RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W RAD59Q12223 238 aa7.18□□□□□ -1.26
SWD2YKL018W GUA1P38625 525 aaKnown RBP7.17□□□□□ -1.26
SWD2YKL018W IXR1P33417 597 aa7.15□□□□□ -1.26
SWD2YKL018W RSC30P38781 883 aa7.15□□□□□ -1.26
SWD2YKL018W BRL1P38770 471 aa7.12□□□□□ -1.27
SWD2YKL018W MSB3P48566 633 aaPredicted RBP7.12□□□□□ -1.27
SWD2YKL018W HPC2Q01448 625 aa7.1□□□□□ -1.27
SWD2YKL018W LEO1P38439 464 aa7.08□□□□□ -1.28
SWD2YKL018W HPF1Q05164 967 aa7.08□□□□□ -1.28
SWD2YKL018W YLR346CQ06139 101 aa7.08□□□□□ -1.28
SWD2YKL018W OPT2Q06593 877 aa7.07□□□□□ -1.28
SWD2YKL018W VAC17P25591 423 aa7.06□□□□□ -1.28
SWD2YKL018W UGA3P26370 528 aa7.06□□□□□ -1.28
SWD2YKL018W YBL036CP38197 257 aa7.06□□□□□ -1.28
SWD2YKL018W HGH1P48362 394 aaKnown RBP7.06□□□□□ -1.28
SWD2YKL018W TFB3Q03290 321 aa7.06□□□□□ -1.28
SWD2YKL018W ICP55P40051 511 aa7.05□□□□□ -1.28
SWD2YKL018W PUS1Q12211 544 aaKnown RBP7.05□□□□□ -1.28
SWD2YKL018W MAK16P10962 306 aaPredicted RBP7.04□□□□□ -1.28
SWD2YKL018W TEC1P18412 486 aa7.04□□□□□ -1.28
SWD2YKL018W LSB3P43603 459 aaKnown RBP7.04□□□□□ -1.28
SWD2YKL018W YPR204WQ08995 1032 aa7.04□□□□□ -1.28
SWD2YKL018W SRF1Q12516 437 aa7.03□□□□□ -1.28
SWD2YKL018W CSE4P36012 229 aa7.02□□□□□ -1.29
SWD2YKL018W YIR007WP40566 764 aa7.02□□□□□ -1.29
SWD2YKL018W GLY1P37303 387 aaKnown RBP7.01□□□□□ -1.29
SWD2YKL018W FIG4P42837 879 aa7.01□□□□□ -1.29
SWD2YKL018W APP1P53933 587 aa7□□□□□ -1.29
SWD2YKL018W MRT4P33201 236 aaKnown RBP6.99□□□□□ -1.29
SWD2YKL018W PTK2P47116 818 aaKnown RBP6.99□□□□□ -1.29
SWD2YKL018W ITT1Q04638 464 aa6.99□□□□□ -1.29
SWD2YKL018W PKC1P24583 1151 aa6.98□□□□□ -1.29
SWD2YKL018W GUT2P32191 649 aa6.98□□□□□ -1.29
SWD2YKL018W NRD1P53617 575 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
SWD2YKL018W NAF1P53919 492 aaKnown RBP6.98□□□□□ -1.29
SWD2YKL018W RTT106P40161 455 aa6.97□□□□□ -1.29
SWD2YKL018W SPT5P27692 1063 aaKnown RBP6.96□□□□□ -1.3
SWD2YKL018W SCW11P53189 542 aa6.96□□□□□ -1.3
SWD2YKL018W STE20Q03497 939 aaKnown RBP6.96□□□□□ -1.3
SWD2YKL018W EMW1P42842 904 aaKnown RBP6.94□□□□□ -1.3
SWD2YKL018W YJL007CP47080 104 aa6.93□□□□□ -1.3
SWD2YKL018W PHM7Q12252 991 aa6.93□□□□□ -1.3
SWD2YKL018W TY1A-BLQ12266 440 aa6.93□□□□□ -1.3
SWD2YKL018W MKS1P34072 584 aa6.92□□□□□ -1.3
SWD2YKL018W YBL086CP38177 466 aa6.92□□□□□ -1.3
SWD2YKL018W NUP85P46673 744 aa6.92□□□□□ -1.3
SWD2YKL018W ARG82P07250 355 aa6.91□□□□□ -1.3
SWD2YKL018W YDJ1P25491 409 aaKnown RBP6.91□□□□□ -1.3
SWD2YKL018W MIP1P15801 1254 aa6.9□□□□□ -1.3
SWD2YKL018W ISF1P32488 338 aa6.9□□□□□ -1.3
SWD2YKL018W EMP47P43555 445 aa6.9□□□□□ -1.3
SWD2YKL018W YNL108CP53929 270 aa6.9□□□□□ -1.3
SWD2YKL018W YPR084WQ06821 456 aa6.9□□□□□ -1.3
SWD2YKL018W ATG20Q07528 640 aa6.89□□□□□ -1.31
SWD2YKL018W FRA1Q07825 749 aa6.89□□□□□ -1.31
SWD2YKL018W MCM16Q12262 181 aa6.89□□□□□ -1.31
SWD2YKL018W BIO2P32451 375 aa6.88□□□□□ -1.31
SWD2YKL018W RPL34BP40525 121 aaKnown RBP6.88□□□□□ -1.31
SWD2YKL018W YPP1P46951 817 aa6.88□□□□□ -1.31
SWD2YKL018W DFG5Q05031 458 aa6.88□□□□□ -1.31
SWD2YKL018W BDS1Q08347 646 aa6.88□□□□□ -1.31
SWD2YKL018W MRX12P47084 519 aa6.87□□□□□ -1.31
SWD2YKL018W DPH6Q12429 685 aa6.87□□□□□ -1.31
SWD2YKL018W FBP26P32604 452 aa6.86□□□□□ -1.31
SWD2YKL018W RPP2BP02400 110 aaKnown RBP6.85□□□□□ -1.31
SWD2YKL018W AAD14P42884 376 aa6.85□□□□□ -1.31
SWD2YKL018W ATG3P40344 310 aa6.84□□□□□ -1.31
SWD2YKL018W LSC2P53312 427 aa6.84□□□□□ -1.31
SWD2YKL018W BIM1P40013 344 aa6.83□□□□□ -1.32
SWD2YKL018W ENO2P00925 437 aaKnown RBP6.82□□□□□ -1.32
SWD2YKL018W SUP45P12385 437 aaKnown RBP6.82□□□□□ -1.32
SWD2YKL018W DMA2P53924 522 aa6.82□□□□□ -1.32
SWD2YKL018W ISU1Q03020 165 aa6.82□□□□□ -1.32
SWD2YKL018W ISR1Q06098 443 aaKnown RBP6.82□□□□□ -1.32
SWD2YKL018W DLD1P32891 587 aa6.81□□□□□ -1.32
SWD2YKL018W DLD3P39976 496 aaKnown RBP6.81□□□□□ -1.32
SWD2YKL018W ATG32P40458 529 aa6.8□□□□□ -1.32
SWD2YKL018W UBP2Q01476 1272 aa6.8□□□□□ -1.32
SWD2YKL018W TIF1P10081 395 aaKnown RBP6.79□□□□□ -1.32
SWD2YKL018W STE6P12866 1290 aa6.79□□□□□ -1.32
SWD2YKL018W DAT1P13483 248 aaKnown RBP6.79□□□□□ -1.32
SWD2YKL018W RTG2P32608 588 aaKnown RBP6.79□□□□□ -1.32
SWD2YKL018W SOH1P38633 127 aa6.78□□□□□ -1.32
SWD2YKL018W TBS1P38114 1094 aa6.77□□□□□ -1.33
SWD2YKL018W UTR2P32623 467 aa6.76□□□□□ -1.33
SWD2YKL018W MDJ1P35191 511 aa6.76□□□□□ -1.33
SWD2YKL018W YJR098CP47139 656 aa6.76□□□□□ -1.33
SWD2YKL018W RIM21P48565 533 aa6.76□□□□□ -1.33
SWD2YKL018W TCB1Q12466 1186 aa6.76□□□□□ -1.33
SWD2YKL018W UTP13Q05946 817 aaKnown RBP6.75□□□□□ -1.33
SWD2YKL018W APL6P46682 809 aa6.74□□□□□ -1.33
SWD2YKL018W ROG3P43602 733 aa6.73□□□□□ -1.33
SWD2YKL018W LYS5P50113 272 aa6.73□□□□□ -1.33
SWD2YKL018W ENO1P00924 437 aaKnown RBP6.72□□□□□ -1.33
SWD2YKL018W CCT8P47079 568 aaKnown RBP6.72□□□□□ -1.33
SWD2YKL018W NSG2P53898 299 aa6.72□□□□□ -1.33
SWD2YKL018W WTM2Q12206 467 aa6.72□□□□□ -1.33
SWD2YKL018W HAL5P38970 855 aaKnown RBP6.71□□□□□ -1.34
SWD2YKL018W JJJ3P47138 172 aa6.71□□□□□ -1.34
SWD2YKL018W TY1A-MR1Q04215 440 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms