RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeastyeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF3YLL013C BUG1Q12191 341 aa7.53□□□□□ -1.2
PUF3YLL013C HSP104P31539 908 aaKnown RBP7.52□□□□□ -1.21
PUF3YLL013C GRX1P25373 110 aaKnown RBP7.52□□□□□ -1.21
PUF3YLL013C SSA1P10591 642 aaKnown RBP7.51□□□□□ -1.21
PUF3YLL013C YBP2P53169 641 aa7.51□□□□□ -1.21
PUF3YLL013C DSD1P53095 428 aa7.51□□□□□ -1.21
PUF3YLL013C GRE2Q12068 342 aaKnown RBP7.51□□□□□ -1.21
PUF3YLL013C RAD4P14736 754 aa7.5□□□□□ -1.21
PUF3YLL013C CTF4Q01454 927 aa7.49□□□□□ -1.21
PUF3YLL013C TRK1P12685 1235 aa7.48□□□□□ -1.21
PUF3YLL013C AKL1P38080 1108 aaKnown RBP7.48□□□□□ -1.21
PUF3YLL013C NUP145P49687 1317 aa7.48□□□□□ -1.21
PUF3YLL013C UTP22P53254 1237 aaPredicted RBP7.48□□□□□ -1.21
PUF3YLL013C NST1P53935 1240 aa7.48□□□□□ -1.21
PUF3YLL013C HPC2Q01448 625 aa7.48□□□□□ -1.21
PUF3YLL013C SAP155P43612 1002 aa7.47□□□□□ -1.21
PUF3YLL013C AOS1Q06624 347 aa7.47□□□□□ -1.21
PUF3YLL013C TOS1P38288 455 aa7.45□□□□□ -1.22
PUF3YLL013C TUM1Q08686 304 aaKnown RBP7.45□□□□□ -1.22
PUF3YLL013C EAF6P47128 113 aa7.44□□□□□ -1.22
PUF3YLL013C RMT2Q03305 412 aa7.44□□□□□ -1.22
PUF3YLL013C MSN5P52918 1224 aa7.43□□□□□ -1.22
PUF3YLL013C KCC4P25389 1037 aa7.43□□□□□ -1.22
PUF3YLL013C PSD2P53037 1138 aaKnown RBP7.43□□□□□ -1.22
PUF3YLL013C RRT14P40470 206 aa7.42□□□□□ -1.22
PUF3YLL013C RIX7Q07844 837 aaKnown RBP7.42□□□□□ -1.22
PUF3YLL013C NTH2P35172 780 aa7.41□□□□□ -1.22
PUF3YLL013C BUD27P43573 796 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
PUF3YLL013C ALE1Q08548 619 aa7.41□□□□□ -1.22
PUF3YLL013C TEA1P47988 759 aa7.4□□□□□ -1.22
PUF3YLL013C NOP53Q12080 455 aaKnown RBP7.4□□□□□ -1.23
PUF3YLL013C NYV1Q12255 253 aa7.4□□□□□ -1.23
PUF3YLL013C MDG1P53885 366 aa7.39□□□□□ -1.23
PUF3YLL013C CTI6Q08923 506 aa7.39□□□□□ -1.23
PUF3YLL013C CTT1P06115 562 aa7.39□□□□□ -1.23
PUF3YLL013C RRP46P53256 223 aaPredicted RBP7.39□□□□□ -1.23
PUF3YLL013C SER1P33330 395 aaKnown RBP7.38□□□□□ -1.23
PUF3YLL013C UTP10P42945 1769 aaKnown RBP7.38□□□□□ -1.23
PUF3YLL013C YER156CP40093 338 aaKnown RBP7.38□□□□□ -1.23
PUF3YLL013C UGA3P26370 528 aa7.37□□□□□ -1.23
PUF3YLL013C YKL222CP35995 705 aa7.37□□□□□ -1.23
PUF3YLL013C RTR1P40084 226 aaPredicted RBP7.37□□□□□ -1.23
PUF3YLL013C CWH41P53008 833 aa7.36□□□□□ -1.23
PUF3YLL013C NSE3Q05541 303 aa7.36□□□□□ -1.23
PUF3YLL013C PHM7Q12252 991 aa7.36□□□□□ -1.23
PUF3YLL013C LPD1P09624 499 aaKnown RBP7.36□□□□□ -1.23
PUF3YLL013C YFR016CP43597 1233 aaKnown RBP7.36□□□□□ -1.23
PUF3YLL013C YGL082WP53155 381 aa7.35□□□□□ -1.23
PUF3YLL013C YNL050CP53952 270 aa7.35□□□□□ -1.23
PUF3YLL013C SSP2Q08646 371 aa7.35□□□□□ -1.23
PUF3YLL013C ERT1P38140 529 aa7.35□□□□□ -1.23
PUF3YLL013C PRD1P25375 712 aa7.33□□□□□ -1.24
PUF3YLL013C SQS1P53866 767 aaKnown RBP7.33□□□□□ -1.24
PUF3YLL013C KIN4Q01919 800 aa7.33□□□□□ -1.24
PUF3YLL013C RAT1Q02792 1006 aaKnown RBP7.33□□□□□ -1.24
PUF3YLL013C ZDS1P50111 915 aaKnown RBP7.33□□□□□ -1.24
PUF3YLL013C PFF1P38244 976 aa7.32□□□□□ -1.24
PUF3YLL013C IRC3Q06683 689 aa7.31□□□□□ -1.24
PUF3YLL013C SMY1P32364 656 aaKnown RBP7.31□□□□□ -1.24
PUF3YLL013C BDF2Q07442 638 aa7.31□□□□□ -1.24
PUF3YLL013C LYS2P07702 1392 aa7.3□□□□□ -1.24
PUF3YLL013C MAM1P40065 302 aa7.3□□□□□ -1.24
PUF3YLL013C IOC4Q04213 475 aa7.3□□□□□ -1.24
PUF3YLL013C YBR287WP38355 427 aa7.3□□□□□ -1.24
PUF3YLL013C VPS64Q03944 604 aa7.3□□□□□ -1.24
PUF3YLL013C DIB1Q06819 143 aaPredicted RBP7.3□□□□□ -1.24
PUF3YLL013C BMS1Q08965 1183 aaKnown RBP7.3□□□□□ -1.24
PUF3YLL013C MPP10P47083 593 aaKnown RBP7.29□□□□□ -1.24
PUF3YLL013C PMD1P32634 1753 aa7.29□□□□□ -1.24
PUF3YLL013C APL2P36000 726 aaPredicted RBP7.29□□□□□ -1.24
PUF3YLL013C COQ4O13525 335 aa7.28□□□□□ -1.24
PUF3YLL013C ARG8P18544 423 aa7.28□□□□□ -1.24
PUF3YLL013C THI22Q06490 572 aa7.28□□□□□ -1.24
PUF3YLL013C TOP1P04786 769 aa7.28□□□□□ -1.24
PUF3YLL013C ZDS2P54786 942 aa7.28□□□□□ -1.24
PUF3YLL013C ERO1Q03103 563 aa7.28□□□□□ -1.24
PUF3YLL013C DCD1P06773 312 aa7.27□□□□□ -1.25
PUF3YLL013C RTT109Q07794 436 aa7.27□□□□□ -1.25
PUF3YLL013C YPR204WQ08995 1032 aa7.27□□□□□ -1.25
PUF3YLL013C CAF20P12962 161 aaKnown RBP7.26□□□□□ -1.25
PUF3YLL013C GYP7P48365 746 aa7.26□□□□□ -1.25
PUF3YLL013C YDL144CQ07589 356 aa7.26□□□□□ -1.25
PUF3YLL013C ICL1P28240 557 aaPredicted RBP7.26□□□□□ -1.25
PUF3YLL013C FPK1P53739 893 aa7.26□□□□□ -1.25
PUF3YLL013C PKH1Q03407 766 aa7.25□□□□□ -1.25
PUF3YLL013C HAT1Q12341 374 aa7.25□□□□□ -1.25
PUF3YLL013C SIT4P20604 311 aa7.24□□□□□ -1.25
PUF3YLL013C TPD3P31383 635 aa7.24□□□□□ -1.25
PUF3YLL013C SLI15P38283 698 aa7.24□□□□□ -1.25
PUF3YLL013C YOL057WQ08225 711 aa7.24□□□□□ -1.25
PUF3YLL013C RPN1P38764 993 aaKnown RBP7.24□□□□□ -1.25
PUF3YLL013C SAS4Q04003 481 aa7.24□□□□□ -1.25
PUF3YLL013C YKU70P32807 602 aa7.23□□□□□ -1.25
PUF3YLL013C GRX6Q12438 231 aa7.23□□□□□ -1.25
PUF3YLL013C RPS9BP05755 195 aaKnown RBP7.23□□□□□ -1.25
PUF3YLL013C DNM1P54861 757 aa7.23□□□□□ -1.25
PUF3YLL013C SSK22P25390 1331 aaPredicted RBP7.23□□□□□ -1.25
PUF3YLL013C FRD1P32614 470 aaKnown RBP7.22□□□□□ -1.25
PUF3YLL013C FAS2P19097 1887 aaKnown RBP7.22□□□□□ -1.25
PUF3YLL013C SHC1P39000 512 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms