RNA–Protein interactions for RNA: YNL030W

HHF2, Transcript of Histone H4, yeast

Gene HHF2, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHF2	YNL030W	TEC1	P18412	486 aa		5.03	□□□□□ -1.6
HHF2	YNL030W	SPT5	P27692	1063 aa	Known RBP	5.02	□□□□□ -1.61
HHF2	YNL030W	KIP2	P28743	706 aa		5.02	□□□□□ -1.61
HHF2	YNL030W	YPR204W	Q08995	1032 aa		5.02	□□□□□ -1.61
HHF2	YNL030W	MCM16	Q12262	181 aa		5.02	□□□□□ -1.61
HHF2	YNL030W	RTG2	P32608	588 aa	Known RBP	5.01	□□□□□ -1.61
HHF2	YNL030W	EMP47	P43555	445 aa		5.01	□□□□□ -1.61
HHF2	YNL030W	NAF1	P53919	492 aa	Known RBP	5.01	□□□□□ -1.61
HHF2	YNL030W	APP1	P53933	587 aa		5.01	□□□□□ -1.61
HHF2	YNL030W	SRC1	Q03707	834 aa		5.01	□□□□□ -1.61
HHF2	YNL030W	ENO1	P00924	437 aa	Known RBP	5	□□□□□ -1.61
HHF2	YNL030W	IXR1	P33417	597 aa		5	□□□□□ -1.61
HHF2	YNL030W	RPL34B	P40525	121 aa	Known RBP	5	□□□□□ -1.61
HHF2	YNL030W	SYH1	Q02875	849 aa	Known RBP	5	□□□□□ -1.61
HHF2	YNL030W	RIM21	P48565	533 aa		4.99	□□□□□ -1.61
HHF2	YNL030W	HED1	Q03937	162 aa		4.99	□□□□□ -1.61
HHF2	YNL030W	MET32	Q12041	191 aa		4.99	□□□□□ -1.61
HHF2	YNL030W	RDS2	P19541	446 aa	Known RBP	4.98	□□□□□ -1.61
HHF2	YNL030W	GUT2	P32191	649 aa		4.98	□□□□□ -1.61
HHF2	YNL030W	STE20	Q03497	939 aa	Known RBP	4.97	□□□□□ -1.61
HHF2	YNL030W	MRX10	Q05648	414 aa		4.97	□□□□□ -1.61
HHF2	YNL030W	FRA1	Q07825	749 aa		4.97	□□□□□ -1.61
HHF2	YNL030W	RLF2	Q12495	606 aa		4.96	□□□□□ -1.62
HHF2	YNL030W	AIM44	Q99299	758 aa		4.95	□□□□□ -1.62
HHF2	YNL030W	CDC4	P07834	779 aa		4.94	□□□□□ -1.62
HHF2	YNL030W	CPS1	P27614	576 aa		4.93	□□□□□ -1.62
HHF2	YNL030W	MRT4	P33201	236 aa	Known RBP	4.93	□□□□□ -1.62
HHF2	YNL030W	SOH1	P38633	127 aa		4.93	□□□□□ -1.62
HHF2	YNL030W	HAL5	P38970	855 aa	Known RBP	4.93	□□□□□ -1.62
HHF2	YNL030W	EMW1	P42842	904 aa	Known RBP	4.93	□□□□□ -1.62
HHF2	YNL030W	APL6	P46682	809 aa		4.93	□□□□□ -1.62
HHF2	YNL030W	ASH1	P34233	588 aa		4.92	□□□□□ -1.62
HHF2	YNL030W	KTR7	P40504	517 aa		4.92	□□□□□ -1.62
HHF2	YNL030W	YPP1	P46951	817 aa		4.92	□□□□□ -1.62
HHF2	YNL030W	TRK1	P12685	1235 aa		4.91	□□□□□ -1.62
HHF2	YNL030W	TTI1	P36097	1038 aa		4.91	□□□□□ -1.62
HHF2	YNL030W	YBL086C	P38177	466 aa		4.91	□□□□□ -1.62
HHF2	YNL030W	ISR1	Q06098	443 aa	Known RBP	4.91	□□□□□ -1.62
HHF2	YNL030W	ATG20	Q07528	640 aa		4.91	□□□□□ -1.62
HHF2	YNL030W	PEP12	P32854	288 aa		4.9	□□□□□ -1.63
HHF2	YNL030W	MKS1	P34072	584 aa		4.9	□□□□□ -1.63
HHF2	YNL030W	DFG5	Q05031	458 aa		4.9	□□□□□ -1.63
HHF2	YNL030W	ENV9	Q08651	330 aa		4.9	□□□□□ -1.63
HHF2	YNL030W	AFT1	P22149	690 aa		4.89	□□□□□ -1.63
HHF2	YNL030W	MRX12	P47084	519 aa		4.89	□□□□□ -1.63
HHF2	YNL030W	HST3	P53687	447 aa		4.88	□□□□□ -1.63
HHF2	YNL030W	FBP26	P32604	452 aa		4.87	□□□□□ -1.63
HHF2	YNL030W	MIP1	P15801	1254 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	UGA3	P26370	528 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	TGL4	P36165	910 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	YJR115W	P47152	169 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	ISU1	Q03020	165 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	YML083C	Q04526	418 aa		4.86	□□□□□ -1.63
HHF2	YNL030W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HHF2	YNL030W	PUP1	P25043	261 aa		4.85	□□□□□ -1.63
HHF2	YNL030W	ATG3	P40344	310 aa		4.85	□□□□□ -1.63
HHF2	YNL030W	HDA3	Q06623	655 aa		4.85	□□□□□ -1.63
HHF2	YNL030W	SUB2	Q07478	446 aa	Known RBP	4.85	□□□□□ -1.63
HHF2	YNL030W	STE6	P12866	1290 aa		4.84	□□□□□ -1.63
HHF2	YNL030W	BRE2	P43132	505 aa		4.84	□□□□□ -1.63
HHF2	YNL030W	MSB3	P48566	633 aa	Predicted RBP	4.84	□□□□□ -1.63
HHF2	YNL030W	UTP13	Q05946	817 aa	Known RBP	4.84	□□□□□ -1.63
HHF2	YNL030W	NOB1	Q08444	459 aa	Known RBP	4.84	□□□□□ -1.63
HHF2	YNL030W	PDI1	P17967	522 aa	Known RBP	4.83	□□□□□ -1.64
HHF2	YNL030W	PTK2	P47116	818 aa	Known RBP	4.83	□□□□□ -1.64
HHF2	YNL030W	ECM23	Q02710	187 aa		4.83	□□□□□ -1.64
HHF2	YNL030W	SSA4	P22202	642 aa	Known RBP	4.82	□□□□□ -1.64
HHF2	YNL030W	UTR2	P32623	467 aa		4.82	□□□□□ -1.64
HHF2	YNL030W	DLD1	P32891	587 aa		4.82	□□□□□ -1.64
HHF2	YNL030W	AAD14	P42884	376 aa		4.82	□□□□□ -1.64
HHF2	YNL030W	ACS2	P52910	683 aa	Known RBP	4.82	□□□□□ -1.64
HHF2	YNL030W	BDS1	Q08347	646 aa		4.82	□□□□□ -1.64
HHF2	YNL030W	DAT1	P13483	248 aa	Known RBP	4.81	□□□□□ -1.64
HHF2	YNL030W	SIS2	P36024	562 aa		4.81	□□□□□ -1.64
HHF2	YNL030W	AIM9	P40053	627 aa	Known RBP	4.81	□□□□□ -1.64
HHF2	YNL030W	UTP7	P40055	554 aa	Known RBP	4.81	□□□□□ -1.64
HHF2	YNL030W	WTM2	Q12206	467 aa		4.81	□□□□□ -1.64
HHF2	YNL030W	SPT2	P06843	333 aa	Predicted RBP	4.8	□□□□□ -1.64
HHF2	YNL030W	GAL2	P13181	574 aa		4.8	□□□□□ -1.64
HHF2	YNL030W	SLX8	P40072	274 aa		4.8	□□□□□ -1.64
HHF2	YNL030W	SRF1	Q12516	437 aa		4.8	□□□□□ -1.64
HHF2	YNL030W	SWI5	P08153	709 aa		4.79	□□□□□ -1.64
HHF2	YNL030W	PHO87	P25360	923 aa		4.79	□□□□□ -1.64
HHF2	YNL030W	ROM1	P53046	1155 aa		4.79	□□□□□ -1.64
HHF2	YNL030W	ARG82	P07250	355 aa		4.78	□□□□□ -1.64
HHF2	YNL030W	NTH2	P35172	780 aa		4.78	□□□□□ -1.64
HHF2	YNL030W	UBX7	P38349	436 aa		4.78	□□□□□ -1.64
HHF2	YNL030W	TSC13	Q99190	310 aa		4.78	□□□□□ -1.64
HHF2	YNL030W	RPS6A	P0CX37	236 aa	Known RBP	4.77	□□□□□ -1.65
HHF2	YNL030W	RPS6B	P0CX38	236 aa	Predicted RBP	4.77	□□□□□ -1.65
HHF2	YNL030W	TBS1	P38114	1094 aa		4.76	□□□□□ -1.65
HHF2	YNL030W	DLD3	P39976	496 aa	Known RBP	4.76	□□□□□ -1.65
HHF2	YNL030W	YJR098C	P47139	656 aa		4.76	□□□□□ -1.65
HHF2	YNL030W	GCR2	Q01722	534 aa		4.76	□□□□□ -1.65
HHF2	YNL030W	HAP4	P14064	554 aa		4.75	□□□□□ -1.65
HHF2	YNL030W	RTT106	P40161	455 aa		4.75	□□□□□ -1.65
HHF2	YNL030W	NUP85	P46673	744 aa		4.75	□□□□□ -1.65
HHF2	YNL030W	CYT1	P07143	309 aa		4.74	□□□□□ -1.65
HHF2	YNL030W	NAP1	P25293	417 aa	Known RBP	4.74	□□□□□ -1.65
HHF2	YNL030W	MET22	P32179	357 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms