RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W AFT1P22149 690 aa8.54□□□□□ -1.04
SSU72YNL222W ASH1P34233 588 aa8.54□□□□□ -1.04
SSU72YNL222W HGH1P48362 394 aaKnown RBP8.52□□□□□ -1.05
SSU72YNL222W YJL007CP47080 104 aa8.51□□□□□ -1.05
SSU72YNL222W NAF1P53919 492 aaKnown RBP8.51□□□□□ -1.05
SSU72YNL222W YDJ1P25491 409 aaKnown RBP8.5□□□□□ -1.05
SSU72YNL222W YPR084WQ06821 456 aa8.5□□□□□ -1.05
SSU72YNL222W SPT5P27692 1063 aaKnown RBP8.49□□□□□ -1.05
SSU72YNL222W APP1P53933 587 aa8.48□□□□□ -1.05
SSU72YNL222W MRT4P33201 236 aaKnown RBP8.47□□□□□ -1.05
SSU72YNL222W YNL108CP53929 270 aa8.47□□□□□ -1.05
SSU72YNL222W GAR1P28007 205 aaKnown RBP8.46□□□□□ -1.06
SSU72YNL222W GUT2P32191 649 aa8.46□□□□□ -1.06
SSU72YNL222W ISF1P32488 338 aa8.45□□□□□ -1.06
SSU72YNL222W BIM1P40013 344 aa8.45□□□□□ -1.06
SSU72YNL222W MCM16Q12262 181 aa8.45□□□□□ -1.06
SSU72YNL222W RGA1P39083 1007 aa8.44□□□□□ -1.06
SSU72YNL222W GBP2P25555 427 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
SSU72YNL222W MET22P32179 357 aa8.43□□□□□ -1.06
SSU72YNL222W ATG32P40458 529 aa8.43□□□□□ -1.06
SSU72YNL222W STE20Q03497 939 aaKnown RBP8.43□□□□□ -1.06
SSU72YNL222W EMW1P42842 904 aaKnown RBP8.42□□□□□ -1.06
SSU72YNL222W EMP47P43555 445 aa8.42□□□□□ -1.06
SSU72YNL222W YJR115WP47152 169 aa8.42□□□□□ -1.06
SSU72YNL222W MSB3P48566 633 aaPredicted RBP8.42□□□□□ -1.06
SSU72YNL222W FRA1Q07825 749 aa8.42□□□□□ -1.06
SSU72YNL222W ENV9Q08651 330 aa8.42□□□□□ -1.06
SSU72YNL222W ENO2P00925 437 aaKnown RBP8.41□□□□□ -1.06
SSU72YNL222W SUP45P12385 437 aaKnown RBP8.41□□□□□ -1.06
SSU72YNL222W UGA3P26370 528 aa8.4□□□□□ -1.06
SSU72YNL222W YBL086CP38177 466 aa8.39□□□□□ -1.07
SSU72YNL222W YDR444WQ04093 687 aa8.39□□□□□ -1.07
SSU72YNL222W TIF1P10081 395 aaKnown RBP8.37□□□□□ -1.07
SSU72YNL222W RPL34BP40525 121 aaKnown RBP8.37□□□□□ -1.07
SSU72YNL222W MKS1P34072 584 aa8.36□□□□□ -1.07
SSU72YNL222W YPL062WQ02781 134 aa8.36□□□□□ -1.07
SSU72YNL222W RTT106P40161 455 aa8.35□□□□□ -1.07
SSU72YNL222W YPP1P46951 817 aa8.35□□□□□ -1.07
SSU72YNL222W RIM21P48565 533 aa8.35□□□□□ -1.07
SSU72YNL222W LCB5Q06147 687 aaKnown RBP8.35□□□□□ -1.07
SSU72YNL222W SRF1Q12516 437 aa8.35□□□□□ -1.07
SSU72YNL222W MRX12P47084 519 aa8.34□□□□□ -1.07
SSU72YNL222W PTK2P47116 818 aaKnown RBP8.34□□□□□ -1.07
SSU72YNL222W ATG20Q07528 640 aa8.34□□□□□ -1.07
SSU72YNL222W DFG5Q05031 458 aa8.33□□□□□ -1.08
SSU72YNL222W RTG2P32608 588 aaKnown RBP8.32□□□□□ -1.08
SSU72YNL222W APL6P46682 809 aa8.32□□□□□ -1.08
SSU72YNL222W FBP26P32604 452 aa8.31□□□□□ -1.08
SSU72YNL222W ENO1P00924 437 aaKnown RBP8.3□□□□□ -1.08
SSU72YNL222W ISR1Q06098 443 aaKnown RBP8.3□□□□□ -1.08
SSU72YNL222W YPR204WQ08995 1032 aa8.3□□□□□ -1.08
SSU72YNL222W RDS2P19541 446 aaKnown RBP8.28□□□□□ -1.08
SSU72YNL222W SOH1P38633 127 aa8.28□□□□□ -1.08
SSU72YNL222W AAD14P42884 376 aa8.28□□□□□ -1.08
SSU72YNL222W MRX10Q05648 414 aa8.28□□□□□ -1.08
SSU72YNL222W HAL5P38970 855 aaKnown RBP8.27□□□□□ -1.09
SSU72YNL222W BDS1Q08347 646 aa8.27□□□□□ -1.09
SSU72YNL222W ARG82P07250 355 aa8.26□□□□□ -1.09
SSU72YNL222W ATG3P40344 310 aa8.26□□□□□ -1.09
SSU72YNL222W ISU1Q03020 165 aa8.26□□□□□ -1.09
SSU72YNL222W YLR346CQ06139 101 aa8.26□□□□□ -1.09
SSU72YNL222W STE6P12866 1290 aa8.25□□□□□ -1.09
SSU72YNL222W NUP85P46673 744 aa8.24□□□□□ -1.09
SSU72YNL222W DLD1P32891 587 aa8.23□□□□□ -1.09
SSU72YNL222W RGA2Q06407 1009 aa8.23□□□□□ -1.09
SSU72YNL222W OPT2Q06593 877 aa8.23□□□□□ -1.09
SSU72YNL222W UTP13Q05946 817 aaKnown RBP8.22□□□□□ -1.09
SSU72YNL222W UTR2P32623 467 aa8.19□□□□□ -1.1
SSU72YNL222W YDL176WQ12027 708 aa8.19□□□□□ -1.1
SSU72YNL222W MIP1P15801 1254 aa8.18□□□□□ -1.1
SSU72YNL222W LSC2P53312 427 aa8.18□□□□□ -1.1
SSU72YNL222W WTM2Q12206 467 aa8.18□□□□□ -1.1
SSU72YNL222W SPT2P06843 333 aaPredicted RBP8.17□□□□□ -1.1
SSU72YNL222W DAT1P13483 248 aaKnown RBP8.17□□□□□ -1.1
SSU72YNL222W GLY1P37303 387 aaKnown RBP8.17□□□□□ -1.1
SSU72YNL222W YJR098CP47139 656 aa8.17□□□□□ -1.1
SSU72YNL222W HDA3Q06623 655 aa8.17□□□□□ -1.1
SSU72YNL222W RPP2BP02400 110 aaKnown RBP8.16□□□□□ -1.1
SSU72YNL222W PEP12P32854 288 aa8.16□□□□□ -1.1
SSU72YNL222W DLD3P39976 496 aaKnown RBP8.16□□□□□ -1.1
SSU72YNL222W KTR7P40504 517 aa8.16□□□□□ -1.1
SSU72YNL222W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SSU72YNL222W SCW11P53189 542 aa8.15□□□□□ -1.1
SSU72YNL222W CAF120P53836 1060 aa8.15□□□□□ -1.1
SSU72YNL222W ACO2P39533 789 aa8.14□□□□□ -1.11
SSU72YNL222W TTI1P36097 1038 aa8.13□□□□□ -1.11
SSU72YNL222W TBS1P38114 1094 aa8.13□□□□□ -1.11
SSU72YNL222W TCB1Q12466 1186 aa8.13□□□□□ -1.11
SSU72YNL222W UBP2Q01476 1272 aa8.12□□□□□ -1.11
SSU72YNL222W SIS2P36024 562 aa8.11□□□□□ -1.11
SSU72YNL222W AIM9P40053 627 aaKnown RBP8.11□□□□□ -1.11
SSU72YNL222W SLX8P40072 274 aa8.11□□□□□ -1.11
SSU72YNL222W TY1A-BLQ12266 440 aa8.11□□□□□ -1.11
SSU72YNL222W CPS1P27614 576 aa8.1□□□□□ -1.11
SSU72YNL222W UTP7P40055 554 aaKnown RBP8.1□□□□□ -1.11
SSU72YNL222W PDI1P17967 522 aaKnown RBP8.08□□□□□ -1.12
SSU72YNL222W RLF2Q12495 606 aa8.07□□□□□ -1.12
SSU72YNL222W SWI5P08153 709 aa8.06□□□□□ -1.12
SSU72YNL222W YIR007WP40566 764 aa8.06□□□□□ -1.12
SSU72YNL222W YFL034WP43564 1073 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 105.4 ms