -1.89
LCL1	YPL056C	SIC1	P38634	284 aa		3.23	□□□□□ -1.89
LCL1	YPL056C	SMC3	P47037	1230 aa		3.23	□□□□□ -1.89
LCL1	YPL056C	NOP58	Q12499	511 aa	Known RBP	3.23	□□□□□ -1.89
LCL1	YPL056C	IFH1	P39520	1085 aa		3.22	□□□□□ -1.89
LCL1	YPL056C	YDR444W	Q04093	687 aa		3.22	□□□□□ -1.89
LCL1	YPL056C	NOT3	P06102	836 aa	Known RBP	3.21	□□□□□ -1.9
LCL1	YPL056C	RPN1	P38764	993 aa	Known RBP	3.21	□□□□□ -1.9
LCL1	YPL056C	RAD26	P40352	1085 aa		3.21	□□□□□ -1.9
LCL1	YPL056C	MSH4	P40965	878 aa	Predicted RBP	3.21	□□□□□ -1.9
LCL1	YPL056C	LSB3	P43603	459 aa	Known RBP	3.21	□□□□□ -1.9
LCL1	YPL056C	VMR1	P38735	1592 aa		3.21	□□□□□ -1.9
LCL1	YPL056C	CKB1	P43639	278 aa		3.2	□□□□□ -1.9
LCL1	YPL056C	RLP24	Q07915	199 aa	Known RBP	3.2	□□□□□ -1.9
LCL1	YPL056C	ETT1	Q08421	412 aa	Known RBP	3.2	□□□□□ -1.9
LCL1	YPL056C	RAM1	P22007	431 aa		3.19	□□□□□ -1.9
LCL1	YPL056C	MSH3	P25336	1018 aa		3.19	□□□□□ -1.9
LCL1	YPL056C	CHZ1	P40019	153 aa	Predicted RBP	3.19	□□□□□ -1.9
LCL1	YPL056C	PRP3	Q03338	469 aa	Predicted RBP	3.19	□□□□□ -1.9
LCL1	YPL056C	GYP1	Q08484	637 aa		3.19	□□□□□ -1.9
LCL1	YPL056C	SWE1	P32944	819 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	MED8	P38304	223 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	YPP1	P46951	817 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	CLA4	P48562	842 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	TAN1	P53072	289 aa	Predicted RBP	3.18	□□□□□ -1.9
LCL1	YPL056C	NNF2	P53253	936 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	GRX3	Q03835	250 aa		3.18	□□□□□ -1.9
LCL1	YPL056C	LEU3	P08638	886 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	PCT1	P13259	424 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	SRP54	P20424	541 aa	Known RBP	3.17	□□□□□ -1.9
LCL1	YPL056C	KNS1	P32350	737 aa	Predicted RBP	3.17	□□□□□ -1.9
LCL1	YPL056C	ECM1	P39715	212 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	DJP1	P40564	432 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	DSN1	P40568	576 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	THI12	P42883	340 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	THI5	P43534	340 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	THI11	P47183	340 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	PSD2	P53037	1138 aa	Known RBP	3.17	□□□□□ -1.9
LCL1	YPL056C	NST1	P53935	1240 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	YMR196W	Q04336	1088 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	THI13	Q07748	340 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	NOP8	Q08287	484 aa	Predicted RBP	3.17	□□□□□ -1.9
LCL1	YPL056C	BMS1	Q08965	1183 aa	Known RBP	3.17	□□□□□ -1.9
LCL1	YPL056C	YEL077C	Q3E7X8	1277 aa		3.17	□□□□□ -1.9
LCL1	YPL056C	MHP1	P43638	1398 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	MSP1	P28737	362 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	LTV1	P34078	463 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	IPL1	P38991	367 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	SNU71	P53207	620 aa	Known RBP	3.16	□□□□□ -1.9
LCL1	YPL056C	MDG1	P53885	366 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	DOS2	P54858	310 aa		3.16	□□□□□ -1.9
LCL1	YPL056C	ECM16	Q04217	1267 aa	Known RBP	3.16	□□□□□ -1.9
LCL1	YPL056C	RPN7	Q06103	429 aa	Known RBP	3.16	□□□□□ -1.9
LCL1	YPL056C	PDR5	P33302	1511 aa	Known RBP	3.15	□□□□□ -1.9
LCL1	YPL056C	CLB5	P30283	435 aa		3.15	□□□□□ -1.91
LCL1	YPL056C	RPS0A	P32905	252 aa	Known RBP	3.15	□□□□□ -1.91
LCL1	YPL056C	SAP190	P36123	1033 aa		3.15	□□□□□ -1.91
LCL1	YPL056C	CIN4	P39110	191 aa		3.15	□□□□□ -1.91
LCL1	YPL056C	TLG1	Q03322	224 aa		3.15	□□□□□ -1.91
LCL1	YPL056C	YSH1	Q06224	779 aa	Predicted RBP	3.15	□□□□□ -1.91
LCL1	YPL056C	PET111	P08468	800 aa		3.14	□□□□□ -1.91
LCL1	YPL056C	RAD51	P25454	400 aa		3.14	□□□□□ -1.91
LCL1	YPL056C	SWI3	P32591	825 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms