RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C CDC25P04821 1589 aa2.7□□□□□ -1.98
CSF1YLR087C PHO84P25297 587 aaKnown RBP2.7□□□□□ -1.98
CSF1YLR087C YME2P32843 850 aa2.7□□□□□ -1.98
CSF1YLR087C SDA1P53313 767 aaKnown RBP2.7□□□□□ -1.98
CSF1YLR087C CLF1Q12309 687 aaPredicted RBP2.7□□□□□ -1.98
CSF1YLR087C DUR3P33413 735 aa2.7□□□□□ -1.98
CSF1YLR087C RPC37P36121 282 aa2.7□□□□□ -1.98
CSF1YLR087C NOC2P39744 710 aaKnown RBP2.7□□□□□ -1.98
CSF1YLR087C AIM20P40451 204 aa2.7□□□□□ -1.98
CSF1YLR087C RPL34AP87262 121 aaPredicted RBP2.7□□□□□ -1.98
CSF1YLR087C SVF1Q05515 481 aa2.7□□□□□ -1.98
CSF1YLR087C BLI1P35727 113 aa2.7□□□□□ -1.98
CSF1YLR087C KAR3P17119 729 aa2.69□□□□□ -1.98
CSF1YLR087C ALA1P40825 983 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C CTF4Q01454 927 aa2.69□□□□□ -1.98
CSF1YLR087C TSR1Q07381 788 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C CAB2P40506 365 aa2.69□□□□□ -1.98
CSF1YLR087C LSP1Q12230 341 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C RPL22AP05749 121 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C TAF13P11747 167 aa2.69□□□□□ -1.98
CSF1YLR087C KEX2P13134 814 aa2.69□□□□□ -1.98
CSF1YLR087C MMS1Q06211 1407 aa2.69□□□□□ -1.98
CSF1YLR087C DRS2P39524 1355 aa2.69□□□□□ -1.98
CSF1YLR087C TIP41Q12199 356 aa2.69□□□□□ -1.98
CSF1YLR087C DJP1P40564 432 aa2.69□□□□□ -1.98
CSF1YLR087C YPP1P46951 817 aa2.69□□□□□ -1.98
CSF1YLR087C SSK22P25390 1331 aaPredicted RBP2.69□□□□□ -1.98
CSF1YLR087C SET1P38827 1080 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C APL5Q08951 932 aaKnown RBP2.69□□□□□ -1.98
CSF1YLR087C RPT2P40327 437 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C SYH1Q02875 849 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C ESP1Q03018 1630 aa2.68□□□□□ -1.98
CSF1YLR087C VPS30Q02948 557 aa2.68□□□□□ -1.98
CSF1YLR087C YKU80Q04437 629 aa2.68□□□□□ -1.98
CSF1YLR087C TFC6Q06339 672 aa2.68□□□□□ -1.98
CSF1YLR087C APC11Q12157 165 aa2.68□□□□□ -1.98
CSF1YLR087C STU1P38198 1513 aa2.68□□□□□ -1.98
CSF1YLR087C POL31P46957 487 aa2.68□□□□□ -1.98
CSF1YLR087C UTP8P53276 713 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C UTP13Q05946 817 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C YLR257WQ06146 321 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C POL1P13382 1468 aa2.68□□□□□ -1.98
CSF1YLR087C HIR2P32480 875 aa2.68□□□□□ -1.98
CSF1YLR087C RSC8P43609 557 aaKnown RBP2.68□□□□□ -1.98
CSF1YLR087C RSC1P53236 928 aa2.68□□□□□ -1.98
CSF1YLR087C ISW1P38144 1129 aa2.68□□□□□ -1.98
CSF1YLR087C VMA22P38784 181 aa2.68□□□□□ -1.98
CSF1YLR087C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
CSF1YLR087C YLR352WQ06479 807 aa2.67□□□□□ -1.98
CSF1YLR087C BUG1Q12191 341 aa2.67□□□□□ -1.98
CSF1YLR087C TUS1Q06412 1307 aa2.67□□□□□ -1.98
CSF1YLR087C CWC21Q03375 135 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C YOR093CQ12275 1648 aa2.67□□□□□ -1.98
CSF1YLR087C UIP5P36137 443 aa2.67□□□□□ -1.98
CSF1YLR087C RRP17Q04031 235 aaPredicted RBP2.67□□□□□ -1.98
CSF1YLR087C ABP140Q08641 628 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C PDR15Q04182 1529 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C SIP3P38717 1229 aa2.67□□□□□ -1.98
CSF1YLR087C CGR1P53188 120 aa2.67□□□□□ -1.98
CSF1YLR087C LCD1Q04377 747 aa2.67□□□□□ -1.98
CSF1YLR087C RPN7Q06103 429 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C SAP1P39955 897 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C MSH4P40965 878 aaPredicted RBP2.67□□□□□ -1.98
CSF1YLR087C OCA1P50946 238 aaPredicted RBP2.67□□□□□ -1.98
CSF1YLR087C YPR097WQ06839 1073 aa2.67□□□□□ -1.98
CSF1YLR087C CAJ1P39101 391 aa2.67□□□□□ -1.98
CSF1YLR087C YSH1Q06224 779 aaPredicted RBP2.67□□□□□ -1.98
CSF1YLR087C RRP15Q06511 250 aaPredicted RBP2.67□□□□□ -1.98
CSF1YLR087C MSS116P15424 664 aaKnown RBP2.67□□□□□ -1.98
CSF1YLR087C HMI1Q12039 706 aa2.66□□□□□ -1.98
CSF1YLR087C LSG1P53145 640 aaKnown RBP2.66□□□□□ -1.98
CSF1YLR087C MHP1P43638 1398 aa2.66□□□□□ -1.98
CSF1YLR087C SPT8P38915 602 aa2.66□□□□□ -1.98
CSF1YLR087C YNL193WP53870 558 aa2.66□□□□□ -1.98
CSF1YLR087C GTR1Q00582 310 aa2.66□□□□□ -1.98
CSF1YLR087C ALB1P47019 175 aaPredicted RBP2.66□□□□□ -1.98
CSF1YLR087C SMC3P47037 1230 aa2.66□□□□□ -1.98
CSF1YLR087C FAR11P53917 953 aa2.66□□□□□ -1.98
CSF1YLR087C ASI1P54074 624 aa2.66□□□□□ -1.98
CSF1YLR087C LEA1Q08963 238 aaPredicted RBP2.66□□□□□ -1.98
CSF1YLR087C NUG1P40010 520 aaKnown RBP2.66□□□□□ -1.98
CSF1YLR087C SNQ2P32568 1501 aaKnown RBP2.66□□□□□ -1.98
CSF1YLR087C YKL063CP35725 167 aa2.66□□□□□ -1.98
CSF1YLR087C RTS3P53289 263 aa2.66□□□□□ -1.98
CSF1YLR087C RIA1P53893 1110 aa2.66□□□□□ -1.98
CSF1YLR087C STF1P01098 86 aa2.65□□□□□ -1.98
CSF1YLR087C RMA1P36001 430 aaKnown RBP2.65□□□□□ -1.98
CSF1YLR087C PXR1P53335 271 aaPredicted RBP2.65□□□□□ -1.98
CSF1YLR087C YNR061CP53747 219 aa2.65□□□□□ -1.98
CSF1YLR087C RRB1Q04225 511 aaKnown RBP2.65□□□□□ -1.98
CSF1YLR087C TIM50Q02776 476 aa2.65□□□□□ -1.99
CSF1YLR087C GCN2P15442 1659 aa2.65□□□□□ -1.99
CSF1YLR087C HOM2P13663 365 aaKnown RBP2.65□□□□□ -1.99
CSF1YLR087C MET10P39692 1035 aa2.65□□□□□ -1.99
CSF1YLR087C APL6P46682 809 aa2.65□□□□□ -1.99
CSF1YLR087C VPS4P52917 437 aa2.65□□□□□ -1.99
CSF1YLR087C BRN1P38170 754 aa2.65□□□□□ -1.99
CSF1YLR087C ARB1P40024 610 aaKnown RBP2.65□□□□□ -1.99
CSF1YLR087C PDS1P40316 373 aaPredicted RBP2.65□□□□□ -1.99
CSF1YLR087C ATG20Q07528 640 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms