RNA–Protein interactions for RNA: YGR094W

VAS1, Transcript of Mitochondrial and cytoplasmic valyl-tRNA synthetase, yeast

Gene VAS1, Length 3,315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAS1	YGR094W	MSB4	Q12317	492 aa		4.27	□□□□□ -1.73
VAS1	YGR094W	YRF1-4	O13559	1382 aa		4.26	□□□□□ -1.73
VAS1	YGR094W	GRX1	P25373	110 aa	Known RBP	4.26	□□□□□ -1.73
VAS1	YGR094W	PFF1	P38244	976 aa		4.26	□□□□□ -1.73
VAS1	YGR094W	YER156C	P40093	338 aa	Known RBP	4.26	□□□□□ -1.73
VAS1	YGR094W	YKL133C	P36066	463 aa		4.25	□□□□□ -1.73
VAS1	YGR094W	YJL181W	P46987	611 aa		4.25	□□□□□ -1.73
VAS1	YGR094W	EAF6	P47128	113 aa		4.25	□□□□□ -1.73
VAS1	YGR094W	ESL2	P36168	1195 aa		4.24	□□□□□ -1.73
VAS1	YGR094W	SSK22	P25390	1331 aa	Predicted RBP	4.24	□□□□□ -1.73
VAS1	YGR094W	TAF5	P38129	798 aa		4.24	□□□□□ -1.73
VAS1	YGR094W	GLC3	P32775	704 aa		4.24	□□□□□ -1.73
VAS1	YGR094W	SHC1	P39000	512 aa		4.23	□□□□□ -1.73
VAS1	YGR094W	ERO1	Q03103	563 aa		4.23	□□□□□ -1.73
VAS1	YGR094W	GRE2	Q12068	342 aa	Known RBP	4.23	□□□□□ -1.73
VAS1	YGR094W	RTG2	P32608	588 aa	Known RBP	4.22	□□□□□ -1.73
VAS1	YGR094W	SDH2	P21801	266 aa		4.21	□□□□□ -1.73
VAS1	YGR094W	NCS6	P53088	359 aa		4.21	□□□□□ -1.73
VAS1	YGR094W	XKS1	P42826	600 aa		4.21	□□□□□ -1.74
VAS1	YGR094W	HGH1	P48362	394 aa	Known RBP	4.21	□□□□□ -1.74
VAS1	YGR094W	NST1	P53935	1240 aa		4.21	□□□□□ -1.74
VAS1	YGR094W	ATG20	Q07528	640 aa		4.21	□□□□□ -1.74
VAS1	YGR094W	MOT2	P34909	587 aa	Known RBP	4.2	□□□□□ -1.74
VAS1	YGR094W	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
VAS1	YGR094W	HVG1	P0CE11	249 aa		4.2	□□□□□ -1.74
VAS1	YGR094W	MSN5	P52918	1224 aa		4.2	□□□□□ -1.74
VAS1	YGR094W	NOP7	P53261	605 aa	Known RBP	4.19	□□□□□ -1.74
VAS1	YGR094W	CTF4	Q01454	927 aa		4.19	□□□□□ -1.74
VAS1	YGR094W	SEC3	P33332	1336 aa	Known RBP	4.19	□□□□□ -1.74
VAS1	YGR094W	TOP1	P04786	769 aa		4.19	□□□□□ -1.74
VAS1	YGR094W	SCT1	P32784	759 aa		4.19	□□□□□ -1.74
VAS1	YGR094W	RCM1	P53972	490 aa		4.19	□□□□□ -1.74
VAS1	YGR094W	AUS1	Q08409	1394 aa		4.19	□□□□□ -1.74
VAS1	YGR094W	YIL089W	P40500	205 aa		4.18	□□□□□ -1.74
VAS1	YGR094W	RET1	P22276	1149 aa	Known RBP	4.17	□□□□□ -1.74
VAS1	YGR094W	MDG1	P53885	366 aa		4.17	□□□□□ -1.74
VAS1	YGR094W	TIF6	Q12522	245 aa	Known RBP	4.17	□□□□□ -1.74
VAS1	YGR094W	LEU2	P04173	364 aa	Predicted RBP	4.17	□□□□□ -1.74
VAS1	YGR094W	ADE16	P54113	591 aa	Known RBP	4.17	□□□□□ -1.74
VAS1	YGR094W	DIB1	Q06819	143 aa	Predicted RBP	4.17	□□□□□ -1.74
VAS1	YGR094W	SIT4	P20604	311 aa		4.16	□□□□□ -1.74
VAS1	YGR094W	EAR1	Q03212	550 aa		4.16	□□□□□ -1.74
VAS1	YGR094W	CHZ1	P40019	153 aa	Predicted RBP	4.16	□□□□□ -1.74
VAS1	YGR094W	CST9	Q06032	482 aa		4.15	□□□□□ -1.74
VAS1	YGR094W	TAP42	Q04372	366 aa		4.15	□□□□□ -1.75
VAS1	YGR094W	PIB1	Q06651	286 aa		4.15	□□□□□ -1.75
VAS1	YGR094W	RCR1	P38212	213 aa		4.14	□□□□□ -1.75
VAS1	YGR094W	BRL1	P38770	471 aa		4.14	□□□□□ -1.75
VAS1	YGR094W	INP54	Q08227	384 aa	Known RBP	4.14	□□□□□ -1.75
VAS1	YGR094W	GRX6	Q12438	231 aa		4.14	□□□□□ -1.75
VAS1	YGR094W	RRT14	P40470	206 aa		4.14	□□□□□ -1.75
VAS1	YGR094W	ORC1	P54784	914 aa	Predicted RBP	4.14	□□□□□ -1.75
VAS1	YGR094W	TAF8	Q03750	510 aa		4.14	□□□□□ -1.75
VAS1	YGR094W	BSD2	P38356	321 aa		4.13	□□□□□ -1.75
VAS1	YGR094W	SSP1	P38871	571 aa		4.13	□□□□□ -1.75
VAS1	YGR094W	FAP1	P53971	965 aa		4.13	□□□□□ -1.75
VAS1	YGR094W	FLO1	P32768	1537 aa		4.13	□□□□□ -1.75
VAS1	YGR094W	DLD1	P32891	587 aa		4.13	□□□□□ -1.75
VAS1	YGR094W	AIM21	P40563	679 aa		4.12	□□□□□ -1.75
VAS1	YGR094W	SNU71	P53207	620 aa	Known RBP	4.12	□□□□□ -1.75
VAS1	YGR094W	YML020W	Q03722	664 aa		4.12	□□□□□ -1.75
VAS1	YGR094W	NUP145	P49687	1317 aa		4.12	□□□□□ -1.75
VAS1	YGR094W	SPB4	P25808	606 aa	Predicted RBP	4.12	□□□□□ -1.75
VAS1	YGR094W	YKR023W	P36119	530 aa	Known RBP	4.12	□□□□□ -1.75
VAS1	YGR094W	UBR2	Q07963	1872 aa		4.11	□□□□□ -1.75
VAS1	YGR094W	PHM7	Q12252	991 aa		4.11	□□□□□ -1.75
VAS1	YGR094W	UBP16	Q02863	499 aa		4.1	□□□□□ -1.75
VAS1	YGR094W	PSD2	P53037	1138 aa	Known RBP	4.1	□□□□□ -1.75
VAS1	YGR094W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
VAS1	YGR094W	OSM1	P21375	501 aa	Known RBP	4.09	□□□□□ -1.75
VAS1	YGR094W	WHI3	P34761	661 aa	Known RBP	4.09	□□□□□ -1.75
VAS1	YGR094W	MAL31	P38156	614 aa		4.09	□□□□□ -1.75
VAS1	YGR094W	PEA2	P40091	420 aa		4.09	□□□□□ -1.75
VAS1	YGR094W	SUB1	P54000	292 aa	Known RBP	4.09	□□□□□ -1.75
VAS1	YGR094W	FRK1	Q03002	865 aa	Predicted RBP	4.09	□□□□□ -1.75
VAS1	YGR094W	TIM50	Q02776	476 aa		4.09	□□□□□ -1.76
VAS1	YGR094W	GRX4	P32642	244 aa		4.08	□□□□□ -1.76
VAS1	YGR094W	RAT1	Q02792	1006 aa	Known RBP	4.08	□□□□□ -1.76
VAS1	YGR094W	RRT6	P53117	311 aa	Predicted RBP	4.08	□□□□□ -1.76
VAS1	YGR094W	YVH1	Q02256	364 aa	Known RBP	4.08	□□□□□ -1.76
VAS1	YGR094W	MOT1	P32333	1867 aa		4.08	□□□□□ -1.76
VAS1	YGR094W	CLA4	P48562	842 aa		4.08	□□□□□ -1.76
VAS1	YGR094W	MNN4	P36044	1178 aa		4.07	□□□□□ -1.76
VAS1	YGR094W	SQS1	P53866	767 aa	Known RBP	4.07	□□□□□ -1.76
VAS1	YGR094W	ECM30	Q06673	1274 aa		4.07	□□□□□ -1.76
VAS1	YGR094W	TUS1	Q06412	1307 aa		4.07	□□□□□ -1.76
VAS1	YGR094W	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
VAS1	YGR094W	RIX7	Q07844	837 aa	Known RBP	4.06	□□□□□ -1.76
VAS1	YGR094W	FKH1	P40466	484 aa		4.06	□□□□□ -1.76
VAS1	YGR094W	EMP47	P43555	445 aa		4.06	□□□□□ -1.76
VAS1	YGR094W	CSE4	P36012	229 aa		4.05	□□□□□ -1.76
VAS1	YGR094W	ENP1	P38333	483 aa	Known RBP	4.05	□□□□□ -1.76
VAS1	YGR094W	RSC30	P38781	883 aa		4.05	□□□□□ -1.76
VAS1	YGR094W	SLX8	P40072	274 aa		4.05	□□□□□ -1.76
VAS1	YGR094W	CWH41	P53008	833 aa		4.05	□□□□□ -1.76
VAS1	YGR094W	SMY1	P32364	656 aa	Known RBP	4.05	□□□□□ -1.76
VAS1	YGR094W	VPS72	Q03388	795 aa		4.05	□□□□□ -1.76
VAS1	YGR094W	RPS24A	P0CX31	135 aa	Known RBP	4.05	□□□□□ -1.76
VAS1	YGR094W	RPS24B	P0CX32	135 aa	Known RBP	4.05	□□□□□ -1.76
VAS1	YGR094W	YGR117C	P53270	476 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms