RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YRF1-2P40105 1681 aa9.66□□□□□ -0.86
ABP1YCR088W VPS24P36095 224 aaKnown RBP9.65□□□□□ -0.87
ABP1YCR088W YNL050CP53952 270 aa9.65□□□□□ -0.87
ABP1YCR088W NTH2P35172 780 aa9.64□□□□□ -0.87
ABP1YCR088W CAB3P36076 571 aa9.64□□□□□ -0.87
ABP1YCR088W CSI1Q04368 295 aa9.64□□□□□ -0.87
ABP1YCR088W MSP1P28737 362 aa9.63□□□□□ -0.87
ABP1YCR088W ZDS1P50111 915 aaKnown RBP9.63□□□□□ -0.87
ABP1YCR088W NKP2Q06162 153 aa9.63□□□□□ -0.87
ABP1YCR088W SPO1P53541 631 aa9.62□□□□□ -0.87
ABP1YCR088W YNG2P38806 282 aaKnown RBP9.61□□□□□ -0.87
ABP1YCR088W REB1P21538 810 aa9.6□□□□□ -0.87
ABP1YCR088W LSP1Q12230 341 aaKnown RBP9.6□□□□□ -0.87
ABP1YCR088W URB1P34241 1764 aaKnown RBP9.59□□□□□ -0.87
ABP1YCR088W EBP2P36049 427 aaKnown RBP9.59□□□□□ -0.87
ABP1YCR088W MAM1P40065 302 aa9.59□□□□□ -0.87
ABP1YCR088W BMS1Q08965 1183 aaKnown RBP9.59□□□□□ -0.87
ABP1YCR088W HSP104P31539 908 aaKnown RBP9.58□□□□□ -0.88
ABP1YCR088W KNS1P32350 737 aaPredicted RBP9.58□□□□□ -0.88
ABP1YCR088W YPP1P46951 817 aa9.58□□□□□ -0.88
ABP1YCR088W PRY3P47033 881 aa9.58□□□□□ -0.88
ABP1YCR088W YGR122WP53272 402 aa9.58□□□□□ -0.88
ABP1YCR088W COQ4O13525 335 aa9.58□□□□□ -0.88
ABP1YCR088W DLD1P32891 587 aa9.58□□□□□ -0.88
ABP1YCR088W RFC1P38630 861 aaKnown RBP9.58□□□□□ -0.88
ABP1YCR088W ITC1P53125 1264 aa9.58□□□□□ -0.88
ABP1YCR088W RAD50P12753 1312 aa9.57□□□□□ -0.88
ABP1YCR088W FKS3Q04952 1785 aa9.57□□□□□ -0.88
ABP1YCR088W ARL1P38116 183 aaKnown RBP9.57□□□□□ -0.88
ABP1YCR088W BRN1P38170 754 aa9.57□□□□□ -0.88
ABP1YCR088W TEA1P47988 759 aa9.57□□□□□ -0.88
ABP1YCR088W SRS2P12954 1174 aa9.56□□□□□ -0.88
ABP1YCR088W NMD2P38798 1089 aaKnown RBP9.56□□□□□ -0.88
ABP1YCR088W EDE1P34216 1381 aa9.56□□□□□ -0.88
ABP1YCR088W RPS19AP07280 144 aaKnown RBP9.55□□□□□ -0.88
ABP1YCR088W RPS19BP07281 144 aaPredicted RBP9.55□□□□□ -0.88
ABP1YCR088W RAD24P32641 659 aa9.55□□□□□ -0.88
ABP1YCR088W GCR2Q01722 534 aa9.55□□□□□ -0.88
ABP1YCR088W ECM16Q04217 1267 aaKnown RBP9.55□□□□□ -0.88
ABP1YCR088W NUP145P49687 1317 aa9.55□□□□□ -0.88
ABP1YCR088W HXT13P39924 564 aa9.54□□□□□ -0.88
ABP1YCR088W HXT17P53631 564 aa9.52□□□□□ -0.88
ABP1YCR088W TSR3Q12094 313 aaKnown RBP9.52□□□□□ -0.88
ABP1YCR088W DUR1,2P32528 1835 aaKnown RBP9.52□□□□□ -0.89
ABP1YCR088W AOS1Q06624 347 aa9.52□□□□□ -0.89
ABP1YCR088W SWC3P31376 625 aa9.5□□□□□ -0.89
ABP1YCR088W NPA3P47122 385 aa9.5□□□□□ -0.89
ABP1YCR088W NOT3P06102 836 aaKnown RBP9.49□□□□□ -0.89
ABP1YCR088W ROM2P51862 1356 aaKnown RBP9.48□□□□□ -0.89
ABP1YCR088W CDC16P09798 840 aa9.47□□□□□ -0.89
ABP1YCR088W GCD7P32502 381 aaPredicted RBP9.47□□□□□ -0.89
ABP1YCR088W HAP5Q02516 242 aa9.47□□□□□ -0.89
ABP1YCR088W RAD4P14736 754 aa9.47□□□□□ -0.89
ABP1YCR088W YGL081WP53156 320 aa9.47□□□□□ -0.89
ABP1YCR088W VPS20Q04272 221 aa9.47□□□□□ -0.89
ABP1YCR088W YOL057WQ08225 711 aa9.47□□□□□ -0.89
ABP1YCR088W ZDS2P54786 942 aa9.46□□□□□ -0.9
ABP1YCR088W NOP8Q08287 484 aaPredicted RBP9.46□□□□□ -0.9
ABP1YCR088W TRL1P09880 827 aaKnown RBP9.45□□□□□ -0.9
ABP1YCR088W MRP7P12687 371 aa9.45□□□□□ -0.9
ABP1YCR088W BOI2P39969 1040 aa9.45□□□□□ -0.9
ABP1YCR088W THI12P42883 340 aa9.45□□□□□ -0.9
ABP1YCR088W THI5P43534 340 aa9.45□□□□□ -0.9
ABP1YCR088W THI11P47183 340 aa9.45□□□□□ -0.9
ABP1YCR088W MSB3P48566 633 aaPredicted RBP9.45□□□□□ -0.9
ABP1YCR088W THI13Q07748 340 aa9.45□□□□□ -0.9
ABP1YCR088W SLM3Q12093 417 aa9.45□□□□□ -0.9
ABP1YCR088W PRP5P21372 849 aaPredicted RBP9.45□□□□□ -0.9
ABP1YCR088W UGA3P26370 528 aa9.45□□□□□ -0.9
ABP1YCR088W CTR9P89105 1077 aa9.45□□□□□ -0.9
ABP1YCR088W CTF4Q01454 927 aa9.45□□□□□ -0.9
ABP1YCR088W NSE3Q05541 303 aa9.45□□□□□ -0.9
ABP1YCR088W VAS1P07806 1104 aaKnown RBP9.44□□□□□ -0.9
ABP1YCR088W RCR1P38212 213 aa9.44□□□□□ -0.9
ABP1YCR088W CIR1P42940 261 aa9.44□□□□□ -0.9
ABP1YCR088W BDP1P46678 594 aa9.44□□□□□ -0.9
ABP1YCR088W YDR306CQ06640 478 aa9.44□□□□□ -0.9
ABP1YCR088W KCC4P25389 1037 aa9.43□□□□□ -0.9
ABP1YCR088W TCB2P48231 1178 aa9.43□□□□□ -0.9
ABP1YCR088W BDH2P39713 417 aa9.42□□□□□ -0.9
ABP1YCR088W RSC1P53236 928 aa9.42□□□□□ -0.9
ABP1YCR088W YMR196WQ04336 1088 aa9.42□□□□□ -0.9
ABP1YCR088W PRP45P28004 379 aaPredicted RBP9.42□□□□□ -0.9
ABP1YCR088W RMD1Q03441 430 aa9.42□□□□□ -0.9
ABP1YCR088W LYS2P07702 1392 aa9.41□□□□□ -0.9
ABP1YCR088W HRQ1Q05549 1077 aa9.41□□□□□ -0.9
ABP1YCR088W ALE1Q08548 619 aa9.41□□□□□ -0.9
ABP1YCR088W RNR2P09938 399 aaKnown RBP9.4□□□□□ -0.9
ABP1YCR088W RKM3P38222 552 aa9.4□□□□□ -0.9
ABP1YCR088W XKS1P42826 600 aa9.4□□□□□ -0.9
ABP1YCR088W COG8Q04632 607 aa9.4□□□□□ -0.9
ABP1YCR088W INP54Q08227 384 aaKnown RBP9.4□□□□□ -0.9
ABP1YCR088W LCD1Q04377 747 aa9.4□□□□□ -0.91
ABP1YCR088W NUP133P36161 1157 aa9.39□□□□□ -0.91
ABP1YCR088W RVS167P39743 482 aaKnown RBP9.39□□□□□ -0.91
ABP1YCR088W HST1P53685 503 aa9.38□□□□□ -0.91
ABP1YCR088W BIK1P11709 440 aa9.37□□□□□ -0.91
ABP1YCR088W KRE33P53914 1056 aaKnown RBP9.37□□□□□ -0.91
ABP1YCR088W RPN12P32496 274 aa9.37□□□□□ -0.91
ABP1YCR088W MNN4P36044 1178 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms