RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeastyeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF1YKR059W GLN1P32288 370 aaKnown RBP9.14□□□□□ -0.95
TIF1YKR059W RTG1P32607 177 aa9.14□□□□□ -0.95
TIF1YKR059W VHR2P40041 505 aa9.14□□□□□ -0.95
TIF1YKR059W PDR5P33302 1511 aaKnown RBP9.14□□□□□ -0.95
TIF1YKR059W PSE1P32337 1089 aaKnown RBP9.13□□□□□ -0.95
TIF1YKR059W ATG32P40458 529 aa9.11□□□□□ -0.95
TIF1YKR059W CFT1Q06632 1357 aaKnown RBP9.11□□□□□ -0.95
TIF1YKR059W SNU71P53207 620 aaKnown RBP9.09□□□□□ -0.95
TIF1YKR059W NCR1Q12200 1170 aa9.09□□□□□ -0.95
TIF1YKR059W NAP1P25293 417 aaKnown RBP9.08□□□□□ -0.96
TIF1YKR059W YBL036CP38197 257 aa9.08□□□□□ -0.96
TIF1YKR059W TIF1P10081 395 aaKnown RBP9.06□□□□□ -0.96
TIF1YKR059W TEA1P47988 759 aa9.06□□□□□ -0.96
TIF1YKR059W ATH1P48016 1211 aa9.06□□□□□ -0.96
TIF1YKR059W YDR090CQ03193 310 aa9.06□□□□□ -0.96
TIF1YKR059W BCK1Q01389 1478 aa9.06□□□□□ -0.96
TIF1YKR059W YNL035CP53962 389 aaKnown RBP9.04□□□□□ -0.96
TIF1YKR059W CDC3P32457 520 aaKnown RBP9.03□□□□□ -0.96
TIF1YKR059W RAD54P32863 898 aa9.03□□□□□ -0.96
TIF1YKR059W SAM3Q08986 587 aa9.03□□□□□ -0.96
TIF1YKR059W CPS1P27614 576 aa9.02□□□□□ -0.97
TIF1YKR059W ORC1P54784 914 aaPredicted RBP9.02□□□□□ -0.97
TIF1YKR059W YPR204WQ08995 1032 aa9.02□□□□□ -0.97
TIF1YKR059W RTG2P32608 588 aaKnown RBP9.01□□□□□ -0.97
TIF1YKR059W YLR326WQ06170 240 aaKnown RBP9.01□□□□□ -0.97
TIF1YKR059W APP1P53933 587 aa9□□□□□ -0.97
TIF1YKR059W GRE2Q12068 342 aaKnown RBP9□□□□□ -0.97
TIF1YKR059W GUT1P32190 709 aa8.99□□□□□ -0.97
TIF1YKR059W PDR11P40550 1411 aa8.98□□□□□ -0.97
TIF1YKR059W CLB5P30283 435 aa8.98□□□□□ -0.97
TIF1YKR059W SEC61P32915 480 aa8.98□□□□□ -0.97
TIF1YKR059W MRX12P47084 519 aa8.98□□□□□ -0.97
TIF1YKR059W YNR029CP53729 429 aaKnown RBP8.98□□□□□ -0.97
TIF1YKR059W YMR074CQ04773 145 aa8.98□□□□□ -0.97
TIF1YKR059W GYP5Q12344 894 aa8.98□□□□□ -0.97
TIF1YKR059W TFG1P41895 735 aaPredicted RBP8.97□□□□□ -0.97
TIF1YKR059W GCN2P15442 1659 aa8.97□□□□□ -0.97
TIF1YKR059W KRE5P22023 1365 aa8.97□□□□□ -0.97
TIF1YKR059W ERG12P07277 443 aa8.96□□□□□ -0.98
TIF1YKR059W CSE4P36012 229 aa8.96□□□□□ -0.98
TIF1YKR059W TTI1P36097 1038 aa8.96□□□□□ -0.98
TIF1YKR059W IKI3Q06706 1349 aaKnown RBP8.96□□□□□ -0.98
TIF1YKR059W HEM3P28789 327 aa8.95□□□□□ -0.98
TIF1YKR059W DCW1P36091 449 aa8.95□□□□□ -0.98
TIF1YKR059W SIS2P36024 562 aa8.94□□□□□ -0.98
TIF1YKR059W RIA1P53893 1110 aa8.94□□□□□ -0.98
TIF1YKR059W TYW1Q08960 810 aaKnown RBP8.94□□□□□ -0.98
TIF1YKR059W YGR273CP53329 174 aa8.93□□□□□ -0.98
TIF1YKR059W NUP192P47054 1683 aa8.91□□□□□ -0.98
TIF1YKR059W KEX1P09620 729 aa8.91□□□□□ -0.98
TIF1YKR059W KTR1P27810 393 aaKnown RBP8.91□□□□□ -0.98
TIF1YKR059W PCS60P38137 543 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
TIF1YKR059W SAP30P38429 201 aa8.91□□□□□ -0.98
TIF1YKR059W YNL108CP53929 270 aa8.91□□□□□ -0.98
TIF1YKR059W HTA1P04911 132 aaKnown RBP8.9□□□□□ -0.98
TIF1YKR059W HTA2P04912 132 aa8.9□□□□□ -0.98
TIF1YKR059W BIO2P32451 375 aa8.9□□□□□ -0.98
TIF1YKR059W SSF1P38789 453 aaPredicted RBP8.9□□□□□ -0.98
TIF1YKR059W DAN4P47179 1161 aa8.9□□□□□ -0.98
TIF1YKR059W RAV1P47104 1357 aa8.89□□□□□ -0.99
TIF1YKR059W PKH3Q03306 898 aaPredicted RBP8.89□□□□□ -0.99
TIF1YKR059W JIP4Q03361 876 aa8.89□□□□□ -0.99
TIF1YKR059W NOB1Q08444 459 aaKnown RBP8.89□□□□□ -0.99
TIF1YKR059W MMP1Q12372 583 aa8.88□□□□□ -0.99
TIF1YKR059W RPP1BP10622 106 aaKnown RBP8.87□□□□□ -0.99
TIF1YKR059W ORC6P38826 435 aa8.87□□□□□ -0.99
TIF1YKR059W RAD59Q12223 238 aa8.87□□□□□ -0.99
TIF1YKR059W HAT1Q12341 374 aa8.87□□□□□ -0.99
TIF1YKR059W ASF1P32447 279 aa8.86□□□□□ -0.99
TIF1YKR059W RRN6P32786 894 aa8.86□□□□□ -0.99
TIF1YKR059W YEL023CP39992 682 aa8.86□□□□□ -0.99
TIF1YKR059W HST2P53686 357 aa8.86□□□□□ -0.99
TIF1YKR059W ENT1Q12518 454 aa8.86□□□□□ -0.99
TIF1YKR059W ENV9Q08651 330 aa8.85□□□□□ -0.99
TIF1YKR059W YRF1-2P40105 1681 aa8.85□□□□□ -0.99
TIF1YKR059W SPT5P27692 1063 aaKnown RBP8.84□□□□□ -0.99
TIF1YKR059W PTC4P38089 393 aa8.84□□□□□ -0.99
TIF1YKR059W IOC4Q04213 475 aa8.84□□□□□ -0.99
TIF1YKR059W RGR1P19263 1082 aa8.83□□□□□ -1
TIF1YKR059W IMH1Q06704 911 aaKnown RBP8.83□□□□□ -1
TIF1YKR059W ARG8P18544 423 aa8.82□□□□□ -1
TIF1YKR059W ALD4P46367 519 aaKnown RBP8.82□□□□□ -1
TIF1YKR059W FPK1P53739 893 aa8.82□□□□□ -1
TIF1YKR059W SSM4P40318 1319 aa8.81□□□□□ -1
TIF1YKR059W NIS1P53939 407 aa8.81□□□□□ -1
TIF1YKR059W YDL129WQ07555 291 aa8.81□□□□□ -1
TIF1YKR059W PAM1P37304 830 aaKnown RBP8.8□□□□□ -1
TIF1YKR059W STM1P39015 273 aaKnown RBP8.8□□□□□ -1
TIF1YKR059W SEN54Q02825 467 aaPredicted RBP8.8□□□□□ -1
TIF1YKR059W EDE1P34216 1381 aa8.8□□□□□ -1
TIF1YKR059W TY3B-IQ7LHG5 1498 aaKnown RBP8.8□□□□□ -1
TIF1YKR059W RRP5Q05022 1729 aaKnown RBP8.8□□□□□ -1
TIF1YKR059W RTC1Q08281 1341 aa8.8□□□□□ -1
TIF1YKR059W SUP45P12385 437 aaKnown RBP8.79□□□□□ -1
TIF1YKR059W ESS1P22696 170 aa8.79□□□□□ -1
TIF1YKR059W PUP1P25043 261 aa8.79□□□□□ -1
TIF1YKR059W MVP1P40959 511 aaKnown RBP8.79□□□□□ -1
TIF1YKR059W SEC20P28791 383 aa8.78□□□□□ -1
TIF1YKR059W ENO1P00924 437 aaKnown RBP8.77□□□□□ -1.01
TIF1YKR059W CAB1Q04430 367 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms