RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W SIS2P36024 562 aa7.36□□□□□ -1.23
DEG1YFL001W RSC30P38781 883 aa7.36□□□□□ -1.23
DEG1YFL001W ENO2P00925 437 aaKnown RBP7.35□□□□□ -1.23
DEG1YFL001W MRX10Q05648 414 aa7.35□□□□□ -1.23
DEG1YFL001W ENO1P00924 437 aaKnown RBP7.34□□□□□ -1.23
DEG1YFL001W MAK16P10962 306 aaPredicted RBP7.34□□□□□ -1.23
DEG1YFL001W SLD2P34252 453 aa7.34□□□□□ -1.23
DEG1YFL001W PUP1P25043 261 aa7.33□□□□□ -1.24
DEG1YFL001W YDJ1P25491 409 aaKnown RBP7.33□□□□□ -1.24
DEG1YFL001W MRX12P47084 519 aa7.32□□□□□ -1.24
DEG1YFL001W RIM21P48565 533 aa7.32□□□□□ -1.24
DEG1YFL001W RTF1P53064 558 aa7.32□□□□□ -1.24
DEG1YFL001W LCB5Q06147 687 aaKnown RBP7.32□□□□□ -1.24
DEG1YFL001W SLY41P22215 453 aa7.31□□□□□ -1.24
DEG1YFL001W YNL115CP53925 644 aa7.3□□□□□ -1.24
DEG1YFL001W YML083CQ04526 418 aa7.3□□□□□ -1.24
DEG1YFL001W ASH1P34233 588 aa7.29□□□□□ -1.24
DEG1YFL001W SSF1P38789 453 aaPredicted RBP7.29□□□□□ -1.24
DEG1YFL001W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
DEG1YFL001W MET32Q12041 191 aa7.28□□□□□ -1.24
DEG1YFL001W AFT1P22149 690 aa7.27□□□□□ -1.24
DEG1YFL001W TGL4P36165 910 aa7.27□□□□□ -1.24
DEG1YFL001W YPP1P46951 817 aa7.27□□□□□ -1.24
DEG1YFL001W NAF1P53919 492 aaKnown RBP7.27□□□□□ -1.24
DEG1YFL001W TRM1P15565 570 aaKnown RBP7.26□□□□□ -1.25
DEG1YFL001W PEP12P32854 288 aa7.26□□□□□ -1.25
DEG1YFL001W HST3P53687 447 aa7.26□□□□□ -1.25
DEG1YFL001W SEN54Q02825 467 aaPredicted RBP7.25□□□□□ -1.25
DEG1YFL001W MOD5P07884 428 aa7.24□□□□□ -1.25
DEG1YFL001W PUS6P53294 404 aa7.24□□□□□ -1.25
DEG1YFL001W ERF2Q06551 359 aa7.24□□□□□ -1.25
DEG1YFL001W HAT1Q12341 374 aa7.24□□□□□ -1.25
DEG1YFL001W KEX2P13134 814 aa7.23□□□□□ -1.25
DEG1YFL001W RDS2P19541 446 aaKnown RBP7.23□□□□□ -1.25
DEG1YFL001W RRD1P40454 393 aaKnown RBP7.23□□□□□ -1.25
DEG1YFL001W MCM16Q12262 181 aa7.23□□□□□ -1.25
DEG1YFL001W AIM44Q99299 758 aa7.23□□□□□ -1.25
DEG1YFL001W HEM3P28789 327 aa7.22□□□□□ -1.25
DEG1YFL001W SNU71P53207 620 aaKnown RBP7.21□□□□□ -1.26
DEG1YFL001W NOP7P53261 605 aaKnown RBP7.21□□□□□ -1.26
DEG1YFL001W ORC1P54784 914 aaPredicted RBP7.21□□□□□ -1.26
DEG1YFL001W PAC1P39946 494 aaKnown RBP7.2□□□□□ -1.26
DEG1YFL001W MTC5Q03897 1148 aa7.18□□□□□ -1.26
DEG1YFL001W PUS5Q06244 254 aa7.18□□□□□ -1.26
DEG1YFL001W YJR115WP47152 169 aa7.17□□□□□ -1.26
DEG1YFL001W TBF1Q02457 562 aa7.17□□□□□ -1.26
DEG1YFL001W ECM23Q02710 187 aa7.17□□□□□ -1.26
DEG1YFL001W GAL2P13181 574 aa7.16□□□□□ -1.26
DEG1YFL001W STM1P39015 273 aaKnown RBP7.15□□□□□ -1.26
DEG1YFL001W KTR7P40504 517 aa7.15□□□□□ -1.26
DEG1YFL001W AGE1Q04412 482 aa7.15□□□□□ -1.26
DEG1YFL001W RRN6P32786 894 aa7.14□□□□□ -1.27
DEG1YFL001W ISF1P32488 338 aa7.13□□□□□ -1.27
DEG1YFL001W PAM1P37304 830 aaKnown RBP7.13□□□□□ -1.27
DEG1YFL001W EMP47P43555 445 aa7.13□□□□□ -1.27
DEG1YFL001W TUB4P53378 473 aa7.13□□□□□ -1.27
DEG1YFL001W YDL206WQ12424 762 aa7.13□□□□□ -1.27
DEG1YFL001W UBX7P38349 436 aa7.12□□□□□ -1.27
DEG1YFL001W YBL113CQ7M4S9 792 aa7.12□□□□□ -1.27
DEG1YFL001W RPA14P50106 137 aa7.11□□□□□ -1.27
DEG1YFL001W FRA1Q07825 749 aa7.11□□□□□ -1.27
DEG1YFL001W SEC20P28791 383 aa7.1□□□□□ -1.27
DEG1YFL001W CAF120P53836 1060 aa7.1□□□□□ -1.27
DEG1YFL001W TEC1P18412 486 aa7.09□□□□□ -1.27
DEG1YFL001W ASF1P32447 279 aa7.09□□□□□ -1.27
DEG1YFL001W ERP5P38819 212 aa7.09□□□□□ -1.27
DEG1YFL001W IPL1P38991 367 aa7.09□□□□□ -1.27
DEG1YFL001W ACO2P39533 789 aa7.09□□□□□ -1.27
DEG1YFL001W ATG3P40344 310 aa7.09□□□□□ -1.27
DEG1YFL001W MSB3P48566 633 aaPredicted RBP7.09□□□□□ -1.27
DEG1YFL001W STE20Q03497 939 aaKnown RBP7.09□□□□□ -1.27
DEG1YFL001W CWC15Q03772 175 aaKnown RBP7.09□□□□□ -1.27
DEG1YFL001W YPR097WQ06839 1073 aa7.09□□□□□ -1.27
DEG1YFL001W PHO87P25360 923 aa7.08□□□□□ -1.28
DEG1YFL001W GUT2P32191 649 aa7.08□□□□□ -1.28
DEG1YFL001W FIG4P42837 879 aa7.08□□□□□ -1.28
DEG1YFL001W YPR084WQ06821 456 aa7.08□□□□□ -1.28
DEG1YFL001W TPS3P38426 1054 aaKnown RBP7.07□□□□□ -1.28
DEG1YFL001W MET10P39692 1035 aa7.07□□□□□ -1.28
DEG1YFL001W PUF6Q04373 656 aaKnown RBP7.07□□□□□ -1.28
DEG1YFL001W UTP13Q05946 817 aaKnown RBP7.07□□□□□ -1.28
DEG1YFL001W MSC6Q08818 692 aaKnown RBP7.07□□□□□ -1.28
DEG1YFL001W APL6P46682 809 aa7.06□□□□□ -1.28
DEG1YFL001W KAR5Q04746 504 aa7.06□□□□□ -1.28
DEG1YFL001W ALR1Q08269 859 aa7.06□□□□□ -1.28
DEG1YFL001W TRL1P09880 827 aaKnown RBP7.05□□□□□ -1.28
DEG1YFL001W HAP4P14064 554 aa7.05□□□□□ -1.28
DEG1YFL001W TPD3P31383 635 aa7.05□□□□□ -1.28
DEG1YFL001W TRK2P28584 889 aa7.03□□□□□ -1.28
DEG1YFL001W ACS2P52910 683 aaKnown RBP7.03□□□□□ -1.28
DEG1YFL001W KXD1P53158 218 aa7.03□□□□□ -1.28
DEG1YFL001W SOH1P38633 127 aa7.02□□□□□ -1.28
DEG1YFL001W ROM1P53046 1155 aa7.02□□□□□ -1.28
DEG1YFL001W SYH1Q02875 849 aaKnown RBP7.02□□□□□ -1.28
DEG1YFL001W YLR346CQ06139 101 aa7.02□□□□□ -1.28
DEG1YFL001W PDC1P06169 563 aaKnown RBP7.01□□□□□ -1.29
DEG1YFL001W YHL050CP38721 697 aa7.01□□□□□ -1.29
DEG1YFL001W YHR219WP38900 624 aa7.01□□□□□ -1.29
DEG1YFL001W MDJ2P42834 146 aa7.01□□□□□ -1.29
DEG1YFL001W ITT1Q04638 464 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms