RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TEC1P18412 486 aa7.43□□□□□ -1.22
SUB1YMR039C YBL036CP38197 257 aa7.43□□□□□ -1.22
SUB1YMR039C SPT5P27692 1063 aaKnown RBP7.41□□□□□ -1.22
SUB1YMR039C RTT106P40161 455 aa7.41□□□□□ -1.22
SUB1YMR039C MSB3P48566 633 aaPredicted RBP7.41□□□□□ -1.22
SUB1YMR039C PKC1P24583 1151 aa7.4□□□□□ -1.22
SUB1YMR039C YPR084WQ06821 456 aa7.4□□□□□ -1.22
SUB1YMR039C HGH1P48362 394 aaKnown RBP7.39□□□□□ -1.23
SUB1YMR039C EMW1P42842 904 aaKnown RBP7.38□□□□□ -1.23
SUB1YMR039C UGA3P26370 528 aa7.37□□□□□ -1.23
SUB1YMR039C GUT2P32191 649 aa7.37□□□□□ -1.23
SUB1YMR039C YPL062WQ02781 134 aa7.36□□□□□ -1.23
SUB1YMR039C YBL086CP38177 466 aa7.35□□□□□ -1.23
SUB1YMR039C YJR115WP47152 169 aa7.35□□□□□ -1.23
SUB1YMR039C FRA1Q07825 749 aa7.35□□□□□ -1.23
SUB1YMR039C BIO2P32451 375 aa7.34□□□□□ -1.23
SUB1YMR039C ITT1Q04638 464 aa7.34□□□□□ -1.23
SUB1YMR039C APP1P53933 587 aa7.33□□□□□ -1.24
SUB1YMR039C STE20Q03497 939 aaKnown RBP7.33□□□□□ -1.24
SUB1YMR039C YDJ1P25491 409 aaKnown RBP7.32□□□□□ -1.24
SUB1YMR039C MRX12P47084 519 aa7.32□□□□□ -1.24
SUB1YMR039C PTK2P47116 818 aaKnown RBP7.31□□□□□ -1.24
SUB1YMR039C MCM16Q12262 181 aa7.31□□□□□ -1.24
SUB1YMR039C MET22P32179 357 aa7.3□□□□□ -1.24
SUB1YMR039C ENV9Q08651 330 aa7.3□□□□□ -1.24
SUB1YMR039C SUP45P12385 437 aaKnown RBP7.29□□□□□ -1.24
SUB1YMR039C MKS1P34072 584 aa7.29□□□□□ -1.24
SUB1YMR039C YPP1P46951 817 aa7.29□□□□□ -1.24
SUB1YMR039C YJL007CP47080 104 aa7.29□□□□□ -1.24
SUB1YMR039C SRF1Q12516 437 aa7.29□□□□□ -1.24
SUB1YMR039C EMP47P43555 445 aa7.28□□□□□ -1.24
SUB1YMR039C YNL108CP53929 270 aa7.28□□□□□ -1.24
SUB1YMR039C FBP26P32604 452 aa7.27□□□□□ -1.25
SUB1YMR039C APL6P46682 809 aa7.27□□□□□ -1.25
SUB1YMR039C ARG82P07250 355 aa7.26□□□□□ -1.25
SUB1YMR039C AAD14P42884 376 aa7.26□□□□□ -1.25
SUB1YMR039C NUP85P46673 744 aa7.26□□□□□ -1.25
SUB1YMR039C YDR444WQ04093 687 aa7.26□□□□□ -1.25
SUB1YMR039C LCB5Q06147 687 aaKnown RBP7.26□□□□□ -1.25
SUB1YMR039C ATG20Q07528 640 aa7.26□□□□□ -1.25
SUB1YMR039C ISF1P32488 338 aa7.25□□□□□ -1.25
SUB1YMR039C ENO2P00925 437 aaKnown RBP7.24□□□□□ -1.25
SUB1YMR039C STE6P12866 1290 aa7.24□□□□□ -1.25
SUB1YMR039C BIM1P40013 344 aa7.24□□□□□ -1.25
SUB1YMR039C DFG5Q05031 458 aa7.24□□□□□ -1.25
SUB1YMR039C DMA2P53924 522 aa7.23□□□□□ -1.25
SUB1YMR039C GAR1P28007 205 aaKnown RBP7.22□□□□□ -1.25
SUB1YMR039C ATG3P40344 310 aa7.22□□□□□ -1.25
SUB1YMR039C RIM21P48565 533 aa7.22□□□□□ -1.25
SUB1YMR039C ISU1Q03020 165 aa7.22□□□□□ -1.25
SUB1YMR039C UTP13Q05946 817 aaKnown RBP7.22□□□□□ -1.25
SUB1YMR039C YLR346CQ06139 101 aa7.22□□□□□ -1.25
SUB1YMR039C BDS1Q08347 646 aa7.22□□□□□ -1.25
SUB1YMR039C ATG32P40458 529 aa7.21□□□□□ -1.26
SUB1YMR039C TIF1P10081 395 aaKnown RBP7.2□□□□□ -1.26
SUB1YMR039C OPT2Q06593 877 aa7.2□□□□□ -1.26
SUB1YMR039C RPP2BP02400 110 aaKnown RBP7.19□□□□□ -1.26
SUB1YMR039C LSC2P53312 427 aa7.19□□□□□ -1.26
SUB1YMR039C ISR1Q06098 443 aaKnown RBP7.19□□□□□ -1.26
SUB1YMR039C GLY1P37303 387 aaKnown RBP7.18□□□□□ -1.26
SUB1YMR039C RPL34BP40525 121 aaKnown RBP7.18□□□□□ -1.26
SUB1YMR039C YJR098CP47139 656 aa7.17□□□□□ -1.26
SUB1YMR039C MRX10Q05648 414 aa7.17□□□□□ -1.26
SUB1YMR039C MIP1P15801 1254 aa7.16□□□□□ -1.26
SUB1YMR039C GBP2P25555 427 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26 RIP-Chip
SUB1YMR039C RTG2P32608 588 aaKnown RBP7.16□□□□□ -1.26
SUB1YMR039C SPT2P06843 333 aaPredicted RBP7.15□□□□□ -1.26
SUB1YMR039C RDS2P19541 446 aaKnown RBP7.15□□□□□ -1.26
SUB1YMR039C DLD1P32891 587 aa7.15□□□□□ -1.26
SUB1YMR039C SOH1P38633 127 aa7.15□□□□□ -1.26
SUB1YMR039C HAL5P38970 855 aaKnown RBP7.15□□□□□ -1.26
SUB1YMR039C UBP2Q01476 1272 aa7.14□□□□□ -1.27
SUB1YMR039C ENO1P00924 437 aaKnown RBP7.13□□□□□ -1.27
SUB1YMR039C SCW11P53189 542 aa7.13□□□□□ -1.27
SUB1YMR039C UTR2P32623 467 aa7.12□□□□□ -1.27
SUB1YMR039C ACO2P39533 789 aa7.12□□□□□ -1.27
SUB1YMR039C DLD3P39976 496 aaKnown RBP7.12□□□□□ -1.27
SUB1YMR039C TY1A-BLQ12266 440 aa7.12□□□□□ -1.27
SUB1YMR039C YDL176WQ12027 708 aa7.11□□□□□ -1.27
SUB1YMR039C VTC4P47075 721 aa7.1□□□□□ -1.27
SUB1YMR039C HDA3Q06623 655 aa7.1□□□□□ -1.27
SUB1YMR039C WTM2Q12206 467 aa7.1□□□□□ -1.27
SUB1YMR039C TCB1Q12466 1186 aa7.1□□□□□ -1.27
SUB1YMR039C DAT1P13483 248 aaKnown RBP7.09□□□□□ -1.27
SUB1YMR039C TBS1P38114 1094 aa7.09□□□□□ -1.27
SUB1YMR039C YPR204WQ08995 1032 aa7.09□□□□□ -1.27
SUB1YMR039C PEP12P32854 288 aa7.08□□□□□ -1.28
SUB1YMR039C SIS2P36024 562 aa7.08□□□□□ -1.28
SUB1YMR039C SLX8P40072 274 aa7.07□□□□□ -1.28
SUB1YMR039C DAL1P32375 460 aa7.06□□□□□ -1.28
SUB1YMR039C CAF120P53836 1060 aa7.06□□□□□ -1.28
SUB1YMR039C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
SUB1YMR039C OSH7P38755 437 aa7.05□□□□□ -1.28
SUB1YMR039C MSN5P52918 1224 aa7.04□□□□□ -1.28
SUB1YMR039C AIM9P40053 627 aaKnown RBP7.03□□□□□ -1.28
SUB1YMR039C YIR007WP40566 764 aa7.03□□□□□ -1.28
SUB1YMR039C YFL034WP43564 1073 aa7.03□□□□□ -1.28
SUB1YMR039C SSN3P39073 555 aa7.02□□□□□ -1.29
SUB1YMR039C SUM1P46676 1062 aa7.02□□□□□ -1.29
SUB1YMR039C CDC19P00549 500 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 93.7 ms