RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	PIN2	Q12057	282 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	GRE2	Q12068	342 aa	Known RBP	4.04	□□□□□ -1.76
VBA4	YDR119W	SSF2	Q12153	453 aa	Predicted RBP	4.04	□□□□□ -1.76
VBA4	YDR119W	YOR131C	Q12486	218 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	MET4	P32389	672 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	RSC30	P38781	883 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	MNN1	P39106	762 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	BOL3	P39724	118 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	PNP1	Q05788	311 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	BRE1	Q07457	700 aa	Known RBP	4.03	□□□□□ -1.76
VBA4	YDR119W	FRT1	Q99332	602 aa		4.03	□□□□□ -1.76
VBA4	YDR119W	KAR1	P11927	433 aa		4.03	□□□□□ -1.77
VBA4	YDR119W	CLN2	P20438	545 aa		4.03	□□□□□ -1.77
VBA4	YDR119W	GRX7	P38068	203 aa		4.03	□□□□□ -1.77
VBA4	YDR119W	GLO3	P38682	493 aa	Known RBP	4.03	□□□□□ -1.77
VBA4	YDR119W	ACF4	P47129	309 aa		4.03	□□□□□ -1.77
VBA4	YDR119W	ECM16	Q04217	1267 aa	Known RBP	4.03	□□□□□ -1.77
VBA4	YDR119W	YOR238W	Q08634	303 aa		4.03	□□□□□ -1.77
VBA4	YDR119W	FUR4	P05316	633 aa	Known RBP	4.02	□□□□□ -1.77
VBA4	YDR119W	MET6	P05694	767 aa	Known RBP	4.02	□□□□□ -1.77
VBA4	YDR119W	QDR1	P40475	563 aa		4.02	□□□□□ -1.77
VBA4	YDR119W	AIM21	P40563	679 aa		4.02	□□□□□ -1.77
VBA4	YDR119W	YJR142W	P47173	342 aa		4.02	□□□□□ -1.77
VBA4	YDR119W	NAF1	P53919	492 aa	Known RBP	4.02	□□□□□ -1.77
VBA4	YDR119W	TMA64	Q04600	565 aa	Known RBP	4.02	□□□□□ -1.77
VBA4	YDR119W	ENV9	Q08651	330 aa		4.02	□□□□□ -1.77
VBA4	YDR119W	MCM16	Q12262	181 aa		4.02	□□□□□ -1.77
VBA4	YDR119W	RPA135	P22138	1203 aa	Known RBP	4.01	□□□□□ -1.77
VBA4	YDR119W	VMA4	P22203	233 aa	Known RBP	4.01	□□□□□ -1.77
VBA4	YDR119W	ERP2	P39704	215 aa		4.01	□□□□□ -1.77
VBA4	YDR119W	BOI2	P39969	1040 aa		4.01	□□□□□ -1.77
VBA4	YDR119W	UTP14	Q04500	899 aa	Known RBP	4.01	□□□□□ -1.77
VBA4	YDR119W	SIT4	P20604	311 aa		4.01	□□□□□ -1.77
VBA4	YDR119W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
VBA4	YDR119W	KRI1	P42846	591 aa	Known RBP	4.01	□□□□□ -1.77
VBA4	YDR119W	SPT2	P06843	333 aa	Predicted RBP	4	□□□□□ -1.77
VBA4	YDR119W	UBP12	P39538	1254 aa		4	□□□□□ -1.77
VBA4	YDR119W	MSH4	P40965	878 aa	Predicted RBP	4	□□□□□ -1.77
VBA4	YDR119W	YPR109W	Q06104	294 aa		4	□□□□□ -1.77
VBA4	YDR119W	BDF2	Q07442	638 aa		4	□□□□□ -1.77
VBA4	YDR119W	HAA1	Q12753	694 aa	Known RBP	4	□□□□□ -1.77
VBA4	YDR119W	SRS2	P12954	1174 aa		4	□□□□□ -1.77
VBA4	YDR119W	MIP1	P15801	1254 aa		4	□□□□□ -1.77
VBA4	YDR119W	MCM2	P29469	868 aa		4	□□□□□ -1.77
VBA4	YDR119W	SEC6	P32844	805 aa		4	□□□□□ -1.77
VBA4	YDR119W	EMP47	P43555	445 aa		4	□□□□□ -1.77
VBA4	YDR119W	RMD1	Q03441	430 aa		4	□□□□□ -1.77
VBA4	YDR119W	CEF1	Q03654	590 aa	Predicted RBP	4	□□□□□ -1.77
VBA4	YDR119W	SPR28	Q04921	423 aa		4	□□□□□ -1.77
VBA4	YDR119W	PHO87	P25360	923 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	YEN1	P40028	759 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	DNM1	P54861	757 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	PUN1	Q06991	263 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	HAP4	P14064	554 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	RTT106	P40161	455 aa		3.99	□□□□□ -1.77
VBA4	YDR119W	RPT2	P40327	437 aa	Known RBP	3.99	□□□□□ -1.77
VBA4	YDR119W	GIR2	Q03768	265 aa	Predicted RBP	3.99	□□□□□ -1.77
VBA4	YDR119W	GAP1	P19145	602 aa	Predicted RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	SLY41	P22215	453 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	PEP7	P32609	515 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	TOA1	P32773	286 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	RPT1	P33299	467 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	MPE1	P35728	441 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	SOL3	P38858	249 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	ESF1	Q06344	628 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	CSC1	Q06538	782 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	VMA1	P17255	1071 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	PWP2	P25635	923 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	ISF1	P32488	338 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	ENP1	P38333	483 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	NOC2	P39744	710 aa	Known RBP	3.98	□□□□□ -1.77
VBA4	YDR119W	NUP82	P40368	713 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	ROM1	P53046	1155 aa		3.98	□□□□□ -1.77
VBA4	YDR119W	RAD2	P07276	1031 aa		3.97	□□□□□ -1.77
VBA4	YDR119W	VPS24	P36095	224 aa	Known RBP	3.97	□□□□□ -1.77
VBA4	YDR119W	VPS27	P40343	622 aa	Known RBP	3.97	□□□□□ -1.77
VBA4	YDR119W	CWC24	P53769	259 aa		3.97	□□□□□ -1.77
VBA4	YDR119W	YOL036W	Q08206	761 aa		3.97	□□□□□ -1.77
VBA4	YDR119W	NKP1	Q12493	238 aa		3.97	□□□□□ -1.77
VBA4	YDR119W	MFT1	P33441	392 aa	Known RBP	3.96	□□□□□ -1.77
VBA4	YDR119W	ACS2	P52910	683 aa	Known RBP	3.96	□□□□□ -1.77
VBA4	YDR119W	MTO1	P53070	669 aa		3.96	□□□□□ -1.77
VBA4	YDR119W	HUL5	P53119	910 aa		3.96	□□□□□ -1.77
VBA4	YDR119W	ITC1	P53125	1264 aa		3.96	□□□□□ -1.77
VBA4	YDR119W	FUI1	P38196	639 aa		3.96	□□□□□ -1.78
VBA4	YDR119W	COG4	Q06096	861 aa		3.96	□□□□□ -1.78
VBA4	YDR119W	PHO4	P07270	312 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	TRX2	P22803	104 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	DPB3	P27344	201 aa		3.95	□□□□□ -1.78
VBA4	YDR119W	BOI1	P38041	980 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	ISW1	P38144	1129 aa		3.95	□□□□□ -1.78
VBA4	YDR119W	CRP1	P38845	465 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	HIF1	Q12373	385 aa		3.95	□□□□□ -1.78
VBA4	YDR119W	THS1	P04801	734 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	RPP1B	P10622	106 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	PHO8	P11491	566 aa		3.95	□□□□□ -1.78
VBA4	YDR119W	TRM1	P15565	570 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	SRM1	P21827	482 aa		3.95	□□□□□ -1.78
VBA4	YDR119W	GRX1	P25373	110 aa	Known RBP	3.95	□□□□□ -1.78
VBA4	YDR119W	MRC1	P25588	1096 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms