RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W TY1A-BRQ12217 440 aa7.87□□□□□ -1.15
VHS1YDR247W HAT1Q12341 374 aa7.87□□□□□ -1.15
VHS1YDR247W TY1A-NL2Q12470 440 aa7.87□□□□□ -1.15
VHS1YDR247W TY1A-GR2Q12485 440 aa7.87□□□□□ -1.15
VHS1YDR247W MRX12P47084 519 aa7.86□□□□□ -1.15
VHS1YDR247W BNI4P53858 892 aa7.86□□□□□ -1.15
VHS1YDR247W YPR097WQ06839 1073 aa7.86□□□□□ -1.15
VHS1YDR247W SEC2P17065 759 aa7.85□□□□□ -1.15
VHS1YDR247W GUT2P32191 649 aa7.85□□□□□ -1.15
VHS1YDR247W ATG3P40344 310 aa7.85□□□□□ -1.15
VHS1YDR247W STE20Q03497 939 aaKnown RBP7.85□□□□□ -1.15
VHS1YDR247W BUD20Q08004 166 aaPredicted RBP7.85□□□□□ -1.15
VHS1YDR247W GAL2P13181 574 aa7.84□□□□□ -1.15
VHS1YDR247W HIR3P47171 1648 aa7.84□□□□□ -1.16
VHS1YDR247W FIG4P42837 879 aa7.84□□□□□ -1.16
VHS1YDR247W ELP4Q02884 456 aaKnown RBP7.84□□□□□ -1.16
VHS1YDR247W FRA1Q07825 749 aa7.84□□□□□ -1.16
VHS1YDR247W UBX7P38349 436 aa7.83□□□□□ -1.16
VHS1YDR247W XRN1P22147 1528 aaKnown RBP7.82□□□□□ -1.16
VHS1YDR247W PAC1P39946 494 aaKnown RBP7.82□□□□□ -1.16
VHS1YDR247W KXD1P53158 218 aa7.82□□□□□ -1.16
VHS1YDR247W YDR344CQ05510 147 aa7.82□□□□□ -1.16
VHS1YDR247W PDC1P06169 563 aaKnown RBP7.81□□□□□ -1.16
VHS1YDR247W PAT1P25644 796 aaKnown RBP7.81□□□□□ -1.16
VHS1YDR247W SPT23P35210 1082 aa7.81□□□□□ -1.16
VHS1YDR247W PRT1P06103 763 aaKnown RBP7.8□□□□□ -1.16
VHS1YDR247W PTC2P39966 464 aaKnown RBP7.8□□□□□ -1.16
VHS1YDR247W YPR084WQ06821 456 aa7.8□□□□□ -1.16
VHS1YDR247W RRN7P40992 514 aa7.79□□□□□ -1.16
VHS1YDR247W SEN54Q02825 467 aaPredicted RBP7.79□□□□□ -1.16
VHS1YDR247W UTP13Q05946 817 aaKnown RBP7.79□□□□□ -1.16
VHS1YDR247W PHO87P25360 923 aa7.78□□□□□ -1.16
VHS1YDR247W HEM3P28789 327 aa7.78□□□□□ -1.16
VHS1YDR247W BCK2P33306 851 aa7.78□□□□□ -1.16
VHS1YDR247W YEL077CQ3E7X8 1277 aa7.78□□□□□ -1.16
VHS1YDR247W SOH1P38633 127 aa7.77□□□□□ -1.17
VHS1YDR247W HAP4P14064 554 aa7.76□□□□□ -1.17
VHS1YDR247W STM1P39015 273 aaKnown RBP7.76□□□□□ -1.17
VHS1YDR247W HXT10P43581 546 aa7.76□□□□□ -1.17
VHS1YDR247W APL6P46682 809 aa7.76□□□□□ -1.17
VHS1YDR247W PUF6Q04373 656 aaKnown RBP7.75□□□□□ -1.17
VHS1YDR247W YPR015CQ12531 247 aa7.75□□□□□ -1.17
VHS1YDR247W YBL113CQ7M4S9 792 aa7.75□□□□□ -1.17
VHS1YDR247W REV3P14284 1504 aa7.74□□□□□ -1.17
VHS1YDR247W CHD1P32657 1468 aa7.74□□□□□ -1.17
VHS1YDR247W SNU71P53207 620 aaKnown RBP7.74□□□□□ -1.17
VHS1YDR247W NOP7P53261 605 aaKnown RBP7.74□□□□□ -1.17
VHS1YDR247W SPT16P32558 1035 aaKnown RBP7.73□□□□□ -1.17
VHS1YDR247W ACS2P52910 683 aaKnown RBP7.73□□□□□ -1.17
VHS1YDR247W YML082WQ04533 649 aaKnown RBP7.73□□□□□ -1.17
VHS1YDR247W THO2P53552 1597 aaKnown RBP7.73□□□□□ -1.17
VHS1YDR247W MMS22Q06164 1454 aa7.73□□□□□ -1.17
VHS1YDR247W VAC17P25591 423 aa7.72□□□□□ -1.17
VHS1YDR247W TPD3P31383 635 aa7.72□□□□□ -1.17
VHS1YDR247W CWC15Q03772 175 aaKnown RBP7.72□□□□□ -1.17
VHS1YDR247W KAR5Q04746 504 aa7.72□□□□□ -1.17
VHS1YDR247W RRD1P40454 393 aaKnown RBP7.71□□□□□ -1.17
VHS1YDR247W TSC13Q99190 310 aa7.71□□□□□ -1.17
VHS1YDR247W SIN3P22579 1536 aa7.71□□□□□ -1.18
VHS1YDR247W SEC20P28791 383 aa7.71□□□□□ -1.18
VHS1YDR247W TPS3P38426 1054 aaKnown RBP7.71□□□□□ -1.18
VHS1YDR247W ERP5P38819 212 aa7.71□□□□□ -1.18
VHS1YDR247W ROM1P53046 1155 aa7.71□□□□□ -1.18
VHS1YDR247W GAS4Q08271 471 aa7.71□□□□□ -1.18
VHS1YDR247W VRP1P37370 817 aa7.7□□□□□ -1.18
VHS1YDR247W SWR1Q05471 1514 aa7.69□□□□□ -1.18
VHS1YDR247W SSK2P53599 1579 aa7.68□□□□□ -1.18
VHS1YDR247W PDI1P17967 522 aaKnown RBP7.68□□□□□ -1.18
VHS1YDR247W RRN6P32786 894 aa7.68□□□□□ -1.18
VHS1YDR247W IXR1P33417 597 aa7.68□□□□□ -1.18
VHS1YDR247W IPL1P38991 367 aa7.68□□□□□ -1.18
VHS1YDR247W YFL034WP43564 1073 aa7.68□□□□□ -1.18
VHS1YDR247W ASF1P32447 279 aa7.67□□□□□ -1.18
VHS1YDR247W PNP1Q05788 311 aa7.67□□□□□ -1.18
VHS1YDR247W ISR1Q06098 443 aaKnown RBP7.67□□□□□ -1.18
VHS1YDR247W PUN1Q06991 263 aa7.67□□□□□ -1.18
VHS1YDR247W MON2P48563 1636 aaPredicted RBP7.67□□□□□ -1.18
VHS1YDR247W MOD5P07884 428 aa7.66□□□□□ -1.18
VHS1YDR247W SRS2P12954 1174 aa7.66□□□□□ -1.18
VHS1YDR247W VAN1P23642 535 aa7.66□□□□□ -1.18
VHS1YDR247W MSC6Q08818 692 aaKnown RBP7.66□□□□□ -1.18
VHS1YDR247W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
VHS1YDR247W MIP1P15801 1254 aa7.65□□□□□ -1.18
VHS1YDR247W GRS1P38088 690 aaKnown RBP7.65□□□□□ -1.18
VHS1YDR247W HAL5P38970 855 aaKnown RBP7.65□□□□□ -1.18
VHS1YDR247W XDJ1P39102 459 aa7.65□□□□□ -1.18
VHS1YDR247W SAS4Q04003 481 aa7.65□□□□□ -1.18
VHS1YDR247W GYP1Q08484 637 aa7.65□□□□□ -1.18
VHS1YDR247W TAF2P23255 1407 aa7.64□□□□□ -1.19
VHS1YDR247W TRL1P09880 827 aaKnown RBP7.64□□□□□ -1.19
VHS1YDR247W AIM9P40053 627 aaKnown RBP7.64□□□□□ -1.19
VHS1YDR247W ATG20Q07528 640 aa7.64□□□□□ -1.19
VHS1YDR247W TRS33Q99394 268 aa7.64□□□□□ -1.19
VHS1YDR247W YHL050CP38721 697 aa7.63□□□□□ -1.19
VHS1YDR247W YHR219WP38900 624 aa7.63□□□□□ -1.19
VHS1YDR247W ATG1P53104 897 aa7.63□□□□□ -1.19
VHS1YDR247W FUR4P05316 633 aaKnown RBP7.62□□□□□ -1.19
VHS1YDR247W MDJ2P42834 146 aa7.62□□□□□ -1.19
VHS1YDR247W HDA3Q06623 655 aa7.62□□□□□ -1.19
VHS1YDR247W AIM44Q99299 758 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms