RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C ICP55P40051 511 aa6.31□□□□□ -1.4
SDO1YLR022C PUS6P53294 404 aa6.31□□□□□ -1.4
SDO1YLR022C YNR021WP53723 404 aaKnown RBP6.31□□□□□ -1.4
SDO1YLR022C ALR1Q08269 859 aa6.31□□□□□ -1.4
SDO1YLR022C LEU3P08638 886 aa6.3□□□□□ -1.4
SDO1YLR022C GLY1P37303 387 aaKnown RBP6.29□□□□□ -1.4
SDO1YLR022C YIR007WP40566 764 aa6.29□□□□□ -1.4
SDO1YLR022C RPA14P50106 137 aa6.29□□□□□ -1.4
SDO1YLR022C ATF2P53296 535 aa6.29□□□□□ -1.4
SDO1YLR022C MMP1Q12372 583 aa6.29□□□□□ -1.4
SDO1YLR022C ESS1P22696 170 aa6.28□□□□□ -1.4
SDO1YLR022C UGA3P26370 528 aa6.28□□□□□ -1.4
SDO1YLR022C LSB3P43603 459 aaKnown RBP6.28□□□□□ -1.4
SDO1YLR022C HST2P53686 357 aa6.28□□□□□ -1.4
SDO1YLR022C GLC3P32775 704 aa6.27□□□□□ -1.41
SDO1YLR022C IXR1P33417 597 aa6.27□□□□□ -1.41
SDO1YLR022C PTK2P47116 818 aaKnown RBP6.27□□□□□ -1.41
SDO1YLR022C YPR097WQ06839 1073 aa6.27□□□□□ -1.41
SDO1YLR022C YPR204WQ08995 1032 aa6.27□□□□□ -1.41
SDO1YLR022C PUS1Q12211 544 aaKnown RBP6.27□□□□□ -1.41
SDO1YLR022C YCF1P39109 1515 aaKnown RBP6.26□□□□□ -1.41
SDO1YLR022C TYW1Q08960 810 aaKnown RBP6.26□□□□□ -1.41
SDO1YLR022C YJU3P28321 313 aa6.25□□□□□ -1.41
SDO1YLR022C GLN1P32288 370 aaKnown RBP6.25□□□□□ -1.41
SDO1YLR022C TAF2P23255 1407 aa6.25□□□□□ -1.41
SDO1YLR022C AIM7Q12156 149 aa6.24□□□□□ -1.41
SDO1YLR022C SRF1Q12516 437 aa6.24□□□□□ -1.41
SDO1YLR022C SCW11P53189 542 aa6.23□□□□□ -1.41
SDO1YLR022C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
SDO1YLR022C ITT1Q04638 464 aa6.22□□□□□ -1.41
SDO1YLR022C TY1A-BLQ12266 440 aa6.22□□□□□ -1.41
SDO1YLR022C NUP85P46673 744 aa6.21□□□□□ -1.42
SDO1YLR022C NRD1P53617 575 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
SDO1YLR022C ATG2P53855 1592 aa6.21□□□□□ -1.42
SDO1YLR022C MRT4P33201 236 aaKnown RBP6.19□□□□□ -1.42
SDO1YLR022C XRN1P22147 1528 aaKnown RBP6.19□□□□□ -1.42
SDO1YLR022C MIP1P15801 1254 aa6.18□□□□□ -1.42
SDO1YLR022C PKH3Q03306 898 aaPredicted RBP6.18□□□□□ -1.42
SDO1YLR022C PHM7Q12252 991 aa6.18□□□□□ -1.42
SDO1YLR022C LTE1P07866 1435 aa6.17□□□□□ -1.42
SDO1YLR022C KTR1P27810 393 aaKnown RBP6.17□□□□□ -1.42
SDO1YLR022C MYO2P19524 1574 aaKnown RBP6.17□□□□□ -1.42
SDO1YLR022C VAC17P25591 423 aa6.16□□□□□ -1.42
SDO1YLR022C APP1P53933 587 aa6.16□□□□□ -1.42
SDO1YLR022C DPH6Q12429 685 aa6.15□□□□□ -1.42
SDO1YLR022C ARG8P18544 423 aa6.14□□□□□ -1.43
SDO1YLR022C RPN1P38764 993 aaKnown RBP6.14□□□□□ -1.43
SDO1YLR022C RSC30P38781 883 aa6.14□□□□□ -1.43
SDO1YLR022C RTT106P40161 455 aa6.13□□□□□ -1.43
SDO1YLR022C MET5P47169 1442 aa6.13□□□□□ -1.43
SDO1YLR022C BNI1P41832 1953 aa6.12□□□□□ -1.43
SDO1YLR022C CDC25P04821 1589 aa6.11□□□□□ -1.43
SDO1YLR022C DLD1P32891 587 aa6.11□□□□□ -1.43
SDO1YLR022C YBL086CP38177 466 aa6.11□□□□□ -1.43
SDO1YLR022C SKI3P17883 1432 aaKnown RBP6.1□□□□□ -1.43
SDO1YLR022C KIN1P13185 1064 aa6.1□□□□□ -1.43
SDO1YLR022C AAD14P42884 376 aa6.1□□□□□ -1.43
SDO1YLR022C CSN12P47130 423 aa6.09□□□□□ -1.43
SDO1YLR022C RPA190P10964 1664 aaKnown RBP6.09□□□□□ -1.43
SDO1YLR022C ARG82P07250 355 aa6.08□□□□□ -1.44
SDO1YLR022C SSK2P53599 1579 aa6.08□□□□□ -1.44
SDO1YLR022C FIG4P42837 879 aa6.07□□□□□ -1.44
SDO1YLR022C LSC2P53312 427 aa6.07□□□□□ -1.44
SDO1YLR022C UBP2Q01476 1272 aa6.07□□□□□ -1.44
SDO1YLR022C MMS1Q06211 1407 aa6.07□□□□□ -1.44
SDO1YLR022C MDJ1P35191 511 aa6.06□□□□□ -1.44
SDO1YLR022C EMW1P42842 904 aaKnown RBP6.06□□□□□ -1.44
SDO1YLR022C RAD59Q12223 238 aa6.06□□□□□ -1.44
SDO1YLR022C GEA2P39993 1459 aaKnown RBP6.06□□□□□ -1.44
SDO1YLR022C DNF1P32660 1571 aa6.06□□□□□ -1.44
SDO1YLR022C YJR098CP47139 656 aa6.05□□□□□ -1.44
SDO1YLR022C LYS5P50113 272 aa6.04□□□□□ -1.44
SDO1YLR022C TCB1Q12466 1186 aa6.04□□□□□ -1.44
SDO1YLR022C MKS1P34072 584 aa6.03□□□□□ -1.44
SDO1YLR022C ROG3P43602 733 aa6.03□□□□□ -1.44
SDO1YLR022C TY1A-MR1Q04215 440 aa6.03□□□□□ -1.44
SDO1YLR022C DFG5Q05031 458 aa6.03□□□□□ -1.44
SDO1YLR022C SSA2P10592 639 aaKnown RBP6.02□□□□□ -1.45
SDO1YLR022C CCT8P47079 568 aaKnown RBP6.02□□□□□ -1.45
SDO1YLR022C IRC20Q06554 1556 aa6.01□□□□□ -1.45
SDO1YLR022C ESC1Q03661 1658 aaKnown RBP6.01□□□□□ -1.45
SDO1YLR022C TEC1P18412 486 aa6.01□□□□□ -1.45
SDO1YLR022C UFD4P33202 1483 aa6.01□□□□□ -1.45
SDO1YLR022C JJJ3P47138 172 aa6□□□□□ -1.45
SDO1YLR022C RPO31P04051 1460 aa6□□□□□ -1.45
SDO1YLR022C CCP1P00431 361 aa5.99□□□□□ -1.45
SDO1YLR022C NSG2P53898 299 aa5.99□□□□□ -1.45
SDO1YLR022C RKR1Q04781 1562 aa5.98□□□□□ -1.45
SDO1YLR022C GUA1P38625 525 aaKnown RBP5.98□□□□□ -1.45
SDO1YLR022C OSH7P38755 437 aa5.98□□□□□ -1.45
SDO1YLR022C YPR084WQ06821 456 aa5.98□□□□□ -1.45
SDO1YLR022C BDS1Q08347 646 aa5.97□□□□□ -1.45
SDO1YLR022C CHD1P32657 1468 aa5.96□□□□□ -1.45
SDO1YLR022C HPC2Q01448 625 aa5.96□□□□□ -1.46
SDO1YLR022C FBP26P32604 452 aa5.95□□□□□ -1.46
SDO1YLR022C YFL066CP43538 392 aa5.94□□□□□ -1.46
SDO1YLR022C DRS2P39524 1355 aa5.93□□□□□ -1.46
SDO1YLR022C MAK16P10962 306 aaPredicted RBP5.93□□□□□ -1.46
SDO1YLR022C LEO1P38439 464 aa5.92□□□□□ -1.46
SDO1YLR022C THI72Q08579 599 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms