RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	YPR084W	Q06821	456 aa		5.93	□□□□□ -1.46
PBP4	YDL053C	ENO2	P00925	437 aa	Known RBP	5.92	□□□□□ -1.46
PBP4	YDL053C	KIP2	P28743	706 aa		5.92	□□□□□ -1.46
PBP4	YDL053C	RPL34B	P40525	121 aa	Known RBP	5.92	□□□□□ -1.46
PBP4	YDL053C	SYH1	Q02875	849 aa	Known RBP	5.92	□□□□□ -1.46
PBP4	YDL053C	HED1	Q03937	162 aa		5.92	□□□□□ -1.46
PBP4	YDL053C	MCM16	Q12262	181 aa		5.92	□□□□□ -1.46
PBP4	YDL053C	GUT2	P32191	649 aa		5.91	□□□□□ -1.46
PBP4	YDL053C	IXR1	P33417	597 aa		5.91	□□□□□ -1.46
PBP4	YDL053C	ISF1	P32488	338 aa		5.9	□□□□□ -1.46
PBP4	YDL053C	AIR1	P40507	360 aa	Known RBP	5.9	□□□□□ -1.46
PBP4	YDL053C	ITT1	Q04638	464 aa		5.9	□□□□□ -1.46
PBP4	YDL053C	FRA1	Q07825	749 aa		5.89	□□□□□ -1.47
PBP4	YDL053C	RTG2	P32608	588 aa	Known RBP	5.88	□□□□□ -1.47
PBP4	YDL053C	EMP47	P43555	445 aa		5.88	□□□□□ -1.47
PBP4	YDL053C	YPP1	P46951	817 aa		5.88	□□□□□ -1.47
PBP4	YDL053C	RIM21	P48565	533 aa		5.88	□□□□□ -1.47
PBP4	YDL053C	STE20	Q03497	939 aa	Known RBP	5.88	□□□□□ -1.47
PBP4	YDL053C	RLF2	Q12495	606 aa		5.88	□□□□□ -1.47
PBP4	YDL053C	YPR204W	Q08995	1032 aa		5.87	□□□□□ -1.47
PBP4	YDL053C	CDC4	P07834	779 aa		5.86	□□□□□ -1.47
PBP4	YDL053C	SRC1	Q03707	834 aa		5.86	□□□□□ -1.47
PBP4	YDL053C	MET32	Q12041	191 aa		5.86	□□□□□ -1.47
PBP4	YDL053C	ENO1	P00924	437 aa	Known RBP	5.85	□□□□□ -1.47
PBP4	YDL053C	MRX12	P47084	519 aa		5.85	□□□□□ -1.47
PBP4	YDL053C	MRX10	Q05648	414 aa		5.85	□□□□□ -1.47
PBP4	YDL053C	MRT4	P33201	236 aa	Known RBP	5.84	□□□□□ -1.47
PBP4	YDL053C	EMW1	P42842	904 aa	Known RBP	5.84	□□□□□ -1.47
PBP4	YDL053C	APP1	P53933	587 aa		5.84	□□□□□ -1.47
PBP4	YDL053C	RDS2	P19541	446 aa	Known RBP	5.83	□□□□□ -1.48
PBP4	YDL053C	APL6	P46682	809 aa		5.83	□□□□□ -1.48
PBP4	YDL053C	TRK1	P12685	1235 aa		5.82	□□□□□ -1.48
PBP4	YDL053C	AFT1	P22149	690 aa		5.8	□□□□□ -1.48
PBP4	YDL053C	ATG3	P40344	310 aa		5.8	□□□□□ -1.48
PBP4	YDL053C	MKS1	P34072	584 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	ASH1	P34233	588 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	TTI1	P36097	1038 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	YBL086C	P38177	466 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	SOH1	P38633	127 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	HST3	P53687	447 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	ATG20	Q07528	640 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	ENV9	Q08651	330 aa		5.79	□□□□□ -1.48
PBP4	YDL053C	PEP12	P32854	288 aa		5.78	□□□□□ -1.48
PBP4	YDL053C	UTP13	Q05946	817 aa	Known RBP	5.78	□□□□□ -1.48
PBP4	YDL053C	ISR1	Q06098	443 aa	Known RBP	5.78	□□□□□ -1.48
PBP4	YDL053C	SIS2	P36024	562 aa		5.77	□□□□□ -1.49
PBP4	YDL053C	HAL5	P38970	855 aa	Known RBP	5.77	□□□□□ -1.49
PBP4	YDL053C	MSB3	P48566	633 aa	Predicted RBP	5.77	□□□□□ -1.49
PBP4	YDL053C	UGA3	P26370	528 aa		5.76	□□□□□ -1.49
PBP4	YDL053C	CPS1	P27614	576 aa		5.76	□□□□□ -1.49
PBP4	YDL053C	FBP26	P32604	452 aa		5.76	□□□□□ -1.49
PBP4	YDL053C	DFG5	Q05031	458 aa		5.76	□□□□□ -1.49
PBP4	YDL053C	RTT106	P40161	455 aa		5.75	□□□□□ -1.49
PBP4	YDL053C	ISU1	Q03020	165 aa		5.75	□□□□□ -1.49
PBP4	YDL053C	KTR7	P40504	517 aa		5.73	□□□□□ -1.49
PBP4	YDL053C	BRE2	P43132	505 aa		5.73	□□□□□ -1.49
PBP4	YDL053C	YJR115W	P47152	169 aa		5.73	□□□□□ -1.49
PBP4	YDL053C	STE6	P12866	1290 aa		5.72	□□□□□ -1.49
PBP4	YDL053C	SSA4	P22202	642 aa	Known RBP	5.72	□□□□□ -1.49
PBP4	YDL053C	BDS1	Q08347	646 aa		5.72	□□□□□ -1.49
PBP4	YDL053C	SPT2	P06843	333 aa	Predicted RBP	5.71	□□□□□ -1.5
PBP4	YDL053C	MIP1	P15801	1254 aa		5.71	□□□□□ -1.5
PBP4	YDL053C	TGL4	P36165	910 aa		5.71	□□□□□ -1.5
PBP4	YDL053C	PTK2	P47116	818 aa	Known RBP	5.71	□□□□□ -1.5
PBP4	YDL053C	HDA3	Q06623	655 aa		5.71	□□□□□ -1.5
PBP4	YDL053C	UTR2	P32623	467 aa		5.7	□□□□□ -1.5
PBP4	YDL053C	AAD14	P42884	376 aa		5.7	□□□□□ -1.5
PBP4	YDL053C	SUB2	Q07478	446 aa	Known RBP	5.7	□□□□□ -1.5
PBP4	YDL053C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
PBP4	YDL053C	GCR2	Q01722	534 aa		5.69	□□□□□ -1.5
PBP4	YDL053C	SRF1	Q12516	437 aa		5.69	□□□□□ -1.5
PBP4	YDL053C	ARG82	P07250	355 aa		5.68	□□□□□ -1.5
PBP4	YDL053C	PUP1	P25043	261 aa		5.68	□□□□□ -1.5
PBP4	YDL053C	PHO87	P25360	923 aa		5.68	□□□□□ -1.5
PBP4	YDL053C	AIM9	P40053	627 aa	Known RBP	5.68	□□□□□ -1.5
PBP4	YDL053C	WTM2	Q12206	467 aa		5.68	□□□□□ -1.5
PBP4	YDL053C	RPP2B	P02400	110 aa	Known RBP	5.67	□□□□□ -1.5
PBP4	YDL053C	GAL2	P13181	574 aa		5.67	□□□□□ -1.5
PBP4	YDL053C	DAT1	P13483	248 aa	Known RBP	5.67	□□□□□ -1.5
PBP4	YDL053C	TBS1	P38114	1094 aa		5.67	□□□□□ -1.5
PBP4	YDL053C	YFL034W	P43564	1073 aa		5.67	□□□□□ -1.5
PBP4	YDL053C	ECM23	Q02710	187 aa		5.67	□□□□□ -1.5
PBP4	YDL053C	NOB1	Q08444	459 aa	Known RBP	5.67	□□□□□ -1.5
PBP4	YDL053C	TSC13	Q99190	310 aa		5.67	□□□□□ -1.5
PBP4	YDL053C	PDI1	P17967	522 aa	Known RBP	5.66	□□□□□ -1.5
PBP4	YDL053C	SLX8	P40072	274 aa		5.66	□□□□□ -1.5
PBP4	YDL053C	ACS2	P52910	683 aa	Known RBP	5.66	□□□□□ -1.5
PBP4	YDL053C	HAP4	P14064	554 aa		5.65	□□□□□ -1.5
PBP4	YDL053C	DLD3	P39976	496 aa	Known RBP	5.65	□□□□□ -1.5
PBP4	YDL053C	NUP85	P46673	744 aa		5.65	□□□□□ -1.5
PBP4	YDL053C	YML083C	Q04526	418 aa		5.65	□□□□□ -1.5
PBP4	YDL053C	SWI5	P08153	709 aa		5.64	□□□□□ -1.51
PBP4	YDL053C	DLD1	P32891	587 aa		5.64	□□□□□ -1.51
PBP4	YDL053C	RPS6A	P0CX37	236 aa	Known RBP	5.63	□□□□□ -1.51
PBP4	YDL053C	RPS6B	P0CX38	236 aa	Predicted RBP	5.63	□□□□□ -1.51
PBP4	YDL053C	NTH2	P35172	780 aa		5.63	□□□□□ -1.51
PBP4	YDL053C	UBX7	P38349	436 aa		5.63	□□□□□ -1.51
PBP4	YDL053C	ROM1	P53046	1155 aa		5.63	□□□□□ -1.51
PBP4	YDL053C	GAS4	Q08271	471 aa		5.63	□□□□□ -1.51
PBP4	YDL053C	UTP7	P40055	554 aa	Known RBP	5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms