RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W TBF1Q02457 562 aa5.44□□□□□ -1.54
PFD1YJL179W SLY41P22215 453 aa5.43□□□□□ -1.54
PFD1YJL179W YDL206WQ12424 762 aa5.43□□□□□ -1.54
PFD1YJL179W DLD1P32891 587 aa5.42□□□□□ -1.54
PFD1YJL179W PUS6P53294 404 aa5.42□□□□□ -1.54
PFD1YJL179W NIS1P53939 407 aa5.42□□□□□ -1.54
PFD1YJL179W YBL086CP38177 466 aa5.41□□□□□ -1.54
PFD1YJL179W AI1P03875 834 aa5.4□□□□□ -1.54
PFD1YJL179W THI72Q08579 599 aa5.4□□□□□ -1.54
PFD1YJL179W PBS2P08018 668 aa5.39□□□□□ -1.55
PFD1YJL179W SBP1P10080 294 aaKnown RBP5.39□□□□□ -1.55
PFD1YJL179W YFL066CP43538 392 aa5.37□□□□□ -1.55
PFD1YJL179W CKB1P43639 278 aa5.37□□□□□ -1.55
PFD1YJL179W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
PFD1YJL179W FPK1P53739 893 aa5.35□□□□□ -1.55
PFD1YJL179W YMR196WQ04336 1088 aa5.35□□□□□ -1.55
PFD1YJL179W MAM3Q12296 706 aa5.35□□□□□ -1.55
PFD1YJL179W YPR053CQ6Q5F3 151 aa5.35□□□□□ -1.55
PFD1YJL179W VAC17P25591 423 aa5.34□□□□□ -1.55
PFD1YJL179W TRM1P15565 570 aaKnown RBP5.32□□□□□ -1.56
PFD1YJL179W EMW1P42842 904 aaKnown RBP5.3□□□□□ -1.56
PFD1YJL179W NAM8Q00539 523 aaKnown RBP5.3□□□□□ -1.56
PFD1YJL179W CDC19P00549 500 aaKnown RBP5.29□□□□□ -1.56
PFD1YJL179W SKN7P38889 622 aa5.29□□□□□ -1.56
PFD1YJL179W APP1P53933 587 aa5.28□□□□□ -1.56
PFD1YJL179W CEM1P39525 442 aa5.26□□□□□ -1.57
PFD1YJL179W IES2P40154 320 aa5.26□□□□□ -1.57
PFD1YJL179W CUZ1P53899 274 aa5.26□□□□□ -1.57
PFD1YJL179W VTC4P47075 721 aa5.25□□□□□ -1.57
PFD1YJL179W HST2P53686 357 aa5.25□□□□□ -1.57
PFD1YJL179W ADE12P80210 433 aaKnown RBP5.25□□□□□ -1.57
PFD1YJL179W YMR187CQ03236 431 aa5.25□□□□□ -1.57
PFD1YJL179W NUP42P49686 430 aaKnown RBP5.23□□□□□ -1.57
PFD1YJL179W SCJ1P25303 377 aa5.22□□□□□ -1.57
PFD1YJL179W MKS1P34072 584 aa5.22□□□□□ -1.57
PFD1YJL179W DSF2P38213 736 aa5.22□□□□□ -1.57
PFD1YJL179W DFG5Q05031 458 aa5.21□□□□□ -1.58
PFD1YJL179W TDA6Q06466 467 aa5.21□□□□□ -1.58
PFD1YJL179W BDS1Q08347 646 aa5.21□□□□□ -1.58
PFD1YJL179W MMP1Q12372 583 aa5.2□□□□□ -1.58
PFD1YJL179W ITT1Q04638 464 aa5.19□□□□□ -1.58
PFD1YJL179W SYT1Q06836 1226 aa5.18□□□□□ -1.58
PFD1YJL179W SBE2P42223 864 aaKnown RBP5.17□□□□□ -1.58
PFD1YJL179W GLN1P32288 370 aaKnown RBP5.16□□□□□ -1.58
PFD1YJL179W DAL1P32375 460 aa5.16□□□□□ -1.58
PFD1YJL179W DIT1P21623 536 aa5.15□□□□□ -1.59
PFD1YJL179W MCX1P38323 520 aaPredicted RBP5.15□□□□□ -1.59
PFD1YJL179W YMR265CQ03508 461 aaKnown RBP5.15□□□□□ -1.59
PFD1YJL179W STE6P12866 1290 aa5.14□□□□□ -1.59
PFD1YJL179W FBP26P32604 452 aa5.14□□□□□ -1.59
PFD1YJL179W YDR461C-AQ2V2P7 80 aa5.14□□□□□ -1.59
PFD1YJL179W DIT2P21595 489 aa5.13□□□□□ -1.59
PFD1YJL179W YNR014WP53719 212 aa5.13□□□□□ -1.59
PFD1YJL179W ESS1P22696 170 aa5.11□□□□□ -1.59
PFD1YJL179W UBP15P50101 1230 aa5.11□□□□□ -1.59
PFD1YJL179W KRE33P53914 1056 aaKnown RBP5.11□□□□□ -1.59
PFD1YJL179W RSC30P38781 883 aa5.1□□□□□ -1.59
PFD1YJL179W YCK2P23292 546 aaKnown RBP5.09□□□□□ -1.59
PFD1YJL179W MAC1P35192 417 aa5.09□□□□□ -1.59
PFD1YJL179W AMN1P38285 549 aaPredicted RBP5.09□□□□□ -1.59
PFD1YJL179W FIG4P42837 879 aa5.09□□□□□ -1.59
PFD1YJL179W RPP2BP02400 110 aaKnown RBP5.07□□□□□ -1.6
PFD1YJL179W YJU3P28321 313 aa5.07□□□□□ -1.6
PFD1YJL179W DLD3P39976 496 aaKnown RBP5.07□□□□□ -1.6
PFD1YJL179W IRC24P40580 263 aa5.07□□□□□ -1.6
PFD1YJL179W YDR215CQ12240 137 aa5.07□□□□□ -1.6
PFD1YJL179W BOI2P39969 1040 aa5.06□□□□□ -1.6
PFD1YJL179W LSB6P42951 607 aa5.06□□□□□ -1.6
PFD1YJL179W MET1P36150 593 aa5.04□□□□□ -1.6
PFD1YJL179W ISU1Q03020 165 aa5.04□□□□□ -1.6
PFD1YJL179W GPM1P00950 247 aaKnown RBP5.03□□□□□ -1.6
PFD1YJL179W MSN5P52918 1224 aa5.03□□□□□ -1.6
PFD1YJL179W GLT1Q12680 2145 aaKnown RBP5.03□□□□□ -1.6
PFD1YJL179W TEC1P18412 486 aa5.02□□□□□ -1.61
PFD1YJL179W TAT1P38085 619 aa5.02□□□□□ -1.61
PFD1YJL179W SLN1P39928 1220 aaPredicted RBP5.02□□□□□ -1.61
PFD1YJL179W MCA1Q08601 432 aa5.01□□□□□ -1.61
PFD1YJL179W SLA1P32790 1244 aa5□□□□□ -1.61
PFD1YJL179W ARG8P18544 423 aa4.99□□□□□ -1.61
PFD1YJL179W ATF2P53296 535 aa4.99□□□□□ -1.61
PFD1YJL179W FPS1P23900 669 aa4.98□□□□□ -1.61
PFD1YJL179W SPB4P25808 606 aaPredicted RBP4.98□□□□□ -1.61
PFD1YJL179W SSN3P39073 555 aa4.98□□□□□ -1.61
PFD1YJL179W YPL034WQ03083 165 aa4.98□□□□□ -1.61
PFD1YJL179W PKH3Q03306 898 aaPredicted RBP4.98□□□□□ -1.61
PFD1YJL179W YPR084WQ06821 456 aa4.98□□□□□ -1.61
PFD1YJL179W ATG20Q07528 640 aa4.98□□□□□ -1.61
PFD1YJL179W AHP1P38013 176 aaKnown RBP4.97□□□□□ -1.61
PFD1YJL179W TY1A-DR3Q12441 440 aa4.96□□□□□ -1.62
PFD1YJL179W KNS1P32350 737 aaPredicted RBP4.94□□□□□ -1.62
PFD1YJL179W NAF1P53919 492 aaKnown RBP4.94□□□□□ -1.62
PFD1YJL179W ALO1P54783 526 aaKnown RBP4.94□□□□□ -1.62
PFD1YJL179W GUT2P32191 649 aa4.93□□□□□ -1.62
PFD1YJL179W OMA1P36163 345 aa4.93□□□□□ -1.62
PFD1YJL179W INP52P50942 1183 aa4.92□□□□□ -1.62
PFD1YJL179W PDC5P16467 563 aaKnown RBP4.91□□□□□ -1.62
PFD1YJL179W WTM2Q12206 467 aa4.91□□□□□ -1.62
PFD1YJL179W PRY1P47032 299 aa4.9□□□□□ -1.63
PFD1YJL179W KTR1P27810 393 aaKnown RBP4.89□□□□□ -1.63
PFD1YJL179W SAS10Q12136 610 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms