RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W NAF1P53919 492 aaKnown RBP5□□□□□ -1.61
NIC96YFR002W HST3P53687 447 aa4.99□□□□□ -1.61
NIC96YFR002W BIO2P32451 375 aa4.98□□□□□ -1.61
NIC96YFR002W MSB3P48566 633 aaPredicted RBP4.97□□□□□ -1.61
NIC96YFR002W EMW1P42842 904 aaKnown RBP4.97□□□□□ -1.61
NIC96YFR002W GCR2Q01722 534 aa4.97□□□□□ -1.61
NIC96YFR002W YDJ1P25491 409 aaKnown RBP4.96□□□□□ -1.61
NIC96YFR002W APP1P53933 587 aa4.96□□□□□ -1.61
NIC96YFR002W SPT5P27692 1063 aaKnown RBP4.96□□□□□ -1.62
NIC96YFR002W YJR115WP47152 169 aa4.96□□□□□ -1.62
NIC96YFR002W GUT2P32191 649 aa4.95□□□□□ -1.62
NIC96YFR002W FRA1Q07825 749 aa4.95□□□□□ -1.62
NIC96YFR002W YBL086CP38177 466 aa4.95□□□□□ -1.62
NIC96YFR002W MCM16Q12262 181 aa4.94□□□□□ -1.62
NIC96YFR002W UGA3P26370 528 aa4.94□□□□□ -1.62
NIC96YFR002W SUP45P12385 437 aaKnown RBP4.93□□□□□ -1.62
NIC96YFR002W ISF1P32488 338 aa4.93□□□□□ -1.62
NIC96YFR002W YJL007CP47080 104 aa4.93□□□□□ -1.62
NIC96YFR002W DMA2P53924 522 aa4.92□□□□□ -1.62
NIC96YFR002W YNL108CP53929 270 aa4.92□□□□□ -1.62
NIC96YFR002W STE20Q03497 939 aaKnown RBP4.92□□□□□ -1.62
NIC96YFR002W EMP47P43555 445 aa4.92□□□□□ -1.62
NIC96YFR002W PTK2P47116 818 aaKnown RBP4.92□□□□□ -1.62
NIC96YFR002W ENO2P00925 437 aaKnown RBP4.91□□□□□ -1.62
NIC96YFR002W MET22P32179 357 aa4.91□□□□□ -1.62
NIC96YFR002W RTT106P40161 455 aa4.91□□□□□ -1.62
NIC96YFR002W APL6P46682 809 aa4.91□□□□□ -1.62
NIC96YFR002W BIM1P40013 344 aa4.91□□□□□ -1.62
NIC96YFR002W HGH1P48362 394 aaKnown RBP4.91□□□□□ -1.62
NIC96YFR002W MKS1P34072 584 aa4.9□□□□□ -1.62
NIC96YFR002W ATG32P40458 529 aa4.9□□□□□ -1.62
NIC96YFR002W ENV9Q08651 330 aa4.89□□□□□ -1.63
NIC96YFR002W FBP26P32604 452 aa4.89□□□□□ -1.63
NIC96YFR002W MRX12P47084 519 aa4.89□□□□□ -1.63
NIC96YFR002W RIM21P48565 533 aa4.89□□□□□ -1.63
NIC96YFR002W DFG5Q05031 458 aa4.89□□□□□ -1.63
NIC96YFR002W AAD14P42884 376 aa4.88□□□□□ -1.63
NIC96YFR002W ATG20Q07528 640 aa4.88□□□□□ -1.63
NIC96YFR002W YDR444WQ04093 687 aa4.88□□□□□ -1.63
NIC96YFR002W TIF1P10081 395 aaKnown RBP4.87□□□□□ -1.63
NIC96YFR002W YPP1P46951 817 aa4.87□□□□□ -1.63
NIC96YFR002W LCB5Q06147 687 aaKnown RBP4.87□□□□□ -1.63
NIC96YFR002W SRF1Q12516 437 aa4.87□□□□□ -1.63
NIC96YFR002W STE6P12866 1290 aa4.87□□□□□ -1.63
NIC96YFR002W NUP85P46673 744 aa4.86□□□□□ -1.63
NIC96YFR002W ISU1Q03020 165 aa4.86□□□□□ -1.63
NIC96YFR002W ARG82P07250 355 aa4.86□□□□□ -1.63
NIC96YFR002W RDS2P19541 446 aaKnown RBP4.86□□□□□ -1.63
NIC96YFR002W GAR1P28007 205 aaKnown RBP4.85□□□□□ -1.63
NIC96YFR002W HAL5P38970 855 aaKnown RBP4.85□□□□□ -1.63
NIC96YFR002W MRX10Q05648 414 aa4.85□□□□□ -1.63
NIC96YFR002W ISR1Q06098 443 aaKnown RBP4.85□□□□□ -1.63
NIC96YFR002W OPT2Q06593 877 aa4.85□□□□□ -1.63
NIC96YFR002W BDS1Q08347 646 aa4.85□□□□□ -1.63
NIC96YFR002W ENO1P00924 437 aaKnown RBP4.84□□□□□ -1.64
NIC96YFR002W DLD1P32891 587 aa4.84□□□□□ -1.64
NIC96YFR002W RTG2P32608 588 aaKnown RBP4.83□□□□□ -1.64
NIC96YFR002W SOH1P38633 127 aa4.83□□□□□ -1.64
NIC96YFR002W UTP13Q05946 817 aaKnown RBP4.83□□□□□ -1.64
NIC96YFR002W YJR098CP47139 656 aa4.83□□□□□ -1.64
NIC96YFR002W RPL34BP40525 121 aaKnown RBP4.82□□□□□ -1.64
NIC96YFR002W ATG3P40344 310 aa4.82□□□□□ -1.64
NIC96YFR002W GLY1P37303 387 aaKnown RBP4.81□□□□□ -1.64
NIC96YFR002W LSC2P53312 427 aa4.81□□□□□ -1.64
NIC96YFR002W SPT2P06843 333 aaPredicted RBP4.81□□□□□ -1.64
NIC96YFR002W YDL176WQ12027 708 aa4.81□□□□□ -1.64
NIC96YFR002W YLR346CQ06139 101 aa4.8□□□□□ -1.64
NIC96YFR002W MIP1P15801 1254 aa4.8□□□□□ -1.64
NIC96YFR002W YPR204WQ08995 1032 aa4.8□□□□□ -1.64
NIC96YFR002W UTR2P32623 467 aa4.79□□□□□ -1.64
NIC96YFR002W PEP12P32854 288 aa4.79□□□□□ -1.64
NIC96YFR002W HDA3Q06623 655 aa4.79□□□□□ -1.64
NIC96YFR002W WTM2Q12206 467 aa4.79□□□□□ -1.64
NIC96YFR002W TY1A-BLQ12266 440 aa4.79□□□□□ -1.64
NIC96YFR002W TCB1Q12466 1186 aa4.79□□□□□ -1.64
NIC96YFR002W YPL062WQ02781 134 aa4.79□□□□□ -1.64
NIC96YFR002W GBP2P25555 427 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
NIC96YFR002W RGA1P39083 1007 aa4.78□□□□□ -1.64
NIC96YFR002W ACO2P39533 789 aa4.78□□□□□ -1.64
NIC96YFR002W SCW11P53189 542 aa4.78□□□□□ -1.64
NIC96YFR002W RPP2BP02400 110 aaKnown RBP4.77□□□□□ -1.65
NIC96YFR002W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
NIC96YFR002W SLX8P40072 274 aa4.77□□□□□ -1.65
NIC96YFR002W UBP2Q01476 1272 aa4.77□□□□□ -1.65
NIC96YFR002W DAT1P13483 248 aaKnown RBP4.76□□□□□ -1.65
NIC96YFR002W DLD3P39976 496 aaKnown RBP4.76□□□□□ -1.65
NIC96YFR002W CAF120P53836 1060 aa4.76□□□□□ -1.65
NIC96YFR002W VTC4P47075 721 aa4.76□□□□□ -1.65
NIC96YFR002W TBS1P38114 1094 aa4.74□□□□□ -1.65
NIC96YFR002W OSH7P38755 437 aa4.74□□□□□ -1.65
NIC96YFR002W AIM9P40053 627 aaKnown RBP4.74□□□□□ -1.65
NIC96YFR002W YIR007WP40566 764 aa4.74□□□□□ -1.65
NIC96YFR002W TTI1P36097 1038 aa4.74□□□□□ -1.65
NIC96YFR002W SSN3P39073 555 aa4.74□□□□□ -1.65
NIC96YFR002W UTP7P40055 554 aaKnown RBP4.74□□□□□ -1.65
NIC96YFR002W CDC19P00549 500 aaKnown RBP4.73□□□□□ -1.65
NIC96YFR002W DAL1P32375 460 aa4.73□□□□□ -1.65
NIC96YFR002W SWI5P08153 709 aa4.73□□□□□ -1.65
NIC96YFR002W MSN5P52918 1224 aa4.73□□□□□ -1.65
NIC96YFR002W SLA1P32790 1244 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms