RNA–Protein interactions for RNA: YJL034W

KAR2, Transcript of ATPase involved in protein import into the ER, yeast

Gene KAR2, Length 2,049 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR2	YJL034W	SLM3	Q12093	417 aa		5.8	□□□□□ -1.48
KAR2	YJL034W	HSP104	P31539	908 aa	Known RBP	5.79	□□□□□ -1.48
KAR2	YJL034W	AVT3	P36062	692 aa		5.79	□□□□□ -1.48
KAR2	YJL034W	PRP45	P28004	379 aa	Predicted RBP	5.79	□□□□□ -1.48
KAR2	YJL034W	PTP3	P40048	928 aa		5.79	□□□□□ -1.48
KAR2	YJL034W	MNN4	P36044	1178 aa		5.78	□□□□□ -1.48
KAR2	YJL034W	PUF6	Q04373	656 aa	Known RBP	5.78	□□□□□ -1.48
KAR2	YJL034W	YPP1	P46951	817 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	MSB3	P48566	633 aa	Predicted RBP	5.77	□□□□□ -1.49
KAR2	YJL034W	SRT1	Q03175	343 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	TCB1	Q12466	1186 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	LYS2	P07702	1392 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	TRP5	P00931	707 aa	Known RBP	5.77	□□□□□ -1.49
KAR2	YJL034W	UGA3	P26370	528 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	MIF2	P35201	549 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	YIR014W	P40570	242 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	XKS1	P42826	600 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	NSE3	Q05541	303 aa		5.77	□□□□□ -1.49
KAR2	YJL034W	ECM16	Q04217	1267 aa	Known RBP	5.76	□□□□□ -1.49
KAR2	YJL034W	BMS1	Q08965	1183 aa	Known RBP	5.76	□□□□□ -1.49
KAR2	YJL034W	RSF2	P46974	1380 aa		5.76	□□□□□ -1.49
KAR2	YJL034W	KCC4	P25389	1037 aa		5.75	□□□□□ -1.49
KAR2	YJL034W	RCR1	P38212	213 aa		5.75	□□□□□ -1.49
KAR2	YJL034W	YBR287W	P38355	427 aa		5.75	□□□□□ -1.49
KAR2	YJL034W	COQ4	O13525	335 aa		5.74	□□□□□ -1.49
KAR2	YJL034W	NUP145	P49687	1317 aa		5.74	□□□□□ -1.49
KAR2	YJL034W	SNF7	P39929	240 aa	Known RBP	5.74	□□□□□ -1.49
KAR2	YJL034W	CSI1	Q04368	295 aa		5.74	□□□□□ -1.49
KAR2	YJL034W	YNG2	P38806	282 aa	Known RBP	5.73	□□□□□ -1.49
KAR2	YJL034W	RPS19A	P07280	144 aa	Known RBP	5.72	□□□□□ -1.49
KAR2	YJL034W	RPS19B	P07281	144 aa	Predicted RBP	5.72	□□□□□ -1.49
KAR2	YJL034W	DJP1	P40564	432 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	YOL057W	Q08225	711 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	NOP8	Q08287	484 aa	Predicted RBP	5.72	□□□□□ -1.49
KAR2	YJL034W	AIM44	Q99299	758 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	YRF1-3	P0CX14	1859 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	YRF1-7	P0CX15	1859 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	YRF1-6	P53819	1859 aa		5.72	□□□□□ -1.49
KAR2	YJL034W	INP54	Q08227	384 aa	Known RBP	5.72	□□□□□ -1.49
KAR2	YJL034W	MEC3	Q02574	474 aa		5.71	□□□□□ -1.5
KAR2	YJL034W	SPO1	P53541	631 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	MRP7	P12687	371 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	RAD4	P14736	754 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	REB1	P21538	810 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	ILV3	P39522	585 aa	Known RBP	5.7	□□□□□ -1.5
KAR2	YJL034W	HGH1	P48362	394 aa	Known RBP	5.7	□□□□□ -1.5
KAR2	YJL034W	ENT1	Q12518	454 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	RAD50	P12753	1312 aa		5.7	□□□□□ -1.5
KAR2	YJL034W	ROX1	P25042	368 aa		5.69	□□□□□ -1.5
KAR2	YJL034W	RAD24	P32641	659 aa		5.69	□□□□□ -1.5
KAR2	YJL034W	NMD2	P38798	1089 aa	Known RBP	5.69	□□□□□ -1.5
KAR2	YJL034W	YDR306C	Q06640	478 aa		5.69	□□□□□ -1.5
KAR2	YJL034W	IES2	P40154	320 aa		5.69	□□□□□ -1.5
KAR2	YJL034W	NKP2	Q06162	153 aa		5.69	□□□□□ -1.5
KAR2	YJL034W	GCD7	P32502	381 aa	Predicted RBP	5.68	□□□□□ -1.5
KAR2	YJL034W	SLN1	P39928	1220 aa	Predicted RBP	5.68	□□□□□ -1.5
KAR2	YJL034W	ALE1	Q08548	619 aa		5.68	□□□□□ -1.5
KAR2	YJL034W	PCT1	P13259	424 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	OSM1	P21375	501 aa	Known RBP	5.67	□□□□□ -1.5
KAR2	YJL034W	ADE16	P54113	591 aa	Known RBP	5.67	□□□□□ -1.5
KAR2	YJL034W	DNM1	P54861	757 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	RFC1	P38630	861 aa	Known RBP	5.67	□□□□□ -1.5
KAR2	YJL034W	BOI2	P39969	1040 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	CST6	P40535	587 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	YGR122W	P53272	402 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	ATG13	Q06628	738 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	ENV9	Q08651	330 aa		5.67	□□□□□ -1.5
KAR2	YJL034W	RIM15	P43565	1770 aa		5.66	□□□□□ -1.5
KAR2	YJL034W	YKL133C	P36066	463 aa		5.66	□□□□□ -1.5
KAR2	YJL034W	RMT2	Q03305	412 aa		5.66	□□□□□ -1.5
KAR2	YJL034W	ROM2	P51862	1356 aa	Known RBP	5.66	□□□□□ -1.5
KAR2	YJL034W	YAH1	Q12184	172 aa	Known RBP	5.65	□□□□□ -1.5
KAR2	YJL034W	CDC16	P09798	840 aa		5.65	□□□□□ -1.51
KAR2	YJL034W	NUP133	P36161	1157 aa		5.65	□□□□□ -1.51
KAR2	YJL034W	YJR008W	P47085	338 aa		5.65	□□□□□ -1.51
KAR2	YJL034W	YBP2	P53169	641 aa		5.65	□□□□□ -1.51
KAR2	YJL034W	SWI1	P09547	1314 aa		5.65	□□□□□ -1.51
KAR2	YJL034W	VPS24	P36095	224 aa	Known RBP	5.64	□□□□□ -1.51
KAR2	YJL034W	ZDS2	P54786	942 aa		5.64	□□□□□ -1.51
KAR2	YJL034W	GCR2	Q01722	534 aa		5.64	□□□□□ -1.51
KAR2	YJL034W	FRK1	Q03002	865 aa	Predicted RBP	5.64	□□□□□ -1.51
KAR2	YJL034W	DLD1	P32891	587 aa		5.64	□□□□□ -1.51
KAR2	YJL034W	BDP1	P46678	594 aa		5.64	□□□□□ -1.51
KAR2	YJL034W	IMH1	Q06704	911 aa	Known RBP	5.64	□□□□□ -1.51
KAR2	YJL034W	LSP1	Q12230	341 aa	Known RBP	5.64	□□□□□ -1.51
KAR2	YJL034W	SWC3	P31376	625 aa		5.63	□□□□□ -1.51
KAR2	YJL034W	CTR9	P89105	1077 aa		5.63	□□□□□ -1.51
KAR2	YJL034W	SSP2	Q08646	371 aa		5.63	□□□□□ -1.51
KAR2	YJL034W	NOP53	Q12080	455 aa	Known RBP	5.63	□□□□□ -1.51
KAR2	YJL034W	RLF2	Q12495	606 aa		5.63	□□□□□ -1.51
KAR2	YJL034W	SPT21	P35209	758 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	VPS64	Q03944	604 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	NCB2	Q92317	146 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	BRN1	P38170	754 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	UBP12	P39538	1254 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	ITC1	P53125	1264 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	MDG1	P53885	366 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	APP1	P53933	587 aa		5.62	□□□□□ -1.51
KAR2	YJL034W	SSF1	P38789	453 aa	Predicted RBP	5.61	□□□□□ -1.51
KAR2	YJL034W	VAS1	P07806	1104 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms