RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	MCM16	Q12262	181 aa		4.24	□□□□□ -1.73
YDL041W	YDL041W	GUT2	P32191	649 aa		4.23	□□□□□ -1.73
YDL041W	YDL041W	RTG2	P32608	588 aa	Known RBP	4.23	□□□□□ -1.73
YDL041W	YDL041W	IXR1	P33417	597 aa		4.23	□□□□□ -1.73
YDL041W	YDL041W	ENO2	P00925	437 aa	Known RBP	4.22	□□□□□ -1.73
YDL041W	YDL041W	RAS1	P01119	309 aa		4.22	□□□□□ -1.73
YDL041W	YDL041W	SUP45	P12385	437 aa	Known RBP	4.22	□□□□□ -1.73
YDL041W	YDL041W	STE20	Q03497	939 aa	Known RBP	4.22	□□□□□ -1.73
YDL041W	YDL041W	HED1	Q03937	162 aa		4.22	□□□□□ -1.73
YDL041W	YDL041W	MRX12	P47084	519 aa		4.21	□□□□□ -1.74
YDL041W	YDL041W	FRA1	Q07825	749 aa		4.21	□□□□□ -1.74
YDL041W	YDL041W	YPR204W	Q08995	1032 aa		4.21	□□□□□ -1.74
YDL041W	YDL041W	ATG3	P40344	310 aa		4.2	□□□□□ -1.74
YDL041W	YDL041W	EMP47	P43555	445 aa		4.2	□□□□□ -1.74
YDL041W	YDL041W	RIM21	P48565	533 aa		4.2	□□□□□ -1.74
YDL041W	YDL041W	ISF1	P32488	338 aa		4.19	□□□□□ -1.74
YDL041W	YDL041W	SIS2	P36024	562 aa		4.19	□□□□□ -1.74
YDL041W	YDL041W	YPR084W	Q06821	456 aa		4.19	□□□□□ -1.74
YDL041W	YDL041W	ENO1	P00924	437 aa	Known RBP	4.18	□□□□□ -1.74
YDL041W	YDL041W	CDC4	P07834	779 aa		4.17	□□□□□ -1.74
YDL041W	YDL041W	CLA4	P48562	842 aa		4.17	□□□□□ -1.74
YDL041W	YDL041W	ENV9	Q08651	330 aa		4.17	□□□□□ -1.74
YDL041W	YDL041W	AIR1	P40507	360 aa	Known RBP	4.16	□□□□□ -1.74
YDL041W	YDL041W	APP1	P53933	587 aa		4.16	□□□□□ -1.74
YDL041W	YDL041W	MRX10	Q05648	414 aa		4.16	□□□□□ -1.74
YDL041W	YDL041W	SSA4	P22202	642 aa	Known RBP	4.15	□□□□□ -1.75
YDL041W	YDL041W	MRT4	P33201	236 aa	Known RBP	4.15	□□□□□ -1.75
YDL041W	YDL041W	EMW1	P42842	904 aa	Known RBP	4.15	□□□□□ -1.75
YDL041W	YDL041W	HST3	P53687	447 aa		4.15	□□□□□ -1.75
YDL041W	YDL041W	ITT1	Q04638	464 aa		4.15	□□□□□ -1.75
YDL041W	YDL041W	UTP13	Q05946	817 aa	Known RBP	4.15	□□□□□ -1.75
YDL041W	YDL041W	ATG20	Q07528	640 aa		4.15	□□□□□ -1.75
YDL041W	YDL041W	TRK1	P12685	1235 aa		4.14	□□□□□ -1.75
YDL041W	YDL041W	MKS1	P34072	584 aa		4.14	□□□□□ -1.75
YDL041W	YDL041W	RTT106	P40161	455 aa		4.14	□□□□□ -1.75
YDL041W	YDL041W	APL6	P46682	809 aa		4.14	□□□□□ -1.75
YDL041W	YDL041W	MET32	Q12041	191 aa		4.14	□□□□□ -1.75
YDL041W	YDL041W	RPP2B	P02400	110 aa	Known RBP	4.13	□□□□□ -1.75
YDL041W	YDL041W	RDS2	P19541	446 aa	Known RBP	4.13	□□□□□ -1.75
YDL041W	YDL041W	UGA3	P26370	528 aa		4.13	□□□□□ -1.75
YDL041W	YDL041W	FBP26	P32604	452 aa		4.13	□□□□□ -1.75
YDL041W	YDL041W	TTI1	P36097	1038 aa		4.13	□□□□□ -1.75
YDL041W	YDL041W	SOH1	P38633	127 aa		4.13	□□□□□ -1.75
YDL041W	YDL041W	ISR1	Q06098	443 aa	Known RBP	4.13	□□□□□ -1.75
YDL041W	YDL041W	AFT1	P22149	690 aa		4.12	□□□□□ -1.75
YDL041W	YDL041W	CPS1	P27614	576 aa		4.12	□□□□□ -1.75
YDL041W	YDL041W	ASH1	P34233	588 aa		4.12	□□□□□ -1.75
YDL041W	YDL041W	YBL086C	P38177	466 aa		4.12	□□□□□ -1.75
YDL041W	YDL041W	PEP12	P32854	288 aa		4.11	□□□□□ -1.75
YDL041W	YDL041W	KTR7	P40504	517 aa		4.11	□□□□□ -1.75
YDL041W	YDL041W	MSB3	P48566	633 aa	Predicted RBP	4.11	□□□□□ -1.75
YDL041W	YDL041W	BDS1	Q08347	646 aa		4.11	□□□□□ -1.75
YDL041W	YDL041W	ISU1	Q03020	165 aa		4.1	□□□□□ -1.75
YDL041W	YDL041W	SRC1	Q03707	834 aa		4.1	□□□□□ -1.75
YDL041W	YDL041W	DFG5	Q05031	458 aa		4.1	□□□□□ -1.75
YDL041W	YDL041W	SRF1	Q12516	437 aa		4.1	□□□□□ -1.75
YDL041W	YDL041W	MIP1	P15801	1254 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	UTR2	P32623	467 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	TGL4	P36165	910 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	HAL5	P38970	855 aa	Known RBP	4.09	□□□□□ -1.75
YDL041W	YDL041W	BRE2	P43132	505 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	YFL034W	P43564	1073 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	GCR2	Q01722	534 aa		4.09	□□□□□ -1.75
YDL041W	YDL041W	TBS1	P38114	1094 aa		4.08	□□□□□ -1.76
YDL041W	YDL041W	DLD3	P39976	496 aa	Known RBP	4.08	□□□□□ -1.76
YDL041W	YDL041W	MON2	P48563	1636 aa	Predicted RBP	4.08	□□□□□ -1.76
YDL041W	YDL041W	HDA3	Q06623	655 aa		4.08	□□□□□ -1.76
YDL041W	YDL041W	SUB2	Q07478	446 aa	Known RBP	4.08	□□□□□ -1.76
YDL041W	YDL041W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
YDL041W	YDL041W	ARG82	P07250	355 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	SSA1	P10591	642 aa	Known RBP	4.07	□□□□□ -1.76
YDL041W	YDL041W	STE6	P12866	1290 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	GAL2	P13181	574 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	DAT1	P13483	248 aa	Known RBP	4.07	□□□□□ -1.76
YDL041W	YDL041W	HAP4	P14064	554 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	PHO87	P25360	923 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	AIM9	P40053	627 aa	Known RBP	4.07	□□□□□ -1.76
YDL041W	YDL041W	PTK2	P47116	818 aa	Known RBP	4.07	□□□□□ -1.76
YDL041W	YDL041W	TSC13	Q99190	310 aa		4.07	□□□□□ -1.76
YDL041W	YDL041W	SPT2	P06843	333 aa	Predicted RBP	4.06	□□□□□ -1.76
YDL041W	YDL041W	PUP1	P25043	261 aa		4.06	□□□□□ -1.76
YDL041W	YDL041W	AAD14	P42884	376 aa		4.06	□□□□□ -1.76
YDL041W	YDL041W	YJR115W	P47152	169 aa		4.06	□□□□□ -1.76
YDL041W	YDL041W	ECM23	Q02710	187 aa		4.06	□□□□□ -1.76
YDL041W	YDL041W	PDI1	P17967	522 aa	Known RBP	4.05	□□□□□ -1.76
YDL041W	YDL041W	GAS4	Q08271	471 aa		4.05	□□□□□ -1.76
YDL041W	YDL041W	UBX7	P38349	436 aa		4.04	□□□□□ -1.76
YDL041W	YDL041W	ACS2	P52910	683 aa	Known RBP	4.04	□□□□□ -1.76
YDL041W	YDL041W	RPL34A	P87262	121 aa	Predicted RBP	4.04	□□□□□ -1.76
YDL041W	YDL041W	WTM2	Q12206	467 aa		4.04	□□□□□ -1.76
YDL041W	YDL041W	SLX8	P40072	274 aa		4.03	□□□□□ -1.76
YDL041W	YDL041W	YML083C	Q04526	418 aa		4.03	□□□□□ -1.76
YDL041W	YDL041W	NOB1	Q08444	459 aa	Known RBP	4.03	□□□□□ -1.76
YDL041W	YDL041W	CYT1	P07143	309 aa		4.02	□□□□□ -1.77
YDL041W	YDL041W	SWI5	P08153	709 aa		4.02	□□□□□ -1.77
YDL041W	YDL041W	RPS6A	P0CX37	236 aa	Known RBP	4.02	□□□□□ -1.77
YDL041W	YDL041W	RPS6B	P0CX38	236 aa	Predicted RBP	4.02	□□□□□ -1.77
YDL041W	YDL041W	NTH2	P35172	780 aa		4.02	□□□□□ -1.77
YDL041W	YDL041W	NUP85	P46673	744 aa		4.02	□□□□□ -1.77
YDL041W	YDL041W	LSC2	P53312	427 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms