RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B MSB4Q12317 492 aa18.47■□□□□ 0.55
YER088W-BYER088W-B CTF4Q01454 927 aa18.46■□□□□ 0.55
YER088W-BYER088W-B NUP145P49687 1317 aa18.44■□□□□ 0.54
YER088W-BYER088W-B RIM15P43565 1770 aa18.43■□□□□ 0.54
YER088W-BYER088W-B RRP46P53256 223 aaPredicted RBP18.42■□□□□ 0.54
YER088W-BYER088W-B GRX1P25373 110 aaKnown RBP18.4■□□□□ 0.54
YER088W-BYER088W-B SPT7P35177 1332 aa18.4■□□□□ 0.54
YER088W-BYER088W-B BDF1P35817 686 aa18.39■□□□□ 0.53
YER088W-BYER088W-B YBP2P53169 641 aa18.39■□□□□ 0.53
YER088W-BYER088W-B AOS1Q06624 347 aa18.38■□□□□ 0.53
YER088W-BYER088W-B GRE2Q12068 342 aaKnown RBP18.37■□□□□ 0.53
YER088W-BYER088W-B NTH2P35172 780 aa18.35■□□□□ 0.53
YER088W-BYER088W-B RAD4P14736 754 aa18.34■□□□□ 0.53
YER088W-BYER088W-B RPG1P38249 964 aaKnown RBP18.34■□□□□ 0.53
YER088W-BYER088W-B TUM1Q08686 304 aaKnown RBP18.34■□□□□ 0.53
YER088W-BYER088W-B ALD3P54114 506 aa18.32■□□□□ 0.52
YER088W-BYER088W-B BUG1Q12191 341 aa18.32■□□□□ 0.52
YER088W-BYER088W-B RTR1P40084 226 aaPredicted RBP18.29■□□□□ 0.52
YER088W-BYER088W-B IOC4Q04213 475 aa18.28■□□□□ 0.52
YER088W-BYER088W-B KCC4P25389 1037 aa18.27■□□□□ 0.52
YER088W-BYER088W-B PRD1P25375 712 aa18.24■□□□□ 0.51
YER088W-BYER088W-B UTP22P53254 1237 aaPredicted RBP18.24■□□□□ 0.51
YER088W-BYER088W-B RMT2Q03305 412 aa18.24■□□□□ 0.51
YER088W-BYER088W-B ALE1Q08548 619 aa18.24■□□□□ 0.51
YER088W-BYER088W-B TOS1P38288 455 aa18.21■□□□□ 0.51
YER088W-BYER088W-B YNL050CP53952 270 aa18.21■□□□□ 0.51
YER088W-BYER088W-B NOP53Q12080 455 aaKnown RBP18.18■□□□□ 0.5
YER088W-BYER088W-B UGA3P26370 528 aa18.17■□□□□ 0.5
YER088W-BYER088W-B NYV1Q12255 253 aa18.17■□□□□ 0.5
YER088W-BYER088W-B BUD27P43573 796 aaKnown RBP RIP-Chip data18.15■□□□□ 0.5not detected
YER088W-BYER088W-B HPC2Q01448 625 aa18.15■□□□□ 0.5
YER088W-BYER088W-B THI22Q06490 572 aa18.15■□□□□ 0.5
YER088W-BYER088W-B MPP10P47083 593 aaKnown RBP18.14■□□□□ 0.49
YER088W-BYER088W-B NSE3Q05541 303 aa18.14■□□□□ 0.49
YER088W-BYER088W-B TEA1P47988 759 aa18.13■□□□□ 0.49
YER088W-BYER088W-B ZDS1P50111 915 aaKnown RBP18.12■□□□□ 0.49
YER088W-BYER088W-B SAP155P43612 1002 aa18.11■□□□□ 0.49
YER088W-BYER088W-B RIX7Q07844 837 aaKnown RBP18.11■□□□□ 0.49
YER088W-BYER088W-B MDG1P53885 366 aa18.1■□□□□ 0.49
YER088W-BYER088W-B YDL144CQ07589 356 aa18.1■□□□□ 0.49
YER088W-BYER088W-B PHM7Q12252 991 aa18.1■□□□□ 0.49
YER088W-BYER088W-B SSA1P10591 642 aaKnown RBP18.09■□□□□ 0.49
YER088W-BYER088W-B EAF6P47128 113 aa18.09■□□□□ 0.49
YER088W-BYER088W-B CTI6Q08923 506 aa18.08■□□□□ 0.48
YER088W-BYER088W-B MAM1P40065 302 aa18.07■□□□□ 0.48
YER088W-BYER088W-B RTT109Q07794 436 aa18.07■□□□□ 0.48
YER088W-BYER088W-B SER1P33330 395 aaKnown RBP18.06■□□□□ 0.48
YER088W-BYER088W-B SSP2Q08646 371 aa18.06■□□□□ 0.48
YER088W-BYER088W-B COQ4O13525 335 aa18.04■□□□□ 0.48
YER088W-BYER088W-B RRT14P40470 206 aa18.04■□□□□ 0.48
YER088W-BYER088W-B YFR016CP43597 1233 aaKnown RBP18.04■□□□□ 0.48
YER088W-BYER088W-B MSN5P52918 1224 aa18.04■□□□□ 0.48
YER088W-BYER088W-B BMS1Q08965 1183 aaKnown RBP18.04■□□□□ 0.48
YER088W-BYER088W-B YBR287WP38355 427 aa18.03■□□□□ 0.48
YER088W-BYER088W-B YGL082WP53155 381 aa18.02■□□□□ 0.48
YER088W-BYER088W-B LYS2P07702 1392 aa18.02■□□□□ 0.47
YER088W-BYER088W-B TPD3P31383 635 aa18.01■□□□□ 0.47
YER088W-BYER088W-B GYP7P48365 746 aa18■□□□□ 0.47
YER088W-BYER088W-B HEF3P53978 1044 aaKnown RBP18■□□□□ 0.47
YER088W-BYER088W-B LPD1P09624 499 aaKnown RBP17.99■□□□□ 0.47
YER088W-BYER088W-B ARG8P18544 423 aa17.98■□□□□ 0.47
YER088W-BYER088W-B ZDS2P54786 942 aa17.98■□□□□ 0.47
YER088W-BYER088W-B UTP10P42945 1769 aaKnown RBP17.96■□□□□ 0.47
YER088W-BYER088W-B DCD1P06773 312 aa17.96■□□□□ 0.47
YER088W-BYER088W-B APL2P36000 726 aaPredicted RBP17.96■□□□□ 0.47
YER088W-BYER088W-B CTT1P06115 562 aa17.95■□□□□ 0.46
YER088W-BYER088W-B ERT1P38140 529 aa17.95■□□□□ 0.46
YER088W-BYER088W-B YPR204WQ08995 1032 aa17.95■□□□□ 0.46
YER088W-BYER088W-B YKL222CP35995 705 aa17.94■□□□□ 0.46
YER088W-BYER088W-B CWH41P53008 833 aa17.93■□□□□ 0.46
YER088W-BYER088W-B RAT1Q02792 1006 aaKnown RBP17.93■□□□□ 0.46
YER088W-BYER088W-B YOL057WQ08225 711 aa17.93■□□□□ 0.46
YER088W-BYER088W-B VPS64Q03944 604 aa17.92■□□□□ 0.46
YER088W-BYER088W-B KIN4Q01919 800 aa17.91■□□□□ 0.46
YER088W-BYER088W-B RPP0P05317 312 aaKnown RBP17.9■□□□□ 0.46
YER088W-BYER088W-B SUI2P20459 304 aaKnown RBP17.89■□□□□ 0.45
YER088W-BYER088W-B YER156CP40093 338 aaKnown RBP17.89■□□□□ 0.45
YER088W-BYER088W-B PFF1P38244 976 aa17.88■□□□□ 0.45
YER088W-BYER088W-B SRT1Q03175 343 aa17.88■□□□□ 0.45
YER088W-BYER088W-B SMY1P32364 656 aaKnown RBP17.85■□□□□ 0.45
YER088W-BYER088W-B BDF2Q07442 638 aa17.85■□□□□ 0.45
YER088W-BYER088W-B VPS27P40343 622 aaKnown RBP17.84■□□□□ 0.45
YER088W-BYER088W-B DIB1Q06819 143 aaPredicted RBP17.83■□□□□ 0.44
YER088W-BYER088W-B DNM1P54861 757 aa17.82■□□□□ 0.44
YER088W-BYER088W-B YLR271WQ06152 274 aa17.81■□□□□ 0.44
YER088W-BYER088W-B IRC3Q06683 689 aa17.81■□□□□ 0.44
YER088W-BYER088W-B YDR306CQ06640 478 aa17.8■□□□□ 0.44
YER088W-BYER088W-B HAT1Q12341 374 aa17.8■□□□□ 0.44
YER088W-BYER088W-B SWI1P09547 1314 aa17.79■□□□□ 0.44
YER088W-BYER088W-B CAF20P12962 161 aaKnown RBP17.79■□□□□ 0.44
YER088W-BYER088W-B ERO1Q03103 563 aa17.78■□□□□ 0.44
YER088W-BYER088W-B CST6P40535 587 aa17.77■□□□□ 0.44
YER088W-BYER088W-B PKH1Q03407 766 aa17.77■□□□□ 0.44
YER088W-BYER088W-B CDC45Q08032 650 aa17.77■□□□□ 0.44
YER088W-BYER088W-B SSK22P25390 1331 aaPredicted RBP17.76■□□□□ 0.43
YER088W-BYER088W-B MRP7P12687 371 aa17.76■□□□□ 0.43
YER088W-BYER088W-B SIT4P20604 311 aa17.75■□□□□ 0.43
YER088W-BYER088W-B NUP133P36161 1157 aa17.74■□□□□ 0.43
YER088W-BYER088W-B YJR008WP47085 338 aa17.74■□□□□ 0.43
YER088W-BYER088W-B SQS1P53866 767 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms