RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CIT2P08679 460 aa4.12□□□□□ -1.75
MSH2YOL090W SEC2P17065 759 aa4.12□□□□□ -1.75
MSH2YOL090W RAM1P22007 431 aa4.12□□□□□ -1.75
MSH2YOL090W TY1A-DR4O74302 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-HP0C2I4 478 aaKnown RBP4.11□□□□□ -1.75
MSH2YOL090W TY1A-AP0CX57 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-PR1P0CX58 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-ORP0CX59 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-PR2P0CX60 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-DR5P0CX65 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-ER2P0CX66 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-GR3P0CX67 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-LR1P0CX68 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-MR2P0CX69 440 aa4.11□□□□□ -1.75
MSH2YOL090W TSR4P25040 408 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-JR2P47099 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-DR1Q03856 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-ML1Q04706 440 aaKnown RBP4.11□□□□□ -1.75
MSH2YOL090W TY1A-BRQ12217 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-NL2Q12470 440 aa4.11□□□□□ -1.75
MSH2YOL090W TY1A-GR2Q12485 440 aa4.11□□□□□ -1.75
MSH2YOL090W SGS1P35187 1447 aa4.11□□□□□ -1.75
MSH2YOL090W SIS2P36024 562 aa4.11□□□□□ -1.75
MSH2YOL090W JIP5Q06214 492 aaPredicted RBP4.11□□□□□ -1.75
MSH2YOL090W CSC1Q06538 782 aa4.11□□□□□ -1.75
MSH2YOL090W MAK16P10962 306 aaPredicted RBP4.1□□□□□ -1.75
MSH2YOL090W ECM23Q02710 187 aa4.1□□□□□ -1.75
MSH2YOL090W TUM1Q08686 304 aaKnown RBP4.1□□□□□ -1.75
MSH2YOL090W ESC1Q03661 1658 aaKnown RBP4.1□□□□□ -1.75
MSH2YOL090W MET5P47169 1442 aa4.1□□□□□ -1.75
MSH2YOL090W PMC1P38929 1173 aaPredicted RBP4.1□□□□□ -1.75
MSH2YOL090W ALD3P54114 506 aa4.1□□□□□ -1.75
MSH2YOL090W PKH3Q03306 898 aaPredicted RBP4.1□□□□□ -1.75
MSH2YOL090W LTE1P07866 1435 aa4.09□□□□□ -1.75
MSH2YOL090W PPX1P38698 397 aa4.09□□□□□ -1.75
MSH2YOL090W STR2P47164 639 aa4.09□□□□□ -1.75
MSH2YOL090W ALG12P53730 551 aa4.09□□□□□ -1.75
MSH2YOL090W PPG1P32838 368 aa4.09□□□□□ -1.75
MSH2YOL090W GTT3P39996 337 aa4.09□□□□□ -1.75
MSH2YOL090W YJR107WP47145 328 aa4.09□□□□□ -1.75
MSH2YOL090W PML39Q03760 334 aa4.09□□□□□ -1.75
MSH2YOL090W MMP1Q12372 583 aa4.09□□□□□ -1.75
MSH2YOL090W DNF1P32660 1571 aa4.09□□□□□ -1.76
MSH2YOL090W MET1P36150 593 aa4.08□□□□□ -1.76
MSH2YOL090W VAC8P39968 578 aa4.08□□□□□ -1.76
MSH2YOL090W ZDS1P50111 915 aaKnown RBP4.08□□□□□ -1.76
MSH2YOL090W CWC15Q03772 175 aaKnown RBP4.08□□□□□ -1.76
MSH2YOL090W YPR015CQ12531 247 aa4.08□□□□□ -1.76
MSH2YOL090W GRS1P38088 690 aaKnown RBP4.08□□□□□ -1.76
MSH2YOL090W MNL2Q12205 849 aa4.08□□□□□ -1.76
MSH2YOL090W KEX2P13134 814 aa4.07□□□□□ -1.76
MSH2YOL090W GRX4P32642 244 aa4.07□□□□□ -1.76
MSH2YOL090W BUD6P41697 788 aa4.07□□□□□ -1.76
MSH2YOL090W KAR5Q04746 504 aa4.07□□□□□ -1.76
MSH2YOL090W DPL1Q05567 589 aa4.07□□□□□ -1.76
MSH2YOL090W TFB4Q12004 338 aa4.07□□□□□ -1.76
MSH2YOL090W IRC20Q06554 1556 aa4.07□□□□□ -1.76
MSH2YOL090W MET4P32389 672 aa4.07□□□□□ -1.76
MSH2YOL090W YRR1Q12172 810 aa4.07□□□□□ -1.76
MSH2YOL090W FRT1Q99332 602 aa4.07□□□□□ -1.76
MSH2YOL090W FPR3P38911 411 aaKnown RBP4.06□□□□□ -1.76
MSH2YOL090W TIF11P38912 153 aaKnown RBP4.06□□□□□ -1.76
MSH2YOL090W FYV10P40492 516 aa4.06□□□□□ -1.76
MSH2YOL090W PEX29Q03370 554 aa4.06□□□□□ -1.76
MSH2YOL090W YOL057WQ08225 711 aa4.06□□□□□ -1.76
MSH2YOL090W BOL3P39724 118 aa4.06□□□□□ -1.76
MSH2YOL090W ULI1P43604 169 aa4.06□□□□□ -1.76
MSH2YOL090W YPR084WQ06821 456 aa4.06□□□□□ -1.76
MSH2YOL090W SSB1P11484 613 aaKnown RBP4.05□□□□□ -1.76
MSH2YOL090W CLB5P30283 435 aa4.05□□□□□ -1.76
MSH2YOL090W SRP40P32583 406 aaPredicted RBP4.05□□□□□ -1.76
MSH2YOL090W RRP14P36080 434 aaKnown RBP4.05□□□□□ -1.76
MSH2YOL090W UBX7P38349 436 aa4.05□□□□□ -1.76
MSH2YOL090W SSB2P40150 613 aaKnown RBP4.05□□□□□ -1.76
MSH2YOL090W TPM2P40414 161 aa4.05□□□□□ -1.76
MSH2YOL090W KTR7P40504 517 aa4.05□□□□□ -1.76
MSH2YOL090W NMA111P53920 997 aa4.05□□□□□ -1.76
MSH2YOL090W ALD6P54115 500 aaKnown RBP4.05□□□□□ -1.76
MSH2YOL090W ISM1P48526 1002 aa4.05□□□□□ -1.76
MSH2YOL090W RPN4Q03465 531 aa4.05□□□□□ -1.76
MSH2YOL090W SSF2Q12153 453 aaPredicted RBP4.05□□□□□ -1.76
MSH2YOL090W TRM1P15565 570 aaKnown RBP4.04□□□□□ -1.76
MSH2YOL090W ARG8P18544 423 aa4.04□□□□□ -1.76
MSH2YOL090W YKL091CP33324 310 aaKnown RBP4.04□□□□□ -1.76
MSH2YOL090W TFG1P41895 735 aaPredicted RBP4.04□□□□□ -1.76
MSH2YOL090W JIP4Q03361 876 aa4.04□□□□□ -1.76
MSH2YOL090W RPA190P10964 1664 aaKnown RBP4.04□□□□□ -1.76
MSH2YOL090W GAL2P13181 574 aa4.04□□□□□ -1.76
MSH2YOL090W THI12P42883 340 aa4.04□□□□□ -1.76
MSH2YOL090W THI5P43534 340 aa4.04□□□□□ -1.76
MSH2YOL090W THI11P47183 340 aa4.04□□□□□ -1.76
MSH2YOL090W NUT2Q06213 157 aa4.04□□□□□ -1.76
MSH2YOL090W THI13Q07748 340 aa4.04□□□□□ -1.76
MSH2YOL090W SPT5P27692 1063 aaKnown RBP4.04□□□□□ -1.76
MSH2YOL090W LDB19Q12502 818 aa4.04□□□□□ -1.76
MSH2YOL090W YNL115CP53925 644 aa4.03□□□□□ -1.76
MSH2YOL090W NSE3Q05541 303 aa4.03□□□□□ -1.76
MSH2YOL090W SLY41P22215 453 aa4.03□□□□□ -1.76
MSH2YOL090W ATG1P53104 897 aa4.03□□□□□ -1.76
MSH2YOL090W VPS16Q03308 798 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms