RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A ITT1Q04638 464 aa6.69□□□□□ -1.34
SFT1YKL006C-A UGA3P26370 528 aa6.68□□□□□ -1.34
SFT1YKL006C-A APP1P53933 587 aa6.67□□□□□ -1.34
SFT1YKL006C-A YJL007CP47080 104 aa6.66□□□□□ -1.34
SFT1YKL006C-A GUT2P32191 649 aa6.65□□□□□ -1.34
SFT1YKL006C-A NAF1P53919 492 aaKnown RBP6.65□□□□□ -1.34
SFT1YKL006C-A YDJ1P25491 409 aaKnown RBP6.64□□□□□ -1.35
SFT1YKL006C-A MRT4P33201 236 aaKnown RBP6.64□□□□□ -1.35
SFT1YKL006C-A YJR115WP47152 169 aa6.64□□□□□ -1.35
SFT1YKL006C-A STE20Q03497 939 aaKnown RBP6.64□□□□□ -1.35
SFT1YKL006C-A SRF1Q12516 437 aa6.64□□□□□ -1.35
SFT1YKL006C-A SPT5P27692 1063 aaKnown RBP6.63□□□□□ -1.35
SFT1YKL006C-A MSB3P48566 633 aaPredicted RBP6.63□□□□□ -1.35
SFT1YKL006C-A DMA2P53924 522 aa6.63□□□□□ -1.35
SFT1YKL006C-A YNL108CP53929 270 aa6.62□□□□□ -1.35
SFT1YKL006C-A EMW1P42842 904 aaKnown RBP6.61□□□□□ -1.35
SFT1YKL006C-A ISF1P32488 338 aa6.6□□□□□ -1.35
SFT1YKL006C-A EMP47P43555 445 aa6.6□□□□□ -1.35
SFT1YKL006C-A YPR084WQ06821 456 aa6.6□□□□□ -1.35
SFT1YKL006C-A BIO2P32451 375 aa6.59□□□□□ -1.35
SFT1YKL006C-A RTT106P40161 455 aa6.59□□□□□ -1.35
SFT1YKL006C-A GAR1P28007 205 aaKnown RBP6.58□□□□□ -1.36
SFT1YKL006C-A MKS1P34072 584 aa6.58□□□□□ -1.36
SFT1YKL006C-A BIM1P40013 344 aa6.58□□□□□ -1.36
SFT1YKL006C-A RPL34BP40525 121 aaKnown RBP6.58□□□□□ -1.36
SFT1YKL006C-A FRA1Q07825 749 aa6.58□□□□□ -1.36
SFT1YKL006C-A MCM16Q12262 181 aa6.58□□□□□ -1.36
SFT1YKL006C-A GBP2P25555 427 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SFT1YKL006C-A YBL086CP38177 466 aa6.57□□□□□ -1.36
SFT1YKL006C-A PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
SFT1YKL006C-A SUP45P12385 437 aaKnown RBP6.56□□□□□ -1.36
SFT1YKL006C-A MET22P32179 357 aa6.56□□□□□ -1.36
SFT1YKL006C-A YPP1P46951 817 aa6.56□□□□□ -1.36
SFT1YKL006C-A ATG20Q07528 640 aa6.56□□□□□ -1.36
SFT1YKL006C-A ARG82P07250 355 aa6.55□□□□□ -1.36
SFT1YKL006C-A ATG32P40458 529 aa6.55□□□□□ -1.36
SFT1YKL006C-A MRX12P47084 519 aa6.55□□□□□ -1.36
SFT1YKL006C-A DFG5Q05031 458 aa6.55□□□□□ -1.36
SFT1YKL006C-A ENO2P00925 437 aaKnown RBP6.54□□□□□ -1.36
SFT1YKL006C-A YDR444WQ04093 687 aa6.54□□□□□ -1.36
SFT1YKL006C-A BDS1Q08347 646 aa6.54□□□□□ -1.36
SFT1YKL006C-A ENV9Q08651 330 aa6.54□□□□□ -1.36
SFT1YKL006C-A YLR346CQ06139 101 aa6.53□□□□□ -1.36
SFT1YKL006C-A TIF1P10081 395 aaKnown RBP6.52□□□□□ -1.37
SFT1YKL006C-A FBP26P32604 452 aa6.52□□□□□ -1.37
SFT1YKL006C-A RTG2P32608 588 aaKnown RBP6.52□□□□□ -1.37
SFT1YKL006C-A NUP85P46673 744 aa6.51□□□□□ -1.37
SFT1YKL006C-A ISR1Q06098 443 aaKnown RBP6.51□□□□□ -1.37
SFT1YKL006C-A ATG3P40344 310 aa6.5□□□□□ -1.37
SFT1YKL006C-A AAD14P42884 376 aa6.5□□□□□ -1.37
SFT1YKL006C-A ISU1Q03020 165 aa6.5□□□□□ -1.37
SFT1YKL006C-A LSC2P53312 427 aa6.49□□□□□ -1.37
SFT1YKL006C-A LCB5Q06147 687 aaKnown RBP6.49□□□□□ -1.37
SFT1YKL006C-A RPP2BP02400 110 aaKnown RBP6.48□□□□□ -1.37
SFT1YKL006C-A SOH1P38633 127 aa6.48□□□□□ -1.37
SFT1YKL006C-A OPT2Q06593 877 aa6.48□□□□□ -1.37
SFT1YKL006C-A STE6P12866 1290 aa6.47□□□□□ -1.37
SFT1YKL006C-A DAT1P13483 248 aaKnown RBP6.47□□□□□ -1.37
SFT1YKL006C-A DLD1P32891 587 aa6.47□□□□□ -1.37
SFT1YKL006C-A RIM21P48565 533 aa6.47□□□□□ -1.37
SFT1YKL006C-A YPR204WQ08995 1032 aa6.46□□□□□ -1.38
SFT1YKL006C-A ENO1P00924 437 aaKnown RBP6.45□□□□□ -1.38
SFT1YKL006C-A MIP1P15801 1254 aa6.45□□□□□ -1.38
SFT1YKL006C-A DLD3P39976 496 aaKnown RBP6.45□□□□□ -1.38
SFT1YKL006C-A APL6P46682 809 aa6.45□□□□□ -1.38
SFT1YKL006C-A UBP2Q01476 1272 aa6.44□□□□□ -1.38
SFT1YKL006C-A UTP13Q05946 817 aaKnown RBP6.44□□□□□ -1.38
SFT1YKL006C-A UTR2P32623 467 aa6.43□□□□□ -1.38
SFT1YKL006C-A TBS1P38114 1094 aa6.43□□□□□ -1.38
SFT1YKL006C-A HAL5P38970 855 aaKnown RBP6.42□□□□□ -1.38
SFT1YKL006C-A YJR098CP47139 656 aa6.42□□□□□ -1.38
SFT1YKL006C-A SCW11P53189 542 aa6.42□□□□□ -1.38
SFT1YKL006C-A MRX10Q05648 414 aa6.42□□□□□ -1.38
SFT1YKL006C-A TCB1Q12466 1186 aa6.42□□□□□ -1.38
SFT1YKL006C-A HDA3Q06623 655 aa6.41□□□□□ -1.38
SFT1YKL006C-A WTM2Q12206 467 aa6.41□□□□□ -1.38
SFT1YKL006C-A RDS2P19541 446 aaKnown RBP6.4□□□□□ -1.38
SFT1YKL006C-A GLY1P37303 387 aaKnown RBP6.4□□□□□ -1.38
SFT1YKL006C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38 RIP-Chip
SFT1YKL006C-A SPT2P06843 333 aaPredicted RBP6.39□□□□□ -1.39
SFT1YKL006C-A KTR7P40504 517 aa6.38□□□□□ -1.39
SFT1YKL006C-A CAF120P53836 1060 aa6.38□□□□□ -1.39
SFT1YKL006C-A TY1A-BLQ12266 440 aa6.37□□□□□ -1.39
SFT1YKL006C-A UTP7P40055 554 aaKnown RBP6.36□□□□□ -1.39
SFT1YKL006C-A ALA1P40825 983 aaKnown RBP6.36□□□□□ -1.39
SFT1YKL006C-A OSH7P38755 437 aa6.35□□□□□ -1.39
SFT1YKL006C-A YFL034WP43564 1073 aa6.35□□□□□ -1.39
SFT1YKL006C-A YPL062WQ02781 134 aa6.35□□□□□ -1.39
SFT1YKL006C-A PDI1P17967 522 aaKnown RBP6.34□□□□□ -1.39
SFT1YKL006C-A ACO2P39533 789 aa6.34□□□□□ -1.39
SFT1YKL006C-A AIM9P40053 627 aaKnown RBP6.34□□□□□ -1.39
SFT1YKL006C-A SLX8P40072 274 aa6.34□□□□□ -1.39
SFT1YKL006C-A PEP12P32854 288 aa6.33□□□□□ -1.4
SFT1YKL006C-A SIS2P36024 562 aa6.33□□□□□ -1.4
SFT1YKL006C-A DAL1P32375 460 aa6.32□□□□□ -1.4
SFT1YKL006C-A NTH2P35172 780 aa6.32□□□□□ -1.4
SFT1YKL006C-A YDL176WQ12027 708 aa6.32□□□□□ -1.4
SFT1YKL006C-A TSC13Q99190 310 aa6.32□□□□□ -1.4
SFT1YKL006C-A SWI5P08153 709 aa6.31□□□□□ -1.4
SFT1YKL006C-A YIR007WP40566 764 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms