RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	TYW1	Q08960	810 aa	Known RBP	7.42	□□□□□ -1.22
RPT1	YKL145W	KRE5	P22023	1365 aa		7.41	□□□□□ -1.22
RPT1	YKL145W	KIC1	P38692	1080 aa		7.41	□□□□□ -1.22
RPT1	YKL145W	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.4	□□□□□ -1.22
RPT1	YKL145W	RTG2	P32608	588 aa	Known RBP	7.4	□□□□□ -1.22
RPT1	YKL145W	TEA1	P47988	759 aa		7.4	□□□□□ -1.22
RPT1	YKL145W	YOR238W	Q08634	303 aa		7.4	□□□□□ -1.22
RPT1	YKL145W	ESL2	P36168	1195 aa		7.39	□□□□□ -1.23
RPT1	YKL145W	ORC6	P38826	435 aa		7.39	□□□□□ -1.23
RPT1	YKL145W	POL5	P39985	1022 aa	Known RBP	7.39	□□□□□ -1.23
RPT1	YKL145W	CAB1	Q04430	367 aa		7.39	□□□□□ -1.23
RPT1	YKL145W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.38	□□□□□ -1.23	not detected
RPT1	YKL145W	MAP2	P38174	421 aa	Known RBP	7.38	□□□□□ -1.23
RPT1	YKL145W	YML083C	Q04526	418 aa		7.38	□□□□□ -1.23
RPT1	YKL145W	PUP1	P25043	261 aa		7.37	□□□□□ -1.23
RPT1	YKL145W	RAD54	P32863	898 aa		7.37	□□□□□ -1.23
RPT1	YKL145W	ALD4	P46367	519 aa	Known RBP	7.37	□□□□□ -1.23
RPT1	YKL145W	UBP10	P53874	792 aa	Predicted RBP	7.37	□□□□□ -1.23
RPT1	YKL145W	YGR273C	P53329	174 aa		7.36	□□□□□ -1.23
RPT1	YKL145W	RIA1	P53893	1110 aa		7.36	□□□□□ -1.23
RPT1	YKL145W	TY1B-NL2	Q99337	1749 aa	Known RBP	7.36	□□□□□ -1.23
RPT1	YKL145W	KIP3	P53086	805 aa	Known RBP	7.35	□□□□□ -1.23
RPT1	YKL145W	YNL108C	P53929	270 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	TAF8	Q03750	510 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	HAT1	Q12341	374 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	YLR419W	Q06698	1435 aa	Known RBP	7.35	□□□□□ -1.23
RPT1	YKL145W	KEX1	P09620	729 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	SUP45	P12385	437 aa	Known RBP	7.35	□□□□□ -1.23
RPT1	YKL145W	GUT1	P32190	709 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	CSE4	P36012	229 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	ATH1	P48016	1211 aa		7.35	□□□□□ -1.23
RPT1	YKL145W	CFT1	Q06632	1357 aa	Known RBP	7.34	□□□□□ -1.23
RPT1	YKL145W	RAD59	Q12223	238 aa		7.34	□□□□□ -1.23
RPT1	YKL145W	GRE2	Q12068	342 aa	Known RBP	7.33	□□□□□ -1.24
RPT1	YKL145W	VMA1	P17255	1071 aa	Known RBP	7.32	□□□□□ -1.24
RPT1	YKL145W	SLX5	P32828	619 aa	Known RBP	7.32	□□□□□ -1.24
RPT1	YKL145W	HST2	P53686	357 aa		7.32	□□□□□ -1.24
RPT1	YKL145W	RGR1	P19263	1082 aa		7.31	□□□□□ -1.24
RPT1	YKL145W	SPE2	P21182	396 aa		7.31	□□□□□ -1.24
RPT1	YKL145W	CLB5	P30283	435 aa		7.31	□□□□□ -1.24
RPT1	YKL145W	SIS2	P36024	562 aa		7.31	□□□□□ -1.24
RPT1	YKL145W	ENO1	P00924	437 aa	Known RBP	7.3	□□□□□ -1.24
RPT1	YKL145W	SOL3	P38858	249 aa		7.3	□□□□□ -1.24
RPT1	YKL145W	NIS1	P53939	407 aa		7.3	□□□□□ -1.24
RPT1	YKL145W	MRX10	Q05648	414 aa		7.3	□□□□□ -1.24
RPT1	YKL145W	YNR029C	P53729	429 aa	Known RBP	7.29	□□□□□ -1.24
RPT1	YKL145W	FPK1	P53739	893 aa		7.29	□□□□□ -1.24
RPT1	YKL145W	PKH3	Q03306	898 aa	Predicted RBP	7.29	□□□□□ -1.24
RPT1	YKL145W	MHP1	P43638	1398 aa		7.28	□□□□□ -1.24
RPT1	YKL145W	ENO2	P00925	437 aa	Known RBP	7.28	□□□□□ -1.24
RPT1	YKL145W	THI12	P42883	340 aa		7.28	□□□□□ -1.24
RPT1	YKL145W	THI5	P43534	340 aa		7.28	□□□□□ -1.24
RPT1	YKL145W	THI11	P47183	340 aa		7.28	□□□□□ -1.24
RPT1	YKL145W	THI13	Q07748	340 aa		7.28	□□□□□ -1.24
RPT1	YKL145W	ESS1	P22696	170 aa		7.27	□□□□□ -1.24
RPT1	YKL145W	ASF1	P32447	279 aa		7.27	□□□□□ -1.24
RPT1	YKL145W	OCA5	P38738	679 aa		7.27	□□□□□ -1.24
RPT1	YKL145W	STM1	P39015	273 aa	Known RBP	7.27	□□□□□ -1.24
RPT1	YKL145W	TGL4	P36165	910 aa		7.27	□□□□□ -1.25
RPT1	YKL145W	RIM21	P48565	533 aa		7.27	□□□□□ -1.25
RPT1	YKL145W	YMR196W	Q04336	1088 aa		7.27	□□□□□ -1.25
RPT1	YKL145W	MMP1	Q12372	583 aa		7.27	□□□□□ -1.25
RPT1	YKL145W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
RPT1	YKL145W	SPT5	P27692	1063 aa	Known RBP	7.26	□□□□□ -1.25
RPT1	YKL145W	MVP1	P40959	511 aa	Known RBP	7.26	□□□□□ -1.25
RPT1	YKL145W	RCM1	P53972	490 aa		7.26	□□□□□ -1.25
RPT1	YKL145W	YDJ1	P25491	409 aa	Known RBP	7.25	□□□□□ -1.25
RPT1	YKL145W	YJU3	P28321	313 aa		7.25	□□□□□ -1.25
RPT1	YKL145W	PIB1	Q06651	286 aa		7.25	□□□□□ -1.25
RPT1	YKL145W	GAP1	P19145	602 aa	Predicted RBP	7.24	□□□□□ -1.25
RPT1	YKL145W	SCJ1	P25303	377 aa		7.24	□□□□□ -1.25
RPT1	YKL145W	CHZ1	P40019	153 aa	Predicted RBP	7.24	□□□□□ -1.25
RPT1	YKL145W	RRP15	Q06511	250 aa	Predicted RBP	7.24	□□□□□ -1.25
RPT1	YKL145W	SEC20	P28791	383 aa		7.23	□□□□□ -1.25
RPT1	YKL145W	PPH3	P32345	308 aa		7.23	□□□□□ -1.25
RPT1	YKL145W	ALD2	P47771	506 aa		7.23	□□□□□ -1.25
RPT1	YKL145W	NST1	P53935	1240 aa		7.23	□□□□□ -1.25
RPT1	YKL145W	YBL113C	Q7M4S9	792 aa		7.23	□□□□□ -1.25
RPT1	YKL145W	BRN1	P38170	754 aa		7.22	□□□□□ -1.25
RPT1	YKL145W	DOS2	P54858	310 aa		7.22	□□□□□ -1.25
RPT1	YKL145W	SAM3	Q08986	587 aa		7.22	□□□□□ -1.25
RPT1	YKL145W	PEP12	P32854	288 aa		7.21	□□□□□ -1.25
RPT1	YKL145W	PDS5	Q04264	1277 aa		7.21	□□□□□ -1.25
RPT1	YKL145W	SPT7	P35177	1332 aa		7.21	□□□□□ -1.26
RPT1	YKL145W	MAK16	P10962	306 aa	Predicted RBP	7.2	□□□□□ -1.26
RPT1	YKL145W	ARG8	P18544	423 aa		7.2	□□□□□ -1.26
RPT1	YKL145W	SIT4	P20604	311 aa		7.2	□□□□□ -1.26
RPT1	YKL145W	SCT1	P32784	759 aa		7.2	□□□□□ -1.26
RPT1	YKL145W	ERP5	P38819	212 aa		7.2	□□□□□ -1.26
RPT1	YKL145W	PSK1	P31374	1356 aa		7.2	□□□□□ -1.26
RPT1	YKL145W	SPC42	P36094	363 aa		7.19	□□□□□ -1.26
RPT1	YKL145W	MSC6	Q08818	692 aa	Known RBP	7.19	□□□□□ -1.26
RPT1	YKL145W	YML133C	Q03099	1374 aa		7.19	□□□□□ -1.26
RPT1	YKL145W	YLL067C	Q07888	1374 aa		7.19	□□□□□ -1.26
RPT1	YKL145W	YLL066C	Q99208	1374 aa		7.19	□□□□□ -1.26
RPT1	YKL145W	RSC30	P38781	883 aa		7.18	□□□□□ -1.26
RPT1	YKL145W	SEC3	P33332	1336 aa	Known RBP	7.18	□□□□□ -1.26
RPT1	YKL145W	ILV3	P39522	585 aa	Known RBP	7.18	□□□□□ -1.26
RPT1	YKL145W	YAP5	P40574	245 aa		7.18	□□□□□ -1.26
RPT1	YKL145W	RDS2	P19541	446 aa	Known RBP	7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms