RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSF1	YLR087C	CDC25	P04821	1589 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	PHO84	P25297	587 aa	Known RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	YME2	P32843	850 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	SDA1	P53313	767 aa	Known RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	CLF1	Q12309	687 aa	Predicted RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	DUR3	P33413	735 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	RPC37	P36121	282 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	NOC2	P39744	710 aa	Known RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	AIM20	P40451	204 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	RPL34A	P87262	121 aa	Predicted RBP	2.7	□□□□□ -1.98
CSF1	YLR087C	SVF1	Q05515	481 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	BLI1	P35727	113 aa		2.7	□□□□□ -1.98
CSF1	YLR087C	KAR3	P17119	729 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	ALA1	P40825	983 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	CTF4	Q01454	927 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	TSR1	Q07381	788 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	CAB2	P40506	365 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	LSP1	Q12230	341 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	RPL22A	P05749	121 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	TAF13	P11747	167 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	KEX2	P13134	814 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	MMS1	Q06211	1407 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	DRS2	P39524	1355 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	TIP41	Q12199	356 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	DJP1	P40564	432 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	YPP1	P46951	817 aa		2.69	□□□□□ -1.98
CSF1	YLR087C	SSK22	P25390	1331 aa	Predicted RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	SET1	P38827	1080 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	APL5	Q08951	932 aa	Known RBP	2.69	□□□□□ -1.98
CSF1	YLR087C	RPT2	P40327	437 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	SYH1	Q02875	849 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	ESP1	Q03018	1630 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	VPS30	Q02948	557 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	YKU80	Q04437	629 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	TFC6	Q06339	672 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	APC11	Q12157	165 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	STU1	P38198	1513 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	POL31	P46957	487 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	UTP8	P53276	713 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	UTP13	Q05946	817 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	YLR257W	Q06146	321 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	POL1	P13382	1468 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	HIR2	P32480	875 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	RSC8	P43609	557 aa	Known RBP	2.68	□□□□□ -1.98
CSF1	YLR087C	RSC1	P53236	928 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	ISW1	P38144	1129 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	VMA22	P38784	181 aa		2.68	□□□□□ -1.98
CSF1	YLR087C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
CSF1	YLR087C	YLR352W	Q06479	807 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	BUG1	Q12191	341 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	TUS1	Q06412	1307 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	CWC21	Q03375	135 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	YOR093C	Q12275	1648 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	UIP5	P36137	443 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	RRP17	Q04031	235 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	ABP140	Q08641	628 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	PDR15	Q04182	1529 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	SIP3	P38717	1229 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	CGR1	P53188	120 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	LCD1	Q04377	747 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	RPN7	Q06103	429 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	SAP1	P39955	897 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	MSH4	P40965	878 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	OCA1	P50946	238 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	YPR097W	Q06839	1073 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	CAJ1	P39101	391 aa		2.67	□□□□□ -1.98
CSF1	YLR087C	YSH1	Q06224	779 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	RRP15	Q06511	250 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	MSS116	P15424	664 aa	Known RBP	2.67	□□□□□ -1.98
CSF1	YLR087C	HMI1	Q12039	706 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	LSG1	P53145	640 aa	Known RBP	2.66	□□□□□ -1.98
CSF1	YLR087C	MHP1	P43638	1398 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	SPT8	P38915	602 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	YNL193W	P53870	558 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	GTR1	Q00582	310 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	ALB1	P47019	175 aa	Predicted RBP	2.66	□□□□□ -1.98
CSF1	YLR087C	SMC3	P47037	1230 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	FAR11	P53917	953 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	ASI1	P54074	624 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	LEA1	Q08963	238 aa	Predicted RBP	2.66	□□□□□ -1.98
CSF1	YLR087C	NUG1	P40010	520 aa	Known RBP	2.66	□□□□□ -1.98
CSF1	YLR087C	SNQ2	P32568	1501 aa	Known RBP	2.66	□□□□□ -1.98
CSF1	YLR087C	YKL063C	P35725	167 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	RTS3	P53289	263 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	RIA1	P53893	1110 aa		2.66	□□□□□ -1.98
CSF1	YLR087C	STF1	P01098	86 aa		2.65	□□□□□ -1.98
CSF1	YLR087C	RMA1	P36001	430 aa	Known RBP	2.65	□□□□□ -1.98
CSF1	YLR087C	PXR1	P53335	271 aa	Predicted RBP	2.65	□□□□□ -1.98
CSF1	YLR087C	YNR061C	P53747	219 aa		2.65	□□□□□ -1.98
CSF1	YLR087C	RRB1	Q04225	511 aa	Known RBP	2.65	□□□□□ -1.98
CSF1	YLR087C	TIM50	Q02776	476 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	GCN2	P15442	1659 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	HOM2	P13663	365 aa	Known RBP	2.65	□□□□□ -1.99
CSF1	YLR087C	MET10	P39692	1035 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	APL6	P46682	809 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	VPS4	P52917	437 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	BRN1	P38170	754 aa		2.65	□□□□□ -1.99
CSF1	YLR087C	ARB1	P40024	610 aa	Known RBP	2.65	□□□□□ -1.99
CSF1	YLR087C	PDS1	P40316	373 aa	Predicted RBP	2.65	□□□□□ -1.99
CSF1	YLR087C	ATG20	Q07528	640 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms