RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C MRT4P33201 236 aaKnown RBP6.41□□□□□ -1.38
ATG27YJL178C CSE4P36012 229 aa6.41□□□□□ -1.38
ATG27YJL178C BRE2P43132 505 aa6.41□□□□□ -1.38
ATG27YJL178C YBL036CP38197 257 aa6.4□□□□□ -1.38
ATG27YJL178C TEC1P18412 486 aa6.38□□□□□ -1.39
ATG27YJL178C HST3P53687 447 aa6.38□□□□□ -1.39
ATG27YJL178C NAF1P53919 492 aaKnown RBP6.38□□□□□ -1.39
ATG27YJL178C BIO2P32451 375 aa6.37□□□□□ -1.39
ATG27YJL178C YDJ1P25491 409 aaKnown RBP6.36□□□□□ -1.39
ATG27YJL178C EMW1P42842 904 aaKnown RBP6.36□□□□□ -1.39
ATG27YJL178C YJR115WP47152 169 aa6.36□□□□□ -1.39
ATG27YJL178C APP1P53933 587 aa6.36□□□□□ -1.39
ATG27YJL178C GCR2Q01722 534 aa6.36□□□□□ -1.39
ATG27YJL178C MSB3P48566 633 aaPredicted RBP6.35□□□□□ -1.39
ATG27YJL178C SPT5P27692 1063 aaKnown RBP6.34□□□□□ -1.39
ATG27YJL178C YBL086CP38177 466 aa6.34□□□□□ -1.39
ATG27YJL178C GUT2P32191 649 aa6.33□□□□□ -1.4
ATG27YJL178C FRA1Q07825 749 aa6.33□□□□□ -1.4
ATG27YJL178C SUP45P12385 437 aaKnown RBP6.32□□□□□ -1.4
ATG27YJL178C UGA3P26370 528 aa6.32□□□□□ -1.4
ATG27YJL178C MCM16Q12262 181 aa6.32□□□□□ -1.4
ATG27YJL178C GAR1P28007 205 aaKnown RBP6.31□□□□□ -1.4
ATG27YJL178C YJL007CP47080 104 aa6.31□□□□□ -1.4
ATG27YJL178C MET22P32179 357 aa6.3□□□□□ -1.4
ATG27YJL178C ISF1P32488 338 aa6.3□□□□□ -1.4
ATG27YJL178C YNL108CP53929 270 aa6.3□□□□□ -1.4
ATG27YJL178C EMP47P43555 445 aa6.29□□□□□ -1.4
ATG27YJL178C APL6P46682 809 aa6.29□□□□□ -1.4
ATG27YJL178C PTK2P47116 818 aaKnown RBP6.29□□□□□ -1.4
ATG27YJL178C STE20Q03497 939 aaKnown RBP6.29□□□□□ -1.4
ATG27YJL178C ENO2P00925 437 aaKnown RBP6.28□□□□□ -1.4
ATG27YJL178C BIM1P40013 344 aa6.28□□□□□ -1.4
ATG27YJL178C ATG32P40458 529 aa6.28□□□□□ -1.4
ATG27YJL178C MKS1P34072 584 aa6.27□□□□□ -1.41
ATG27YJL178C RTT106P40161 455 aa6.27□□□□□ -1.41
ATG27YJL178C TAF7Q05021 590 aa6.27□□□□□ -1.41
ATG27YJL178C GBP2P25555 427 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
ATG27YJL178C DFG5Q05031 458 aa6.26□□□□□ -1.41
ATG27YJL178C ENV9Q08651 330 aa6.26□□□□□ -1.41
ATG27YJL178C MRX12P47084 519 aa6.25□□□□□ -1.41
ATG27YJL178C FBP26P32604 452 aa6.24□□□□□ -1.41
ATG27YJL178C AAD14P42884 376 aa6.24□□□□□ -1.41
ATG27YJL178C RIM21P48565 533 aa6.24□□□□□ -1.41
ATG27YJL178C YDR444WQ04093 687 aa6.24□□□□□ -1.41
ATG27YJL178C ATG20Q07528 640 aa6.24□□□□□ -1.41
ATG27YJL178C TIF1P10081 395 aaKnown RBP6.23□□□□□ -1.41
ATG27YJL178C STE6P12866 1290 aa6.23□□□□□ -1.41
ATG27YJL178C NUP85P46673 744 aa6.23□□□□□ -1.41
ATG27YJL178C LCB5Q06147 687 aaKnown RBP6.23□□□□□ -1.41
ATG27YJL178C SRF1Q12516 437 aa6.23□□□□□ -1.41
ATG27YJL178C RDS2P19541 446 aaKnown RBP6.22□□□□□ -1.41
ATG27YJL178C YPP1P46951 817 aa6.22□□□□□ -1.41
ATG27YJL178C ISU1Q03020 165 aa6.22□□□□□ -1.41
ATG27YJL178C ARG82P07250 355 aa6.21□□□□□ -1.42
ATG27YJL178C HAL5P38970 855 aaKnown RBP6.21□□□□□ -1.42
ATG27YJL178C MRX10Q05648 414 aa6.21□□□□□ -1.42
ATG27YJL178C OPT2Q06593 877 aa6.21□□□□□ -1.42
ATG27YJL178C ISR1Q06098 443 aaKnown RBP6.2□□□□□ -1.42
ATG27YJL178C BDS1Q08347 646 aa6.2□□□□□ -1.42
ATG27YJL178C ENO1P00924 437 aaKnown RBP6.19□□□□□ -1.42
ATG27YJL178C DLD1P32891 587 aa6.19□□□□□ -1.42
ATG27YJL178C SOH1P38633 127 aa6.18□□□□□ -1.42
ATG27YJL178C RPL34BP40525 121 aaKnown RBP6.18□□□□□ -1.42
ATG27YJL178C YJR098CP47139 656 aa6.18□□□□□ -1.42
ATG27YJL178C RTG2P32608 588 aaKnown RBP6.17□□□□□ -1.42
ATG27YJL178C UTP13Q05946 817 aaKnown RBP6.17□□□□□ -1.42
ATG27YJL178C ATG3P40344 310 aa6.16□□□□□ -1.42
ATG27YJL178C YDL176WQ12027 708 aa6.16□□□□□ -1.42
ATG27YJL178C RLF2Q12495 606 aa6.16□□□□□ -1.42
ATG27YJL178C SPT2P06843 333 aaPredicted RBP6.15□□□□□ -1.42
ATG27YJL178C GLY1P37303 387 aaKnown RBP6.15□□□□□ -1.42
ATG27YJL178C LSC2P53312 427 aa6.15□□□□□ -1.42
ATG27YJL178C YLR346CQ06139 101 aa6.15□□□□□ -1.42
ATG27YJL178C PEP12P32854 288 aa6.14□□□□□ -1.43
ATG27YJL178C YPR204WQ08995 1032 aa6.14□□□□□ -1.43
ATG27YJL178C WTM2Q12206 467 aa6.14□□□□□ -1.43
ATG27YJL178C MIP1P15801 1254 aa6.13□□□□□ -1.43
ATG27YJL178C ACO2P39533 789 aa6.13□□□□□ -1.43
ATG27YJL178C HDA3Q06623 655 aa6.13□□□□□ -1.43
ATG27YJL178C TY1A-BLQ12266 440 aa6.13□□□□□ -1.43
ATG27YJL178C TCB1Q12466 1186 aa6.13□□□□□ -1.43
ATG27YJL178C UTR2P32623 467 aa6.12□□□□□ -1.43
ATG27YJL178C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
ATG27YJL178C DAT1P13483 248 aaKnown RBP6.1□□□□□ -1.43
ATG27YJL178C SLX8P40072 274 aa6.1□□□□□ -1.43
ATG27YJL178C SCW11P53189 542 aa6.1□□□□□ -1.43
ATG27YJL178C UBP2Q01476 1272 aa6.1□□□□□ -1.43
ATG27YJL178C SIS2P36024 562 aa6.09□□□□□ -1.43
ATG27YJL178C CAF120P53836 1060 aa6.09□□□□□ -1.43
ATG27YJL178C RPP2BP02400 110 aaKnown RBP6.08□□□□□ -1.44
ATG27YJL178C OSH7P38755 437 aa6.08□□□□□ -1.44
ATG27YJL178C DLD3P39976 496 aaKnown RBP6.08□□□□□ -1.44
ATG27YJL178C SSN3P39073 555 aa6.07□□□□□ -1.44
ATG27YJL178C YIR007WP40566 764 aa6.07□□□□□ -1.44
ATG27YJL178C VTC4P47075 721 aa6.07□□□□□ -1.44
ATG27YJL178C CDC19P00549 500 aaKnown RBP6.06□□□□□ -1.44
ATG27YJL178C DAL1P32375 460 aa6.06□□□□□ -1.44
ATG27YJL178C TTI1P36097 1038 aa6.06□□□□□ -1.44
ATG27YJL178C TBS1P38114 1094 aa6.06□□□□□ -1.44
ATG27YJL178C UTP7P40055 554 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms