RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C HGH1P48362 394 aaKnown RBP5.64□□□□□ -1.51
AFB1YLR040C YPR084WQ06821 456 aa5.64□□□□□ -1.51
AFB1YLR040C SUP45P12385 437 aaKnown RBP5.63□□□□□ -1.51
AFB1YLR040C TRK1P12685 1235 aa5.63□□□□□ -1.51
AFB1YLR040C NAF1P53919 492 aaKnown RBP5.63□□□□□ -1.51
AFB1YLR040C YNL108CP53929 270 aa5.63□□□□□ -1.51
AFB1YLR040C TEC1P18412 486 aa5.62□□□□□ -1.51
AFB1YLR040C ENO2P00925 437 aaKnown RBP5.6□□□□□ -1.51
AFB1YLR040C SPT5P27692 1063 aaKnown RBP5.6□□□□□ -1.51
AFB1YLR040C ISF1P32488 338 aa5.6□□□□□ -1.51
AFB1YLR040C ASH1P34233 588 aa5.6□□□□□ -1.51
AFB1YLR040C APP1P53933 587 aa5.6□□□□□ -1.51
AFB1YLR040C GUT2P32191 649 aa5.59□□□□□ -1.51
AFB1YLR040C MRT4P33201 236 aaKnown RBP5.59□□□□□ -1.51
AFB1YLR040C TIF1P10081 395 aaKnown RBP5.58□□□□□ -1.52
AFB1YLR040C EMP47P43555 445 aa5.58□□□□□ -1.52
AFB1YLR040C FRA1Q07825 749 aa5.58□□□□□ -1.52
AFB1YLR040C MCM16Q12262 181 aa5.58□□□□□ -1.52
AFB1YLR040C AFT1P22149 690 aa5.57□□□□□ -1.52
AFB1YLR040C EMW1P42842 904 aaKnown RBP5.57□□□□□ -1.52
AFB1YLR040C STE20Q03497 939 aaKnown RBP5.57□□□□□ -1.52
AFB1YLR040C HST3P53687 447 aa5.55□□□□□ -1.52
AFB1YLR040C RTG2P32608 588 aaKnown RBP5.54□□□□□ -1.52
AFB1YLR040C ENO1P00924 437 aaKnown RBP5.53□□□□□ -1.52
AFB1YLR040C YBL086CP38177 466 aa5.53□□□□□ -1.52
AFB1YLR040C RPL34BP40525 121 aaKnown RBP5.53□□□□□ -1.52
AFB1YLR040C APL6P46682 809 aa5.53□□□□□ -1.52
AFB1YLR040C RIM21P48565 533 aa5.53□□□□□ -1.52
AFB1YLR040C MRX10Q05648 414 aa5.53□□□□□ -1.52
AFB1YLR040C RDS2P19541 446 aaKnown RBP5.52□□□□□ -1.53
AFB1YLR040C YJR115WP47152 169 aa5.52□□□□□ -1.53
AFB1YLR040C UGA3P26370 528 aa5.51□□□□□ -1.53
AFB1YLR040C BRE2P43132 505 aa5.51□□□□□ -1.53
AFB1YLR040C YPP1P46951 817 aa5.51□□□□□ -1.53
AFB1YLR040C ATG20Q07528 640 aa5.51□□□□□ -1.53
AFB1YLR040C YPR204WQ08995 1032 aa5.51□□□□□ -1.53
AFB1YLR040C MKS1P34072 584 aa5.5□□□□□ -1.53
AFB1YLR040C MRX12P47084 519 aa5.5□□□□□ -1.53
AFB1YLR040C MSB3P48566 633 aaPredicted RBP5.5□□□□□ -1.53
AFB1YLR040C DFG5Q05031 458 aa5.5□□□□□ -1.53
AFB1YLR040C HAL5P38970 855 aaKnown RBP5.49□□□□□ -1.53
AFB1YLR040C GCR2Q01722 534 aa5.49□□□□□ -1.53
AFB1YLR040C FBP26P32604 452 aa5.48□□□□□ -1.53
AFB1YLR040C SOH1P38633 127 aa5.48□□□□□ -1.53
AFB1YLR040C RGA1P39083 1007 aa5.48□□□□□ -1.53
AFB1YLR040C ISR1Q06098 443 aaKnown RBP5.48□□□□□ -1.53
AFB1YLR040C ENV9Q08651 330 aa5.48□□□□□ -1.53
AFB1YLR040C STE6P12866 1290 aa5.47□□□□□ -1.53
AFB1YLR040C PTK2P47116 818 aaKnown RBP5.47□□□□□ -1.53
AFB1YLR040C ISU1Q03020 165 aa5.47□□□□□ -1.53
AFB1YLR040C PEP12P32854 288 aa5.46□□□□□ -1.54
AFB1YLR040C RTT106P40161 455 aa5.45□□□□□ -1.54
AFB1YLR040C BDS1Q08347 646 aa5.45□□□□□ -1.54
AFB1YLR040C MET22P32179 357 aa5.44□□□□□ -1.54
AFB1YLR040C TTI1P36097 1038 aa5.44□□□□□ -1.54
AFB1YLR040C AAD14P42884 376 aa5.44□□□□□ -1.54
AFB1YLR040C UTP13Q05946 817 aaKnown RBP5.44□□□□□ -1.54
AFB1YLR040C ARG82P07250 355 aa5.43□□□□□ -1.54
AFB1YLR040C ATG3P40344 310 aa5.43□□□□□ -1.54
AFB1YLR040C HDA3Q06623 655 aa5.43□□□□□ -1.54
AFB1YLR040C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
AFB1YLR040C SRF1Q12516 437 aa5.43□□□□□ -1.54
AFB1YLR040C KTR7P40504 517 aa5.42□□□□□ -1.54
AFB1YLR040C NUP85P46673 744 aa5.42□□□□□ -1.54
AFB1YLR040C RLF2Q12495 606 aa5.42□□□□□ -1.54
AFB1YLR040C SPT2P06843 333 aaPredicted RBP5.41□□□□□ -1.54
AFB1YLR040C DLD1P32891 587 aa5.41□□□□□ -1.54
AFB1YLR040C WTM2Q12206 467 aa5.41□□□□□ -1.54
AFB1YLR040C DAT1P13483 248 aaKnown RBP5.4□□□□□ -1.54
AFB1YLR040C MIP1P15801 1254 aa5.4□□□□□ -1.54
AFB1YLR040C CPS1P27614 576 aa5.4□□□□□ -1.54
AFB1YLR040C UTR2P32623 467 aa5.4□□□□□ -1.54
AFB1YLR040C YDR444WQ04093 687 aa5.39□□□□□ -1.55
AFB1YLR040C OPT2Q06593 877 aa5.39□□□□□ -1.55
AFB1YLR040C PDI1P17967 522 aaKnown RBP5.38□□□□□ -1.55
AFB1YLR040C SLX8P40072 274 aa5.38□□□□□ -1.55
AFB1YLR040C YJR098CP47139 656 aa5.38□□□□□ -1.55
AFB1YLR040C GAR1P28007 205 aaKnown RBP5.37□□□□□ -1.55
AFB1YLR040C TGL4P36165 910 aa5.37□□□□□ -1.55
AFB1YLR040C LCB5Q06147 687 aaKnown RBP5.37□□□□□ -1.55
AFB1YLR040C SIS2P36024 562 aa5.36□□□□□ -1.55
AFB1YLR040C AIM9P40053 627 aaKnown RBP5.36□□□□□ -1.55
AFB1YLR040C UTP7P40055 554 aaKnown RBP5.36□□□□□ -1.55
AFB1YLR040C ACS2P52910 683 aaKnown RBP5.36□□□□□ -1.55
AFB1YLR040C LSC2P53312 427 aa5.36□□□□□ -1.55
AFB1YLR040C TCB1Q12466 1186 aa5.36□□□□□ -1.55
AFB1YLR040C SWI5P08153 709 aa5.35□□□□□ -1.55
AFB1YLR040C PUP1P25043 261 aa5.35□□□□□ -1.55
AFB1YLR040C NTH2P35172 780 aa5.35□□□□□ -1.55
AFB1YLR040C TBS1P38114 1094 aa5.35□□□□□ -1.55
AFB1YLR040C TSC13Q99190 310 aa5.35□□□□□ -1.55
AFB1YLR040C RPP2BP02400 110 aaKnown RBP5.34□□□□□ -1.55
AFB1YLR040C GAL2P13181 574 aa5.34□□□□□ -1.55
AFB1YLR040C DLD3P39976 496 aaKnown RBP5.34□□□□□ -1.55
AFB1YLR040C YLR346CQ06139 101 aa5.34□□□□□ -1.55
AFB1YLR040C RPS6AP0CX37 236 aaKnown RBP5.33□□□□□ -1.56
AFB1YLR040C RPS6BP0CX38 236 aaPredicted RBP5.33□□□□□ -1.56
AFB1YLR040C PHO87P25360 923 aa5.33□□□□□ -1.56
AFB1YLR040C GLY1P37303 387 aaKnown RBP5.33□□□□□ -1.56
AFB1YLR040C SSN3P39073 555 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms