RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W TFB3Q03290 321 aa6.11□□□□□ -1.43
VMA8YEL051W MAK16P10962 306 aaPredicted RBP6.1□□□□□ -1.43
VMA8YEL051W FIG4P42837 879 aa6.1□□□□□ -1.43
VMA8YEL051W YDR444WQ04093 687 aa6.1□□□□□ -1.43
VMA8YEL051W CSE4P36012 229 aa6.09□□□□□ -1.43
VMA8YEL051W PKC1P24583 1151 aa6.08□□□□□ -1.44
VMA8YEL051W MRT4P33201 236 aaKnown RBP6.08□□□□□ -1.44
VMA8YEL051W YBL036CP38197 257 aa6.07□□□□□ -1.44
VMA8YEL051W ITT1Q04638 464 aa6.07□□□□□ -1.44
VMA8YEL051W TEC1P18412 486 aa6.06□□□□□ -1.44
VMA8YEL051W LCB5Q06147 687 aaKnown RBP6.06□□□□□ -1.44
VMA8YEL051W NAF1P53919 492 aaKnown RBP6.05□□□□□ -1.44
VMA8YEL051W UGA3P26370 528 aa6.04□□□□□ -1.44
VMA8YEL051W YJR115WP47152 169 aa6.04□□□□□ -1.44
VMA8YEL051W MSB3P48566 633 aaPredicted RBP6.04□□□□□ -1.44
VMA8YEL051W APP1P53933 587 aa6.04□□□□□ -1.44
VMA8YEL051W YPR084WQ06821 456 aa6.04□□□□□ -1.44
VMA8YEL051W EMW1P42842 904 aaKnown RBP6.03□□□□□ -1.44
VMA8YEL051W GUT2P32191 649 aa6.02□□□□□ -1.45
VMA8YEL051W RTT106P40161 455 aa6.02□□□□□ -1.45
VMA8YEL051W SPT5P27692 1063 aaKnown RBP6.01□□□□□ -1.45
VMA8YEL051W YDJ1P25491 409 aaKnown RBP6□□□□□ -1.45
VMA8YEL051W YBL086CP38177 466 aa6□□□□□ -1.45
VMA8YEL051W HGH1P48362 394 aaKnown RBP6□□□□□ -1.45
VMA8YEL051W PTK2P47116 818 aaKnown RBP5.99□□□□□ -1.45
VMA8YEL051W STE20Q03497 939 aaKnown RBP5.99□□□□□ -1.45
VMA8YEL051W FRA1Q07825 749 aa5.99□□□□□ -1.45
VMA8YEL051W SRF1Q12516 437 aa5.98□□□□□ -1.45
VMA8YEL051W BIO2P32451 375 aa5.97□□□□□ -1.45
VMA8YEL051W YJL007CP47080 104 aa5.97□□□□□ -1.45
VMA8YEL051W SUP45P12385 437 aaKnown RBP5.96□□□□□ -1.46
VMA8YEL051W MKS1P34072 584 aa5.96□□□□□ -1.46
VMA8YEL051W EMP47P43555 445 aa5.96□□□□□ -1.46
VMA8YEL051W YNL108CP53929 270 aa5.96□□□□□ -1.46
VMA8YEL051W MCM16Q12262 181 aa5.96□□□□□ -1.46
VMA8YEL051W ISF1P32488 338 aa5.95□□□□□ -1.46
VMA8YEL051W MRX12P47084 519 aa5.95□□□□□ -1.46
VMA8YEL051W NUP85P46673 744 aa5.94□□□□□ -1.46
VMA8YEL051W DFG5Q05031 458 aa5.94□□□□□ -1.46
VMA8YEL051W ATG20Q07528 640 aa5.94□□□□□ -1.46
VMA8YEL051W ARG82P07250 355 aa5.93□□□□□ -1.46
VMA8YEL051W FBP26P32604 452 aa5.93□□□□□ -1.46
VMA8YEL051W BIM1P40013 344 aa5.93□□□□□ -1.46
VMA8YEL051W AAD14P42884 376 aa5.93□□□□□ -1.46
VMA8YEL051W DMA2P53924 522 aa5.93□□□□□ -1.46
VMA8YEL051W ENO2P00925 437 aaKnown RBP5.92□□□□□ -1.46
VMA8YEL051W YPP1P46951 817 aa5.92□□□□□ -1.46
VMA8YEL051W MTC5Q03897 1148 aa5.92□□□□□ -1.46
VMA8YEL051W STE6P12866 1290 aa5.91□□□□□ -1.46
VMA8YEL051W APL6P46682 809 aa5.91□□□□□ -1.46
VMA8YEL051W ISU1Q03020 165 aa5.91□□□□□ -1.46
VMA8YEL051W YLR346CQ06139 101 aa5.91□□□□□ -1.46
VMA8YEL051W OPT2Q06593 877 aa5.91□□□□□ -1.46
VMA8YEL051W BDS1Q08347 646 aa5.91□□□□□ -1.46
VMA8YEL051W ATG32P40458 529 aa5.9□□□□□ -1.46
VMA8YEL051W TIF1P10081 395 aaKnown RBP5.88□□□□□ -1.47
VMA8YEL051W DLD1P32891 587 aa5.88□□□□□ -1.47
VMA8YEL051W LSC2P53312 427 aa5.88□□□□□ -1.47
VMA8YEL051W ISR1Q06098 443 aaKnown RBP5.88□□□□□ -1.47
VMA8YEL051W ATG3P40344 310 aa5.87□□□□□ -1.47
VMA8YEL051W RIM21P48565 533 aa5.87□□□□□ -1.47
VMA8YEL051W MIP1P15801 1254 aa5.86□□□□□ -1.47
VMA8YEL051W RTG2P32608 588 aaKnown RBP5.86□□□□□ -1.47
VMA8YEL051W GLY1P37303 387 aaKnown RBP5.86□□□□□ -1.47
VMA8YEL051W SOH1P38633 127 aa5.86□□□□□ -1.47
VMA8YEL051W ACO2P39533 789 aa5.86□□□□□ -1.47
VMA8YEL051W RPL34BP40525 121 aaKnown RBP5.86□□□□□ -1.47
VMA8YEL051W YJR098CP47139 656 aa5.86□□□□□ -1.47
VMA8YEL051W CAF120P53836 1060 aa5.86□□□□□ -1.47
VMA8YEL051W RPP2BP02400 110 aaKnown RBP5.85□□□□□ -1.47
VMA8YEL051W HAL5P38970 855 aaKnown RBP5.85□□□□□ -1.47
VMA8YEL051W UBP2Q01476 1272 aa5.85□□□□□ -1.47
VMA8YEL051W MRX10Q05648 414 aa5.85□□□□□ -1.47
VMA8YEL051W UTP13Q05946 817 aaKnown RBP5.85□□□□□ -1.47
VMA8YEL051W SPT2P06843 333 aaPredicted RBP5.84□□□□□ -1.47
VMA8YEL051W TCB1Q12466 1186 aa5.84□□□□□ -1.47
VMA8YEL051W ENO1P00924 437 aaKnown RBP5.83□□□□□ -1.48
VMA8YEL051W RDS2P19541 446 aaKnown RBP5.83□□□□□ -1.48
VMA8YEL051W SCW11P53189 542 aa5.83□□□□□ -1.48
VMA8YEL051W TY1A-BLQ12266 440 aa5.83□□□□□ -1.48
VMA8YEL051W DAT1P13483 248 aaKnown RBP5.82□□□□□ -1.48
VMA8YEL051W DLD3P39976 496 aaKnown RBP5.82□□□□□ -1.48
VMA8YEL051W WTM2Q12206 467 aa5.82□□□□□ -1.48
VMA8YEL051W UTR2P32623 467 aa5.81□□□□□ -1.48
VMA8YEL051W HDA3Q06623 655 aa5.81□□□□□ -1.48
VMA8YEL051W TRK2P28584 889 aa5.8□□□□□ -1.48
VMA8YEL051W YPR204WQ08995 1032 aa5.8□□□□□ -1.48
VMA8YEL051W TBS1P38114 1094 aa5.79□□□□□ -1.48
VMA8YEL051W OSH7P38755 437 aa5.79□□□□□ -1.48
VMA8YEL051W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
VMA8YEL051W PEP12P32854 288 aa5.77□□□□□ -1.49
VMA8YEL051W SLX8P40072 274 aa5.77□□□□□ -1.49
VMA8YEL051W YIR007WP40566 764 aa5.77□□□□□ -1.49
VMA8YEL051W VTC4P47075 721 aa5.77□□□□□ -1.49
VMA8YEL051W DAL1P32375 460 aa5.76□□□□□ -1.49
VMA8YEL051W SSN3P39073 555 aa5.75□□□□□ -1.49
VMA8YEL051W UTP7P40055 554 aaKnown RBP5.75□□□□□ -1.49
VMA8YEL051W YGR035CP53222 116 aa5.75□□□□□ -1.49
VMA8YEL051W CDC19P00549 500 aaKnown RBP5.74□□□□□ -1.49
VMA8YEL051W AIM9P40053 627 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms