RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C ASH1P34233 588 aa8.66□□□□□ -1.02
TCA17YEL048C GCR2Q01722 534 aa8.66□□□□□ -1.02
TCA17YEL048C GUT2P32191 649 aa8.65□□□□□ -1.02
TCA17YEL048C AFT1P22149 690 aa8.64□□□□□ -1.03
TCA17YEL048C BRE2P43132 505 aa8.63□□□□□ -1.03
TCA17YEL048C BIO2P32451 375 aa8.62□□□□□ -1.03
TCA17YEL048C STE20Q03497 939 aaKnown RBP8.62□□□□□ -1.03
TCA17YEL048C YDJ1P25491 409 aaKnown RBP8.61□□□□□ -1.03
TCA17YEL048C MRT4P33201 236 aaKnown RBP8.61□□□□□ -1.03
TCA17YEL048C YNL108CP53929 270 aa8.61□□□□□ -1.03
TCA17YEL048C UGA3P26370 528 aa8.6□□□□□ -1.03
TCA17YEL048C ITT1Q04638 464 aa8.6□□□□□ -1.03
TCA17YEL048C APP1P53933 587 aa8.59□□□□□ -1.03
TCA17YEL048C YPR084WQ06821 456 aa8.59□□□□□ -1.03
TCA17YEL048C BIM1P40013 344 aa8.58□□□□□ -1.04
TCA17YEL048C RTT106P40161 455 aa8.58□□□□□ -1.04
TCA17YEL048C RPL34BP40525 121 aaKnown RBP8.58□□□□□ -1.04
TCA17YEL048C YPP1P46951 817 aa8.58□□□□□ -1.04
TCA17YEL048C MSB3P48566 633 aaPredicted RBP8.58□□□□□ -1.04
TCA17YEL048C MCM16Q12262 181 aa8.58□□□□□ -1.04
TCA17YEL048C EMW1P42842 904 aaKnown RBP8.57□□□□□ -1.04
TCA17YEL048C EMP47P43555 445 aa8.57□□□□□ -1.04
TCA17YEL048C FRA1Q07825 749 aa8.57□□□□□ -1.04
TCA17YEL048C MRX12P47084 519 aa8.56□□□□□ -1.04
TCA17YEL048C SUP45P12385 437 aaKnown RBP8.55□□□□□ -1.04
TCA17YEL048C ISF1P32488 338 aa8.55□□□□□ -1.04
TCA17YEL048C ATG32P40458 529 aa8.54□□□□□ -1.04
TCA17YEL048C SRF1Q12516 437 aa8.54□□□□□ -1.04
TCA17YEL048C YJR115WP47152 169 aa8.53□□□□□ -1.04
TCA17YEL048C ENO2P00925 437 aaKnown RBP8.52□□□□□ -1.05
TCA17YEL048C TIF1P10081 395 aaKnown RBP8.52□□□□□ -1.05
TCA17YEL048C MKS1P34072 584 aa8.52□□□□□ -1.05
TCA17YEL048C YBL086CP38177 466 aa8.52□□□□□ -1.05
TCA17YEL048C RTG2P32608 588 aaKnown RBP8.5□□□□□ -1.05
TCA17YEL048C ATG3P40344 310 aa8.5□□□□□ -1.05
TCA17YEL048C ATG20Q07528 640 aa8.5□□□□□ -1.05
TCA17YEL048C PTK2P47116 818 aaKnown RBP8.48□□□□□ -1.05
TCA17YEL048C ARG82P07250 355 aa8.47□□□□□ -1.05
TCA17YEL048C FBP26P32604 452 aa8.47□□□□□ -1.05
TCA17YEL048C ENV9Q08651 330 aa8.47□□□□□ -1.05
TCA17YEL048C RIM21P48565 533 aa8.46□□□□□ -1.06
TCA17YEL048C DFG5Q05031 458 aa8.46□□□□□ -1.06
TCA17YEL048C BDS1Q08347 646 aa8.46□□□□□ -1.06
TCA17YEL048C ISR1Q06098 443 aaKnown RBP8.45□□□□□ -1.06
TCA17YEL048C YPR204WQ08995 1032 aa8.44□□□□□ -1.06
TCA17YEL048C RPP2BP02400 110 aaKnown RBP8.43□□□□□ -1.06
TCA17YEL048C SOH1P38633 127 aa8.43□□□□□ -1.06
TCA17YEL048C APL6P46682 809 aa8.43□□□□□ -1.06
TCA17YEL048C ISU1Q03020 165 aa8.43□□□□□ -1.06
TCA17YEL048C AAD14P42884 376 aa8.42□□□□□ -1.06
TCA17YEL048C UTP13Q05946 817 aaKnown RBP8.42□□□□□ -1.06
TCA17YEL048C ENO1P00924 437 aaKnown RBP8.41□□□□□ -1.06
TCA17YEL048C MET22P32179 357 aa8.41□□□□□ -1.06
TCA17YEL048C NUP85P46673 744 aa8.41□□□□□ -1.06
TCA17YEL048C STE6P12866 1290 aa8.4□□□□□ -1.06
TCA17YEL048C YLR346CQ06139 101 aa8.4□□□□□ -1.06
TCA17YEL048C YDR444WQ04093 687 aa8.39□□□□□ -1.07
TCA17YEL048C MRX10Q05648 414 aa8.39□□□□□ -1.07
TCA17YEL048C GAR1P28007 205 aaKnown RBP8.38□□□□□ -1.07
TCA17YEL048C GBP2P25555 427 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
TCA17YEL048C DLD3P39976 496 aaKnown RBP8.37□□□□□ -1.07
TCA17YEL048C LSC2P53312 427 aa8.37□□□□□ -1.07
TCA17YEL048C DAT1P13483 248 aaKnown RBP8.36□□□□□ -1.07
TCA17YEL048C RDS2P19541 446 aaKnown RBP8.36□□□□□ -1.07
TCA17YEL048C UTR2P32623 467 aa8.36□□□□□ -1.07
TCA17YEL048C HAL5P38970 855 aaKnown RBP8.35□□□□□ -1.07
TCA17YEL048C LCB5Q06147 687 aaKnown RBP8.35□□□□□ -1.07
TCA17YEL048C SIS2P36024 562 aa8.34□□□□□ -1.07
TCA17YEL048C TBS1P38114 1094 aa8.34□□□□□ -1.07
TCA17YEL048C DLD1P32891 587 aa8.33□□□□□ -1.08
TCA17YEL048C OPT2Q06593 877 aa8.33□□□□□ -1.08
TCA17YEL048C SPT2P06843 333 aaPredicted RBP8.32□□□□□ -1.08
TCA17YEL048C MIP1P15801 1254 aa8.32□□□□□ -1.08
TCA17YEL048C HDA3Q06623 655 aa8.32□□□□□ -1.08
TCA17YEL048C UBP2Q01476 1272 aa8.31□□□□□ -1.08
TCA17YEL048C WTM2Q12206 467 aa8.31□□□□□ -1.08
TCA17YEL048C YJR098CP47139 656 aa8.3□□□□□ -1.08
TCA17YEL048C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
TCA17YEL048C YFL034WP43564 1073 aa8.29□□□□□ -1.08
TCA17YEL048C PEP12P32854 288 aa8.28□□□□□ -1.08
TCA17YEL048C GLY1P37303 387 aaKnown RBP8.28□□□□□ -1.08
TCA17YEL048C KTR7P40504 517 aa8.28□□□□□ -1.08
TCA17YEL048C SCW11P53189 542 aa8.28□□□□□ -1.08
TCA17YEL048C TCB1Q12466 1186 aa8.28□□□□□ -1.08
TCA17YEL048C RLF2Q12495 606 aa8.28□□□□□ -1.08
TCA17YEL048C AIM9P40053 627 aaKnown RBP8.26□□□□□ -1.09
TCA17YEL048C TTI1P36097 1038 aa8.25□□□□□ -1.09
TCA17YEL048C SLX8P40072 274 aa8.25□□□□□ -1.09
TCA17YEL048C PDI1P17967 522 aaKnown RBP8.23□□□□□ -1.09
TCA17YEL048C UTP7P40055 554 aaKnown RBP8.23□□□□□ -1.09
TCA17YEL048C TSC13Q99190 310 aa8.23□□□□□ -1.09
TCA17YEL048C CPS1P27614 576 aa8.22□□□□□ -1.09
TCA17YEL048C TY1A-BLQ12266 440 aa8.22□□□□□ -1.09
TCA17YEL048C PHO87P25360 923 aa8.21□□□□□ -1.1
TCA17YEL048C ALA1P40825 983 aaKnown RBP8.21□□□□□ -1.1
TCA17YEL048C SWI5P08153 709 aa8.2□□□□□ -1.1
TCA17YEL048C HAP4P14064 554 aa8.2□□□□□ -1.1
TCA17YEL048C SUM1P46676 1062 aa8.2□□□□□ -1.1
TCA17YEL048C RPS6AP0CX37 236 aaKnown RBP8.19□□□□□ -1.1
TCA17YEL048C RPS6BP0CX38 236 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms