RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A YPR097WQ06839 1073 aa3.06□□□□□ -1.92
YLR035C-AYLR035C-A ENO1P00924 437 aaKnown RBP3.06□□□□□ -1.92
YLR035C-AYLR035C-A RPA14P50106 137 aa3.06□□□□□ -1.92
YLR035C-AYLR035C-A MET32Q12041 191 aa3.06□□□□□ -1.92
YLR035C-AYLR035C-A TEC1P18412 486 aa3.06□□□□□ -1.92
YLR035C-AYLR035C-A DFG5Q05031 458 aa3.06□□□□□ -1.92
YLR035C-AYLR035C-A RRD1P40454 393 aaKnown RBP3.05□□□□□ -1.92
YLR035C-AYLR035C-A MOD5P07884 428 aa3.04□□□□□ -1.92
YLR035C-AYLR035C-A UGA3P26370 528 aa3.04□□□□□ -1.92
YLR035C-AYLR035C-A SOH1P38633 127 aa3.04□□□□□ -1.92
YLR035C-AYLR035C-A SYH1Q02875 849 aaKnown RBP3.04□□□□□ -1.92
YLR035C-AYLR035C-A SRC1Q03707 834 aa3.04□□□□□ -1.92
YLR035C-AYLR035C-A ISR1Q06098 443 aaKnown RBP3.04□□□□□ -1.92
YLR035C-AYLR035C-A SRF1Q12516 437 aa3.04□□□□□ -1.92
YLR035C-AYLR035C-A MIP1P15801 1254 aa3.03□□□□□ -1.92
YLR035C-AYLR035C-A HST3P53687 447 aa3.03□□□□□ -1.92
YLR035C-AYLR035C-A MCM16Q12262 181 aa3.03□□□□□ -1.92
YLR035C-AYLR035C-A DAT1P13483 248 aaKnown RBP3.03□□□□□ -1.92
YLR035C-AYLR035C-A TRK1P12685 1235 aa3.03□□□□□ -1.92
YLR035C-AYLR035C-A MKS1P34072 584 aa3.03□□□□□ -1.92
YLR035C-AYLR035C-A UTP7P40055 554 aaKnown RBP3.03□□□□□ -1.92
YLR035C-AYLR035C-A MAK16P10962 306 aaPredicted RBP3.02□□□□□ -1.93
YLR035C-AYLR035C-A YML083CQ04526 418 aa3.02□□□□□ -1.93
YLR035C-AYLR035C-A HPC2Q01448 625 aa3.02□□□□□ -1.93
YLR035C-AYLR035C-A PDI1P17967 522 aaKnown RBP3.02□□□□□ -1.93
YLR035C-AYLR035C-A GBP2P25555 427 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
YLR035C-AYLR035C-A ECM23Q02710 187 aa3.01□□□□□ -1.93
YLR035C-AYLR035C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
YLR035C-AYLR035C-A YJR115WP47152 169 aa3□□□□□ -1.93
YLR035C-AYLR035C-A STE20Q03497 939 aaKnown RBP3□□□□□ -1.93
YLR035C-AYLR035C-A ATG20Q07528 640 aa3□□□□□ -1.93
YLR035C-AYLR035C-A GUT2P32191 649 aa3□□□□□ -1.93
YLR035C-AYLR035C-A HAL5P38970 855 aaKnown RBP3□□□□□ -1.93
YLR035C-AYLR035C-A VAC17P25591 423 aa2.99□□□□□ -1.93
YLR035C-AYLR035C-A HGH1P48362 394 aaKnown RBP2.99□□□□□ -1.93
YLR035C-AYLR035C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
YLR035C-AYLR035C-A HED1Q03937 162 aa2.99□□□□□ -1.93
YLR035C-AYLR035C-A UBX7P38349 436 aa2.98□□□□□ -1.93
YLR035C-AYLR035C-A CDC4P07834 779 aa2.97□□□□□ -1.93
YLR035C-AYLR035C-A YPR084WQ06821 456 aa2.96□□□□□ -1.93
YLR035C-AYLR035C-A BDS1Q08347 646 aa2.96□□□□□ -1.93
YLR035C-AYLR035C-A SUP45P12385 437 aaKnown RBP2.96□□□□□ -1.94
YLR035C-AYLR035C-A RDS2P19541 446 aaKnown RBP2.96□□□□□ -1.94
YLR035C-AYLR035C-A BRE2P43132 505 aa2.96□□□□□ -1.94
YLR035C-AYLR035C-A ALA1P40825 983 aaKnown RBP2.96□□□□□ -1.94
YLR035C-AYLR035C-A PTK2P47116 818 aaKnown RBP2.96□□□□□ -1.94
YLR035C-AYLR035C-A HDA3Q06623 655 aa2.96□□□□□ -1.94
YLR035C-AYLR035C-A RIM21P48565 533 aa2.95□□□□□ -1.94
YLR035C-AYLR035C-A FOX2Q02207 900 aaKnown RBP2.95□□□□□ -1.94
YLR035C-AYLR035C-A UTR2P32623 467 aa2.94□□□□□ -1.94
YLR035C-AYLR035C-A TTI1P36097 1038 aa2.94□□□□□ -1.94
YLR035C-AYLR035C-A FRA1Q07825 749 aa2.94□□□□□ -1.94
YLR035C-AYLR035C-A CSE4P36012 229 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A EMW1P42842 904 aaKnown RBP2.92□□□□□ -1.94
YLR035C-AYLR035C-A GCR2Q01722 534 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A TGL4P36165 910 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A TBS1P38114 1094 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A ACS2P52910 683 aaKnown RBP2.92□□□□□ -1.94
YLR035C-AYLR035C-A CAF120P53836 1060 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A MRX10Q05648 414 aa2.92□□□□□ -1.94
YLR035C-AYLR035C-A AIM9P40053 627 aaKnown RBP2.91□□□□□ -1.94
YLR035C-AYLR035C-A YDR444WQ04093 687 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A FBP26P32604 452 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A NTH2P35172 780 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A DLD3P39976 496 aaKnown RBP2.91□□□□□ -1.94
YLR035C-AYLR035C-A TCB1Q12466 1186 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A AFT1P22149 690 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A PUP1P25043 261 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A MET22P32179 357 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A OPT2Q06593 877 aa2.91□□□□□ -1.94
YLR035C-AYLR035C-A NOB1Q08444 459 aaKnown RBP2.91□□□□□ -1.94
YLR035C-AYLR035C-A YBL086CP38177 466 aa2.9□□□□□ -1.94
YLR035C-AYLR035C-A AAD14P42884 376 aa2.9□□□□□ -1.94
YLR035C-AYLR035C-A ISU1Q03020 165 aa2.9□□□□□ -1.94
YLR035C-AYLR035C-A WTM2Q12206 467 aa2.9□□□□□ -1.95
YLR035C-AYLR035C-A ARG82P07250 355 aa2.89□□□□□ -1.95
YLR035C-AYLR035C-A SWI5P08153 709 aa2.89□□□□□ -1.95
YLR035C-AYLR035C-A NAF1P53919 492 aaKnown RBP2.88□□□□□ -1.95
YLR035C-AYLR035C-A RPS6AP0CX37 236 aaKnown RBP2.88□□□□□ -1.95
YLR035C-AYLR035C-A RPS6BP0CX38 236 aaPredicted RBP2.88□□□□□ -1.95
YLR035C-AYLR035C-A RLF2Q12495 606 aa2.88□□□□□ -1.95
YLR035C-AYLR035C-A SSA4P22202 642 aaKnown RBP2.87□□□□□ -1.95
YLR035C-AYLR035C-A YPP1P46951 817 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A SUB2Q07478 446 aaKnown RBP2.87□□□□□ -1.95
YLR035C-AYLR035C-A GAL2P13181 574 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A RPL34AP87262 121 aaPredicted RBP2.87□□□□□ -1.95
YLR035C-AYLR035C-A PUN1Q06991 263 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A SPT5P27692 1063 aaKnown RBP2.87□□□□□ -1.95
YLR035C-AYLR035C-A TPD3P31383 635 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A YJR098CP47139 656 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A Q0182Q9ZZW1 134 aa2.87□□□□□ -1.95
YLR035C-AYLR035C-A ROM1P53046 1155 aa2.86□□□□□ -1.95
YLR035C-AYLR035C-A YNL165WP53891 406 aa2.86□□□□□ -1.95
YLR035C-AYLR035C-A MRT4P33201 236 aaKnown RBP2.85□□□□□ -1.95
YLR035C-AYLR035C-A LSC2P53312 427 aa2.85□□□□□ -1.95
YLR035C-AYLR035C-A RGA1P39083 1007 aa2.85□□□□□ -1.95
YLR035C-AYLR035C-A CYT1P07143 309 aa2.85□□□□□ -1.95
YLR035C-AYLR035C-A PEP12P32854 288 aa2.85□□□□□ -1.95
YLR035C-AYLR035C-A TPS3P38426 1054 aaKnown RBP2.85□□□□□ -1.95
YLR035C-AYLR035C-A SLX8P40072 274 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms