RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W NSR1P27476 414 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
TRM3YDL112W PDR10P51533 1564 aa2.86□□□□□ -1.95
TRM3YDL112W ARO1P08566 1588 aaKnown RBP2.86□□□□□ -1.95
TRM3YDL112W YNL108CP53929 270 aa2.86□□□□□ -1.95
TRM3YDL112W YDL129WQ07555 291 aa2.86□□□□□ -1.95
TRM3YDL112W DNF3Q12674 1656 aa2.85□□□□□ -1.95
TRM3YDL112W DPL1Q05567 589 aa2.85□□□□□ -1.95
TRM3YDL112W MST1P07236 462 aa2.85□□□□□ -1.95
TRM3YDL112W ERG12P07277 443 aa2.85□□□□□ -1.95
TRM3YDL112W ABP1P15891 592 aaKnown RBP2.85□□□□□ -1.95
TRM3YDL112W MMP1Q12372 583 aa2.85□□□□□ -1.95
TRM3YDL112W MPH3P0CE00 602 aa2.85□□□□□ -1.95
TRM3YDL112W NUD1P32336 851 aa2.85□□□□□ -1.95
TRM3YDL112W NIS1P53939 407 aa2.85□□□□□ -1.95
TRM3YDL112W PDR15Q04182 1529 aaKnown RBP2.85□□□□□ -1.95
TRM3YDL112W JIP4Q03361 876 aa2.84□□□□□ -1.95
TRM3YDL112W ERF2Q06551 359 aa2.84□□□□□ -1.95
TRM3YDL112W TY3B-GQ99315 1547 aa2.84□□□□□ -1.95
TRM3YDL112W SEC7P11075 2009 aaKnown RBP2.84□□□□□ -1.95
TRM3YDL112W MET10P39692 1035 aa2.84□□□□□ -1.95
TRM3YDL112W FPK1P53739 893 aa2.84□□□□□ -1.95
TRM3YDL112W RGR1P19263 1082 aa2.84□□□□□ -1.95
TRM3YDL112W MVP1P40959 511 aaKnown RBP2.84□□□□□ -1.95
TRM3YDL112W GLN1P32288 370 aaKnown RBP2.84□□□□□ -1.96
TRM3YDL112W AI4P03878 556 aa2.83□□□□□ -1.96
TRM3YDL112W ORC6P38826 435 aa2.83□□□□□ -1.96
TRM3YDL112W CAT8P39113 1433 aa2.82□□□□□ -1.96
TRM3YDL112W BUD31P25337 157 aaPredicted RBP2.82□□□□□ -1.96
TRM3YDL112W GYP1Q08484 637 aa2.82□□□□□ -1.96
TRM3YDL112W BMT6Q12291 365 aa2.82□□□□□ -1.96
TRM3YDL112W RRN7P40992 514 aa2.82□□□□□ -1.96
TRM3YDL112W IOC2Q12072 812 aa2.82□□□□□ -1.96
TRM3YDL112W NOP53Q12080 455 aaKnown RBP2.82□□□□□ -1.96
TRM3YDL112W YBT1P32386 1661 aa2.82□□□□□ -1.96
TRM3YDL112W ISF1P32488 338 aa2.82□□□□□ -1.96
TRM3YDL112W CSC1Q06538 782 aa2.82□□□□□ -1.96
TRM3YDL112W BIM1P40013 344 aa2.81□□□□□ -1.96
TRM3YDL112W PTC2P39966 464 aaKnown RBP2.81□□□□□ -1.96
TRM3YDL112W ISM1P48526 1002 aa2.81□□□□□ -1.96
TRM3YDL112W KTR1P27810 393 aaKnown RBP2.81□□□□□ -1.96
TRM3YDL112W ATG32P40458 529 aa2.81□□□□□ -1.96
TRM3YDL112W FRK1Q03002 865 aaPredicted RBP2.81□□□□□ -1.96
TRM3YDL112W SSA2P10592 639 aaKnown RBP2.8□□□□□ -1.96
TRM3YDL112W HAP5Q02516 242 aa2.8□□□□□ -1.96
TRM3YDL112W ISU2Q12056 156 aa2.8□□□□□ -1.96
TRM3YDL112W RAD59Q12223 238 aa2.8□□□□□ -1.96
TRM3YDL112W TY1B-NL2Q99337 1749 aaKnown RBP2.8□□□□□ -1.96
TRM3YDL112W CPS1P27614 576 aa2.8□□□□□ -1.96
TRM3YDL112W PSE1P32337 1089 aaKnown RBP2.8□□□□□ -1.96
TRM3YDL112W NUP157P40064 1391 aaKnown RBP2.8□□□□□ -1.96
TRM3YDL112W YDL206WQ12424 762 aa2.79□□□□□ -1.96
TRM3YDL112W RTG2P32608 588 aaKnown RBP2.79□□□□□ -1.96
TRM3YDL112W AIM7Q12156 149 aa2.79□□□□□ -1.96
TRM3YDL112W TRM1P15565 570 aaKnown RBP2.78□□□□□ -1.96
TRM3YDL112W YDJ1P25491 409 aaKnown RBP2.78□□□□□ -1.96
TRM3YDL112W SEC61P32915 480 aa2.78□□□□□ -1.96
TRM3YDL112W SPT16P32558 1035 aaKnown RBP2.77□□□□□ -1.97
TRM3YDL112W PUS5Q06244 254 aa2.77□□□□□ -1.97
TRM3YDL112W TFB4Q12004 338 aa2.77□□□□□ -1.97
TRM3YDL112W FKH1P40466 484 aa2.77□□□□□ -1.97
TRM3YDL112W ENV9Q08651 330 aa2.77□□□□□ -1.97
TRM3YDL112W KIP2P28743 706 aa2.77□□□□□ -1.97
TRM3YDL112W CLB5P30283 435 aa2.77□□□□□ -1.97
TRM3YDL112W STR2P47164 639 aa2.76□□□□□ -1.97
TRM3YDL112W BIO2P32451 375 aa2.76□□□□□ -1.97
TRM3YDL112W PAT1P25644 796 aaKnown RBP2.75□□□□□ -1.97
TRM3YDL112W NST1P53935 1240 aa2.75□□□□□ -1.97
TRM3YDL112W NUP188P52593 1655 aaKnown RBP2.75□□□□□ -1.97
TRM3YDL112W YSP2Q06681 1438 aa2.75□□□□□ -1.97
TRM3YDL112W VRP1P37370 817 aa2.75□□□□□ -1.97
TRM3YDL112W AIR2Q12476 344 aaKnown RBP2.75□□□□□ -1.97
TRM3YDL112W RAM1P22007 431 aa2.74□□□□□ -1.97
TRM3YDL112W RTT106P40161 455 aa2.74□□□□□ -1.97
TRM3YDL112W TUB4P53378 473 aa2.74□□□□□ -1.97
TRM3YDL112W VMR1P38735 1592 aa2.74□□□□□ -1.97
TRM3YDL112W USO1P25386 1790 aa2.74□□□□□ -1.97
TRM3YDL112W TIF1P10081 395 aaKnown RBP2.74□□□□□ -1.97
TRM3YDL112W PAC1P39946 494 aaKnown RBP2.74□□□□□ -1.97
TRM3YDL112W RLF2Q12495 606 aa2.74□□□□□ -1.97
TRM3YDL112W YNL115CP53925 644 aa2.74□□□□□ -1.97
TRM3YDL112W APP1P53933 587 aa2.74□□□□□ -1.97
TRM3YDL112W IML1P47170 1584 aa2.73□□□□□ -1.97
TRM3YDL112W GEA1P47102 1408 aaPredicted RBP2.73□□□□□ -1.97
TRM3YDL112W RPL34AP87262 121 aaPredicted RBP2.73□□□□□ -1.97
TRM3YDL112W PRT1P06103 763 aaKnown RBP2.72□□□□□ -1.97
TRM3YDL112W SPT23P35210 1082 aa2.72□□□□□ -1.97
TRM3YDL112W KXD1P53158 218 aa2.72□□□□□ -1.97
TRM3YDL112W YPR015CQ12531 247 aa2.72□□□□□ -1.97
TRM3YDL112W URN1Q06525 465 aaKnown RBP2.72□□□□□ -1.97
TRM3YDL112W YAP3P38749 330 aa2.72□□□□□ -1.97
TRM3YDL112W ARH1P48360 493 aa2.72□□□□□ -1.97
TRM3YDL112W HST2P53686 357 aa2.72□□□□□ -1.97
TRM3YDL112W BUD20Q08004 166 aaPredicted RBP2.72□□□□□ -1.97
TRM3YDL112W PUS6P53294 404 aa2.71□□□□□ -1.98
TRM3YDL112W ECM23Q02710 187 aa2.71□□□□□ -1.98
TRM3YDL112W PRE3P38624 215 aa2.71□□□□□ -1.98
TRM3YDL112W PDR5P33302 1511 aaKnown RBP2.71□□□□□ -1.98
TRM3YDL112W ENO1P00924 437 aaKnown RBP2.71□□□□□ -1.98
TRM3YDL112W BNR1P40450 1375 aa2.71□□□□□ -1.98
TRM3YDL112W EMP47P43555 445 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms