RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W FPR4Q06205 392 aaPredicted RBP4.62□□□□□ -1.67
SWI1YPL016W SUP35P05453 685 aaKnown RBP4.62□□□□□ -1.67
SWI1YPL016W MCM1P11746 286 aa4.62□□□□□ -1.67
SWI1YPL016W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
SWI1YPL016W RLP24Q07915 199 aaKnown RBP4.62□□□□□ -1.67
SWI1YPL016W BYE1P36106 594 aa4.61□□□□□ -1.67
SWI1YPL016W PCT1P13259 424 aa4.6□□□□□ -1.67
SWI1YPL016W YJR008WP47085 338 aa4.6□□□□□ -1.67
SWI1YPL016W SAP190P36123 1033 aa4.6□□□□□ -1.67
SWI1YPL016W MDG1P53885 366 aa4.59□□□□□ -1.67
SWI1YPL016W RSC1P53236 928 aa4.59□□□□□ -1.68
SWI1YPL016W RSC8P43609 557 aaKnown RBP4.58□□□□□ -1.68
SWI1YPL016W HOT1Q03213 719 aa4.58□□□□□ -1.68
SWI1YPL016W RME1P32338 300 aaKnown RBP4.58□□□□□ -1.68
SWI1YPL016W PSR1Q07800 427 aa4.58□□□□□ -1.68
SWI1YPL016W SPT2P06843 333 aaPredicted RBP4.57□□□□□ -1.68
SWI1YPL016W TRK1P12685 1235 aa4.57□□□□□ -1.68
SWI1YPL016W SLP1Q12232 587 aa4.57□□□□□ -1.68
SWI1YPL016W MET10P39692 1035 aa4.57□□□□□ -1.68
SWI1YPL016W LEM3P42838 414 aa4.56□□□□□ -1.68
SWI1YPL016W HAA1Q12753 694 aaKnown RBP4.56□□□□□ -1.68
SWI1YPL016W MPE1P35728 441 aaKnown RBP4.56□□□□□ -1.68
SWI1YPL016W DOS2P54858 310 aa4.56□□□□□ -1.68
SWI1YPL016W STT4P37297 1900 aa4.56□□□□□ -1.68
SWI1YPL016W CIR2Q08822 631 aa4.55□□□□□ -1.68
SWI1YPL016W NOT3P06102 836 aaKnown RBP4.55□□□□□ -1.68
SWI1YPL016W PAP2P53632 584 aaKnown RBP4.55□□□□□ -1.68
SWI1YPL016W SIT1P39980 628 aa4.54□□□□□ -1.68
SWI1YPL016W RPO41P13433 1351 aaKnown RBP4.54□□□□□ -1.68
SWI1YPL016W ELM1P32801 640 aa4.54□□□□□ -1.68
SWI1YPL016W ILV3P39522 585 aaKnown RBP4.53□□□□□ -1.68
SWI1YPL016W YMR102CQ03177 834 aa4.53□□□□□ -1.68
SWI1YPL016W AOS1Q06624 347 aa4.53□□□□□ -1.68
SWI1YPL016W ORM2Q06144 216 aa4.53□□□□□ -1.68
SWI1YPL016W YLR422WQ06409 1932 aa4.53□□□□□ -1.68
SWI1YPL016W SUI2P20459 304 aaKnown RBP4.53□□□□□ -1.68
SWI1YPL016W MSP1P28737 362 aa4.53□□□□□ -1.68
SWI1YPL016W CDC16P09798 840 aa4.52□□□□□ -1.69
SWI1YPL016W NMD2P38798 1089 aaKnown RBP4.52□□□□□ -1.69
SWI1YPL016W RAD51P25454 400 aa4.52□□□□□ -1.69
SWI1YPL016W TEA1P47988 759 aa4.52□□□□□ -1.69
SWI1YPL016W MCM2P29469 868 aa4.51□□□□□ -1.69
SWI1YPL016W SSL2Q00578 843 aa4.51□□□□□ -1.69
SWI1YPL016W COG8Q04632 607 aa4.51□□□□□ -1.69
SWI1YPL016W RPN7Q06103 429 aaKnown RBP4.51□□□□□ -1.69
SWI1YPL016W RVB2Q12464 471 aaKnown RBP4.51□□□□□ -1.69
SWI1YPL016W PSE1P32337 1089 aaKnown RBP4.51□□□□□ -1.69
SWI1YPL016W HAP5Q02516 242 aa4.51□□□□□ -1.69
SWI1YPL016W ORC1P54784 914 aaPredicted RBP4.51□□□□□ -1.69
SWI1YPL016W WHI5Q12416 295 aa4.51□□□□□ -1.69
SWI1YPL016W YGL082WP53155 381 aa4.5□□□□□ -1.69
SWI1YPL016W PUP2P32379 260 aa4.5□□□□□ -1.69
SWI1YPL016W UTP13Q05946 817 aaKnown RBP4.5□□□□□ -1.69
SWI1YPL016W NOP14Q99207 810 aaKnown RBP4.5□□□□□ -1.69
SWI1YPL016W YMR1P47147 688 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SWI1YPL016W YRB30P53107 440 aaPredicted RBP4.49□□□□□ -1.69
SWI1YPL016W UBP10P53874 792 aaPredicted RBP4.49□□□□□ -1.69
SWI1YPL016W SCJ1P25303 377 aa4.49□□□□□ -1.69
SWI1YPL016W RAD2P07276 1031 aa4.48□□□□□ -1.69
SWI1YPL016W PIL1P53252 339 aaKnown RBP4.48□□□□□ -1.69
SWI1YPL016W THI22Q06490 572 aa4.48□□□□□ -1.69
SWI1YPL016W SSA1P10591 642 aaKnown RBP4.48□□□□□ -1.69
SWI1YPL016W SSA2P10592 639 aaKnown RBP4.48□□□□□ -1.69
SWI1YPL016W YGL140CP53120 1219 aa4.48□□□□□ -1.69
SWI1YPL016W TPS3P38426 1054 aaKnown RBP4.48□□□□□ -1.69
SWI1YPL016W VPS72Q03388 795 aa4.48□□□□□ -1.69
SWI1YPL016W CTI6Q08923 506 aa4.48□□□□□ -1.69
SWI1YPL016W YOL087CQ99247 1116 aa4.48□□□□□ -1.69
SWI1YPL016W RAD16P31244 790 aa4.47□□□□□ -1.69
SWI1YPL016W UBP14P38237 781 aaKnown RBP4.47□□□□□ -1.69
SWI1YPL016W CIN4P39110 191 aa4.47□□□□□ -1.69
SWI1YPL016W DSN1P40568 576 aa4.47□□□□□ -1.69
SWI1YPL016W EAF7P53911 425 aaKnown RBP4.47□□□□□ -1.69
SWI1YPL016W SAC3P46674 1301 aa4.47□□□□□ -1.69
SWI1YPL016W VPS27P40343 622 aaKnown RBP4.47□□□□□ -1.69
SWI1YPL016W NOP8Q08287 484 aaPredicted RBP4.47□□□□□ -1.69
SWI1YPL016W NHA1Q99271 985 aa4.47□□□□□ -1.69
SWI1YPL016W RNA1P11745 407 aaKnown RBP4.46□□□□□ -1.69
SWI1YPL016W SMC3P47037 1230 aa4.46□□□□□ -1.69
SWI1YPL016W MAK11P20484 414 aaKnown RBP4.46□□□□□ -1.7
SWI1YPL016W PHO87P25360 923 aa4.46□□□□□ -1.7
SWI1YPL016W YIL092WP40497 633 aa4.46□□□□□ -1.7
SWI1YPL016W SML1Q04964 104 aa4.46□□□□□ -1.7
SWI1YPL016W SPB4P25808 606 aaPredicted RBP4.45□□□□□ -1.7
SWI1YPL016W LSP1Q12230 341 aaKnown RBP4.45□□□□□ -1.7
SWI1YPL016W VPS13Q07878 3144 aa4.45□□□□□ -1.7
SWI1YPL016W MGA2P40578 1113 aa4.45□□□□□ -1.7
SWI1YPL016W TFC8Q12308 588 aa4.45□□□□□ -1.7
SWI1YPL016W NOP58Q12499 511 aaKnown RBP4.45□□□□□ -1.7
SWI1YPL016W SPT5P27692 1063 aaKnown RBP4.45□□□□□ -1.7
SWI1YPL016W RRP14P36080 434 aaKnown RBP4.45□□□□□ -1.7
SWI1YPL016W ARL1P38116 183 aaKnown RBP4.45□□□□□ -1.7
SWI1YPL016W NFI1Q12216 726 aa4.45□□□□□ -1.7
SWI1YPL016W DNM1P54861 757 aa4.44□□□□□ -1.7
SWI1YPL016W MSH1P25846 959 aa4.44□□□□□ -1.7
SWI1YPL016W RKM3P38222 552 aa4.44□□□□□ -1.7
SWI1YPL016W HYR1P40581 163 aaKnown RBP4.44□□□□□ -1.7
SWI1YPL016W SEC9P40357 651 aa4.44□□□□□ -1.7
SWI1YPL016W PDS5Q04264 1277 aa4.44□□□□□ -1.7
SWI1YPL016W GYL1Q04322 720 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms