RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W MCX1P38323 520 aaPredicted RBP2.94□□□□□ -1.94
SLX4YLR135W YDR090CQ03193 310 aa2.94□□□□□ -1.94
SLX4YLR135W AMN1P38285 549 aaPredicted RBP2.93□□□□□ -1.94
SLX4YLR135W ORC6P38826 435 aa2.93□□□□□ -1.94
SLX4YLR135W SBE2P42223 864 aaKnown RBP2.92□□□□□ -1.94
SLX4YLR135W AGE1Q04412 482 aa2.92□□□□□ -1.94
SLX4YLR135W TAT1P38085 619 aa2.91□□□□□ -1.94
SLX4YLR135W SET1P38827 1080 aaKnown RBP2.91□□□□□ -1.94
SLX4YLR135W AVT1P47082 602 aa2.91□□□□□ -1.94
SLX4YLR135W DMA1P38823 416 aa2.91□□□□□ -1.94
SLX4YLR135W ALO1P54783 526 aaKnown RBP2.9□□□□□ -1.95
SLX4YLR135W RTF1P53064 558 aa2.89□□□□□ -1.95
SLX4YLR135W CUZ1P53899 274 aa2.87□□□□□ -1.95
SLX4YLR135W RGR1P19263 1082 aa2.86□□□□□ -1.95
SLX4YLR135W BOI2P39969 1040 aa2.86□□□□□ -1.95
SLX4YLR135W MET1P36150 593 aa2.85□□□□□ -1.95
SLX4YLR135W PDC1P06169 563 aaKnown RBP2.85□□□□□ -1.95
SLX4YLR135W YCK2P23292 546 aaKnown RBP2.85□□□□□ -1.95
SLX4YLR135W YDR215CQ12240 137 aa2.85□□□□□ -1.95
SLX4YLR135W YNL115CP53925 644 aa2.84□□□□□ -1.95
SLX4YLR135W AOS1Q06624 347 aa2.84□□□□□ -1.95
SLX4YLR135W ALR1Q08269 859 aa2.84□□□□□ -1.95
SLX4YLR135W CDC19P00549 500 aaKnown RBP2.84□□□□□ -1.96
SLX4YLR135W NAM8Q00539 523 aaKnown RBP2.84□□□□□ -1.96
SLX4YLR135W YMR265CQ03508 461 aaKnown RBP2.83□□□□□ -1.96
SLX4YLR135W MCA1Q08601 432 aa2.83□□□□□ -1.96
SLX4YLR135W INP52P50942 1183 aa2.83□□□□□ -1.96
SLX4YLR135W YBL086CP38177 466 aa2.81□□□□□ -1.96
SLX4YLR135W CLB5P30283 435 aa2.81□□□□□ -1.96
SLX4YLR135W SLN1P39928 1220 aaPredicted RBP2.81□□□□□ -1.96
SLX4YLR135W SYT1Q06836 1226 aa2.8□□□□□ -1.96
SLX4YLR135W REF2P42073 533 aaPredicted RBP2.79□□□□□ -1.96
SLX4YLR135W TBF1Q02457 562 aa2.78□□□□□ -1.96
SLX4YLR135W SAS10Q12136 610 aaPredicted RBP2.78□□□□□ -1.96
SLX4YLR135W MAK21Q12176 1025 aaKnown RBP2.78□□□□□ -1.96
SLX4YLR135W DIT1P21623 536 aa2.77□□□□□ -1.97
SLX4YLR135W RPA14P50106 137 aa2.77□□□□□ -1.97
SLX4YLR135W KRE33P53914 1056 aaKnown RBP2.77□□□□□ -1.97
SLX4YLR135W YDR461C-AQ2V2P7 80 aa2.77□□□□□ -1.97
SLX4YLR135W VTC4P47075 721 aa2.75□□□□□ -1.97
SLX4YLR135W LEO1P38439 464 aa2.74□□□□□ -1.97
SLX4YLR135W YPR097WQ06839 1073 aa2.74□□□□□ -1.97
SLX4YLR135W LEU3P08638 886 aa2.74□□□□□ -1.97
SLX4YLR135W ELM1P32801 640 aa2.73□□□□□ -1.97
SLX4YLR135W YKL222CP35995 705 aa2.72□□□□□ -1.97
SLX4YLR135W UBP5P39944 805 aa2.72□□□□□ -1.97
SLX4YLR135W TAF7Q05021 590 aa2.72□□□□□ -1.97
SLX4YLR135W COX6P00427 148 aa2.7□□□□□ -1.98
SLX4YLR135W BDS1Q08347 646 aa2.7□□□□□ -1.98
SLX4YLR135W GPM1P00950 247 aaKnown RBP2.7□□□□□ -1.98
SLX4YLR135W YDL206WQ12424 762 aa2.7□□□□□ -1.98
SLX4YLR135W LIP5P32875 414 aa2.69□□□□□ -1.98
SLX4YLR135W PRY1P47032 299 aa2.69□□□□□ -1.98
SLX4YLR135W UBP15P50101 1230 aa2.69□□□□□ -1.98
SLX4YLR135W YPR148CQ06523 435 aa2.69□□□□□ -1.98
SLX4YLR135W MKS1P34072 584 aa2.69□□□□□ -1.98
SLX4YLR135W PUS6P53294 404 aa2.68□□□□□ -1.98
SLX4YLR135W NAF1P53919 492 aaKnown RBP2.68□□□□□ -1.98
SLX4YLR135W APP1P53933 587 aa2.68□□□□□ -1.98
SLX4YLR135W DAL1P32375 460 aa2.68□□□□□ -1.98
SLX4YLR135W NAB2P32505 525 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98 RIP-Chip
SLX4YLR135W DFG5Q05031 458 aa2.68□□□□□ -1.98
SLX4YLR135W MED7Q08278 222 aa2.67□□□□□ -1.98
SLX4YLR135W EMW1P42842 904 aaKnown RBP2.66□□□□□ -1.98
SLX4YLR135W SLY41P22215 453 aa2.66□□□□□ -1.98
SLX4YLR135W FPS1P23900 669 aa2.66□□□□□ -1.98
SLX4YLR135W CKB1P43639 278 aa2.66□□□□□ -1.98
SLX4YLR135W SIT4P20604 311 aa2.65□□□□□ -1.98
SLX4YLR135W PSE1P32337 1089 aaKnown RBP2.65□□□□□ -1.98
SLX4YLR135W RPP2BP02400 110 aaKnown RBP2.64□□□□□ -1.99
SLX4YLR135W VAC17P25591 423 aa2.64□□□□□ -1.99
SLX4YLR135W YCR015CP25616 317 aa2.62□□□□□ -1.99
SLX4YLR135W KNS1P32350 737 aaPredicted RBP2.62□□□□□ -1.99
SLX4YLR135W RPN1P38764 993 aaKnown RBP2.62□□□□□ -1.99
SLX4YLR135W DLD3P39976 496 aaKnown RBP2.62□□□□□ -1.99
SLX4YLR135W TPS3P38426 1054 aaKnown RBP2.62□□□□□ -1.99
SLX4YLR135W VPS70P47161 811 aa2.62□□□□□ -1.99
SLX4YLR135W COQ2P32378 372 aa2.61□□□□□ -1.99
SLX4YLR135W DSF2P38213 736 aa2.61□□□□□ -1.99
SLX4YLR135W SPB4P25808 606 aaPredicted RBP2.59□□□□□ -1.99
SLX4YLR135W PDC5P16467 563 aaKnown RBP2.58□□□□□ -2
SLX4YLR135W KAE1P36132 386 aa2.58□□□□□ -2
SLX4YLR135W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SLX4YLR135W YMR196WQ04336 1088 aa2.58□□□□□ -2
SLX4YLR135W PBS2P08018 668 aa2.58□□□□□ -2
SLX4YLR135W PUB1P32588 453 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SLX4YLR135W TOS1P38288 455 aa2.57□□□□□ -2
SLX4YLR135W AHP1P38013 176 aaKnown RBP2.57□□□□□ -2
SLX4YLR135W YNR021WP53723 404 aaKnown RBP2.57□□□□□ -2
SLX4YLR135W TEA1P47988 759 aa2.56□□□□□ -2
SLX4YLR135W FBP26P32604 452 aa2.56□□□□□ -2
SLX4YLR135W AIM7Q12156 149 aa2.56□□□□□ -2
SLX4YLR135W MAM3Q12296 706 aa2.56□□□□□ -2
SLX4YLR135W YPT53P36019 220 aa2.54□□□□□ -2
SLX4YLR135W YGR130CP53278 816 aa2.54□□□□□ -2
SLX4YLR135W STE6P12866 1290 aa2.54□□□□□ -2
SLX4YLR135W TRM1P15565 570 aaKnown RBP2.54□□□□□ -2
SLX4YLR135W YKR073CP36153 106 aa2.54□□□□□ -2
SLX4YLR135W NUP42P49686 430 aaKnown RBP2.54□□□□□ -2
SLX4YLR135W TAD3Q9URQ3 322 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms