RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C AFT1P22149 690 aa5.22□□□□□ -1.57
TCD1YHR003C SPT5P27692 1063 aaKnown RBP5.22□□□□□ -1.57
TCD1YHR003C MRT4P33201 236 aaKnown RBP5.22□□□□□ -1.57
TCD1YHR003C ASH1P34233 588 aa5.22□□□□□ -1.57
TCD1YHR003C BRE2P43132 505 aa5.21□□□□□ -1.58
TCD1YHR003C MON2P48563 1636 aaPredicted RBP5.2□□□□□ -1.58
TCD1YHR003C RTT106P40161 455 aa5.2□□□□□ -1.58
TCD1YHR003C GUT2P32191 649 aa5.19□□□□□ -1.58
TCD1YHR003C MSB3P48566 633 aaPredicted RBP5.18□□□□□ -1.58
TCD1YHR003C YPR084WQ06821 456 aa5.18□□□□□ -1.58
TCD1YHR003C UGA3P26370 528 aa5.17□□□□□ -1.58
TCD1YHR003C EMW1P42842 904 aaKnown RBP5.17□□□□□ -1.58
TCD1YHR003C STE20Q03497 939 aaKnown RBP5.17□□□□□ -1.58
TCD1YHR003C FRA1Q07825 749 aa5.17□□□□□ -1.58
TCD1YHR003C INO80P53115 1489 aa5.17□□□□□ -1.58
TCD1YHR003C YDJ1P25491 409 aaKnown RBP5.16□□□□□ -1.58
TCD1YHR003C BIO2P32451 375 aa5.16□□□□□ -1.58
TCD1YHR003C YJL007CP47080 104 aa5.16□□□□□ -1.58
TCD1YHR003C MRX12P47084 519 aa5.16□□□□□ -1.58
TCD1YHR003C DMA2P53924 522 aa5.16□□□□□ -1.58
TCD1YHR003C APP1P53933 587 aa5.16□□□□□ -1.58
TCD1YHR003C SUP45P12385 437 aaKnown RBP5.15□□□□□ -1.59
TCD1YHR003C YPP1P46951 817 aa5.15□□□□□ -1.59
TCD1YHR003C YJR115WP47152 169 aa5.15□□□□□ -1.59
TCD1YHR003C ITT1Q04638 464 aa5.15□□□□□ -1.59
TCD1YHR003C MCM16Q12262 181 aa5.15□□□□□ -1.59
TCD1YHR003C YBL086CP38177 466 aa5.14□□□□□ -1.59
TCD1YHR003C YNL108CP53929 270 aa5.14□□□□□ -1.59
TCD1YHR003C BIM1P40013 344 aa5.13□□□□□ -1.59
TCD1YHR003C EMP47P43555 445 aa5.13□□□□□ -1.59
TCD1YHR003C MKS1P34072 584 aa5.12□□□□□ -1.59
TCD1YHR003C SRF1Q12516 437 aa5.12□□□□□ -1.59
TCD1YHR003C ENO2P00925 437 aaKnown RBP5.11□□□□□ -1.59
TCD1YHR003C ISF1P32488 338 aa5.11□□□□□ -1.59
TCD1YHR003C ATG32P40458 529 aa5.11□□□□□ -1.59
TCD1YHR003C RPL34BP40525 121 aaKnown RBP5.11□□□□□ -1.59
TCD1YHR003C PTK2P47116 818 aaKnown RBP5.11□□□□□ -1.59
TCD1YHR003C TAF7Q05021 590 aa5.11□□□□□ -1.59
TCD1YHR003C FBP26P32604 452 aa5.1□□□□□ -1.59
TCD1YHR003C ATG3P40344 310 aa5.1□□□□□ -1.59
TCD1YHR003C ATG20Q07528 640 aa5.1□□□□□ -1.59
TCD1YHR003C ARG82P07250 355 aa5.09□□□□□ -1.59
TCD1YHR003C TIF1P10081 395 aaKnown RBP5.09□□□□□ -1.59
TCD1YHR003C MET22P32179 357 aa5.09□□□□□ -1.59
TCD1YHR003C APL6P46682 809 aa5.09□□□□□ -1.59
TCD1YHR003C ENV9Q08651 330 aa5.09□□□□□ -1.59
TCD1YHR003C STE6P12866 1290 aa5.08□□□□□ -1.6
TCD1YHR003C NUP85P46673 744 aa5.08□□□□□ -1.6
TCD1YHR003C RIM21P48565 533 aa5.08□□□□□ -1.6
TCD1YHR003C ISU1Q03020 165 aa5.08□□□□□ -1.6
TCD1YHR003C DFG5Q05031 458 aa5.08□□□□□ -1.6
TCD1YHR003C BDS1Q08347 646 aa5.08□□□□□ -1.6
TCD1YHR003C RPP2BP02400 110 aaKnown RBP5.07□□□□□ -1.6
TCD1YHR003C RTG2P32608 588 aaKnown RBP5.07□□□□□ -1.6
TCD1YHR003C AAD14P42884 376 aa5.07□□□□□ -1.6
TCD1YHR003C YDR444WQ04093 687 aa5.07□□□□□ -1.6
TCD1YHR003C UTP13Q05946 817 aaKnown RBP5.07□□□□□ -1.6
TCD1YHR003C YLR346CQ06139 101 aa5.07□□□□□ -1.6
TCD1YHR003C LCB5Q06147 687 aaKnown RBP5.06□□□□□ -1.6
TCD1YHR003C LSC2P53312 427 aa5.05□□□□□ -1.6
TCD1YHR003C MRX10Q05648 414 aa5.05□□□□□ -1.6
TCD1YHR003C ISR1Q06098 443 aaKnown RBP5.05□□□□□ -1.6
TCD1YHR003C ENO1P00924 437 aaKnown RBP5.04□□□□□ -1.6
TCD1YHR003C GAR1P28007 205 aaKnown RBP5.04□□□□□ -1.6
TCD1YHR003C SOH1P38633 127 aa5.04□□□□□ -1.6
TCD1YHR003C SPT2P06843 333 aaPredicted RBP5.03□□□□□ -1.6
TCD1YHR003C GBP2P25555 427 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
TCD1YHR003C OPT2Q06593 877 aa5.03□□□□□ -1.6
TCD1YHR003C RDS2P19541 446 aaKnown RBP5.02□□□□□ -1.61
TCD1YHR003C HAL5P38970 855 aaKnown RBP5.02□□□□□ -1.61
TCD1YHR003C YPR204WQ08995 1032 aa5.02□□□□□ -1.61
TCD1YHR003C MIP1P15801 1254 aa5.01□□□□□ -1.61
TCD1YHR003C UTR2P32623 467 aa5.01□□□□□ -1.61
TCD1YHR003C DLD1P32891 587 aa5.01□□□□□ -1.61
TCD1YHR003C SIS2P36024 562 aa5.01□□□□□ -1.61
TCD1YHR003C GLY1P37303 387 aaKnown RBP5.01□□□□□ -1.61
TCD1YHR003C DLD3P39976 496 aaKnown RBP5.01□□□□□ -1.61
TCD1YHR003C YJR098CP47139 656 aa5.01□□□□□ -1.61
TCD1YHR003C UBP2Q01476 1272 aa5.01□□□□□ -1.61
TCD1YHR003C DAT1P13483 248 aaKnown RBP5□□□□□ -1.61
TCD1YHR003C TBS1P38114 1094 aa5□□□□□ -1.61
TCD1YHR003C HDA3Q06623 655 aa5□□□□□ -1.61
TCD1YHR003C WTM2Q12206 467 aa5□□□□□ -1.61
TCD1YHR003C PEP12P32854 288 aa4.99□□□□□ -1.61
TCD1YHR003C SCW11P53189 542 aa4.99□□□□□ -1.61
TCD1YHR003C TCB1Q12466 1186 aa4.99□□□□□ -1.61
TCD1YHR003C YFL034WP43564 1073 aa4.98□□□□□ -1.61
TCD1YHR003C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
TCD1YHR003C SLX8P40072 274 aa4.97□□□□□ -1.61
TCD1YHR003C VTC4P47075 721 aa4.97□□□□□ -1.61
TCD1YHR003C TY1A-BLQ12266 440 aa4.97□□□□□ -1.61
TCD1YHR003C ACO2P39533 789 aa4.96□□□□□ -1.62
TCD1YHR003C AIM9P40053 627 aaKnown RBP4.96□□□□□ -1.62
TCD1YHR003C DNA2P38859 1522 aa4.96□□□□□ -1.62
TCD1YHR003C DAL1P32375 460 aa4.95□□□□□ -1.62
TCD1YHR003C TTI1P36097 1038 aa4.95□□□□□ -1.62
TCD1YHR003C MSN5P52918 1224 aa4.95□□□□□ -1.62
TCD1YHR003C YPL062WQ02781 134 aa4.95□□□□□ -1.62
TCD1YHR003C OSH7P38755 437 aa4.94□□□□□ -1.62
TCD1YHR003C SUM1P46676 1062 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms