RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C LSC2P53312 427 aa1.31□□□□□ -2.2
RKR1YMR247C MOD5P07884 428 aa1.31□□□□□ -2.2
RKR1YMR247C STE6P12866 1290 aa1.31□□□□□ -2.2
RKR1YMR247C MET1P36150 593 aa1.31□□□□□ -2.2
RKR1YMR247C TFB3Q03290 321 aa1.31□□□□□ -2.2
RKR1YMR247C DIT2P21595 489 aa1.31□□□□□ -2.2
RKR1YMR247C SLY41P22215 453 aa1.31□□□□□ -2.2
RKR1YMR247C SHU2P38957 223 aa1.31□□□□□ -2.2
RKR1YMR247C ENV9Q08651 330 aa1.31□□□□□ -2.2
RKR1YMR247C TUM1Q08686 304 aaKnown RBP1.31□□□□□ -2.2
RKR1YMR247C RAD59Q12223 238 aa1.31□□□□□ -2.2
RKR1YMR247C SUP45P12385 437 aaKnown RBP1.3□□□□□ -2.2
RKR1YMR247C TRK1P12685 1235 aa1.3□□□□□ -2.2
RKR1YMR247C IXR1P33417 597 aa1.3□□□□□ -2.2
RKR1YMR247C APL6P46682 809 aa1.3□□□□□ -2.2
RKR1YMR247C GCD11P32481 527 aaKnown RBP1.3□□□□□ -2.2
RKR1YMR247C FBP26P32604 452 aa1.3□□□□□ -2.2
RKR1YMR247C GLC3P32775 704 aa1.3□□□□□ -2.2
RKR1YMR247C YTA6P40328 754 aa1.3□□□□□ -2.2
RKR1YMR247C UBP15P50101 1230 aa1.3□□□□□ -2.2
RKR1YMR247C FRK1Q03002 865 aaPredicted RBP1.3□□□□□ -2.2
RKR1YMR247C CDC73Q06697 393 aa1.3□□□□□ -2.2
RKR1YMR247C PHM7Q12252 991 aa1.3□□□□□ -2.2
RKR1YMR247C DPS1P04802 557 aaKnown RBP1.3□□□□□ -2.2
RKR1YMR247C PDC1P06169 563 aaKnown RBP1.3□□□□□ -2.2
RKR1YMR247C SMC1P32908 1225 aa1.3□□□□□ -2.2
RKR1YMR247C YBL086CP38177 466 aa1.3□□□□□ -2.2
RKR1YMR247C NIS1P53939 407 aa1.3□□□□□ -2.2
RKR1YMR247C UFD2P54860 961 aa1.3□□□□□ -2.2
RKR1YMR247C BUD20Q08004 166 aaPredicted RBP1.3□□□□□ -2.2
RKR1YMR247C KIP2P28743 706 aa1.3□□□□□ -2.2
RKR1YMR247C BRE2P43132 505 aa1.3□□□□□ -2.2
RKR1YMR247C SRS2P12954 1174 aa1.29□□□□□ -2.2
RKR1YMR247C TRM1P15565 570 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C PKH3Q03306 898 aaPredicted RBP1.29□□□□□ -2.2
RKR1YMR247C PIB1Q06651 286 aa1.29□□□□□ -2.2
RKR1YMR247C BDS1Q08347 646 aa1.29□□□□□ -2.2
RKR1YMR247C SRF1Q12516 437 aa1.29□□□□□ -2.2
RKR1YMR247C YDR461C-AQ2V2P7 80 aa1.29□□□□□ -2.2
RKR1YMR247C KAR2P16474 682 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C ARG8P18544 423 aa1.29□□□□□ -2.2
RKR1YMR247C VAN1P23642 535 aa1.29□□□□□ -2.2
RKR1YMR247C DYS1P38791 387 aa1.29□□□□□ -2.2
RKR1YMR247C ILV3P39522 585 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C ACF4P47129 309 aa1.29□□□□□ -2.2
RKR1YMR247C ISU1Q03020 165 aa1.29□□□□□ -2.2
RKR1YMR247C YOR059CQ08448 450 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C TSC13Q99190 310 aa1.29□□□□□ -2.2
RKR1YMR247C SSA1P10591 642 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C STM1P39015 273 aaKnown RBP1.29□□□□□ -2.2
RKR1YMR247C AHP1P38013 176 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C RIM21P48565 533 aa1.28□□□□□ -2.2
RKR1YMR247C SKP1P52286 194 aa1.28□□□□□ -2.2
RKR1YMR247C GUP1P53154 560 aa1.28□□□□□ -2.2
RKR1YMR247C UGA3P26370 528 aa1.28□□□□□ -2.2
RKR1YMR247C GCD6P32501 712 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C UTR2P32623 467 aa1.28□□□□□ -2.2
RKR1YMR247C ACO2P39533 789 aa1.28□□□□□ -2.2
RKR1YMR247C YER156CP40093 338 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C TUB4P53378 473 aa1.28□□□□□ -2.2
RKR1YMR247C AGE1Q04412 482 aa1.28□□□□□ -2.2
RKR1YMR247C ATG20Q07528 640 aa1.28□□□□□ -2.2
RKR1YMR247C THS1P04801 734 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C NGR1P32831 672 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C MKS1P34072 584 aa1.28□□□□□ -2.2
RKR1YMR247C GEF1P37020 779 aa1.28□□□□□ -2.2
RKR1YMR247C STR2P47164 639 aa1.28□□□□□ -2.2
RKR1YMR247C RPL34AP87262 121 aaPredicted RBP1.28□□□□□ -2.2
RKR1YMR247C LCB5Q06147 687 aaKnown RBP1.28□□□□□ -2.2
RKR1YMR247C MIP1P15801 1254 aa1.28□□□□□ -2.21
RKR1YMR247C SFA1P32771 386 aa1.28□□□□□ -2.21
RKR1YMR247C RRN7P40992 514 aa1.28□□□□□ -2.21
RKR1YMR247C SUM1P46676 1062 aa1.28□□□□□ -2.21
RKR1YMR247C ISM1P48526 1002 aa1.28□□□□□ -2.21
RKR1YMR247C SCW11P53189 542 aa1.28□□□□□ -2.21
RKR1YMR247C ADE12P80210 433 aaKnown RBP1.28□□□□□ -2.21
RKR1YMR247C RKM2Q03942 479 aa1.28□□□□□ -2.21
RKR1YMR247C SAM37P50110 327 aa1.27□□□□□ -2.21
RKR1YMR247C MRX10Q05648 414 aa1.27□□□□□ -2.21
RKR1YMR247C NOP8Q08287 484 aaPredicted RBP1.27□□□□□ -2.21
RKR1YMR247C NSI1Q12457 570 aa1.27□□□□□ -2.21
RKR1YMR247C PEP12P32854 288 aa1.27□□□□□ -2.21
RKR1YMR247C PPX1P38698 397 aa1.27□□□□□ -2.21
RKR1YMR247C AAD14P42884 376 aa1.27□□□□□ -2.21
RKR1YMR247C YDL206WQ12424 762 aa1.27□□□□□ -2.21
RKR1YMR247C LEU1P07264 779 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C CDC3P32457 520 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C VPS35P34110 944 aa1.27□□□□□ -2.21
RKR1YMR247C GUA1P38625 525 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C MID1P41821 548 aa1.27□□□□□ -2.21
RKR1YMR247C ATG1P53104 897 aa1.27□□□□□ -2.21
RKR1YMR247C TYW1Q08960 810 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C TY1A-DR4O74302 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-HP0C2I4 478 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C TY1A-AP0CX57 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-PR1P0CX58 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-ORP0CX59 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-PR2P0CX60 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-DR5P0CX65 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-ER2P0CX66 440 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms