RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeastyeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCM1YCR065W ITT1Q04638 464 aa5.91□□□□□ -1.46
HCM1YCR065W CLA4P48562 842 aa5.91□□□□□ -1.46
HCM1YCR065W NAF1P53919 492 aaKnown RBP5.91□□□□□ -1.46
HCM1YCR065W YPR084WQ06821 456 aa5.91□□□□□ -1.46
HCM1YCR065W AIM44Q99299 758 aa5.91□□□□□ -1.46
HCM1YCR065W TRK1P12685 1235 aa5.9□□□□□ -1.47
HCM1YCR065W SPT5P27692 1063 aaKnown RBP5.9□□□□□ -1.47
HCM1YCR065W ISF1P32488 338 aa5.9□□□□□ -1.47
HCM1YCR065W TEC1P18412 486 aa5.89□□□□□ -1.47
HCM1YCR065W VAC17P25591 423 aa5.89□□□□□ -1.47
HCM1YCR065W RLF2Q12495 606 aa5.89□□□□□ -1.47
HCM1YCR065W RTG2P32608 588 aaKnown RBP5.88□□□□□ -1.47
HCM1YCR065W MCM16Q12262 181 aa5.88□□□□□ -1.47
HCM1YCR065W RPL34BP40525 121 aaKnown RBP5.88□□□□□ -1.47
HCM1YCR065W RIM21P48565 533 aa5.88□□□□□ -1.47
HCM1YCR065W ENO1P00924 437 aaKnown RBP5.86□□□□□ -1.47
HCM1YCR065W EMP47P43555 445 aa5.86□□□□□ -1.47
HCM1YCR065W YRB30P53107 440 aaPredicted RBP5.86□□□□□ -1.47
HCM1YCR065W YPR204WQ08995 1032 aa5.86□□□□□ -1.47
HCM1YCR065W YPL062WQ02781 134 aa5.85□□□□□ -1.47
HCM1YCR065W KIP2P28743 706 aa5.85□□□□□ -1.47
HCM1YCR065W AIR1P40507 360 aaKnown RBP5.85□□□□□ -1.47
HCM1YCR065W FRA1Q07825 749 aa5.85□□□□□ -1.47
HCM1YCR065W RDS2P19541 446 aaKnown RBP5.84□□□□□ -1.47
HCM1YCR065W MRX10Q05648 414 aa5.84□□□□□ -1.47
HCM1YCR065W GUT2P32191 649 aa5.83□□□□□ -1.48
HCM1YCR065W IXR1P33417 597 aa5.83□□□□□ -1.48
HCM1YCR065W SYH1Q02875 849 aaKnown RBP5.83□□□□□ -1.48
HCM1YCR065W STE20Q03497 939 aaKnown RBP5.82□□□□□ -1.48
HCM1YCR065W HED1Q03937 162 aa5.82□□□□□ -1.48
HCM1YCR065W APP1P53933 587 aa5.81□□□□□ -1.48
HCM1YCR065W APL6P46682 809 aa5.8□□□□□ -1.48
HCM1YCR065W YPP1P46951 817 aa5.8□□□□□ -1.48
HCM1YCR065W MET32Q12041 191 aa5.8□□□□□ -1.48
HCM1YCR065W CPS1P27614 576 aa5.79□□□□□ -1.48
HCM1YCR065W TTI1P36097 1038 aa5.79□□□□□ -1.48
HCM1YCR065W EMW1P42842 904 aaKnown RBP5.77□□□□□ -1.49
HCM1YCR065W PEP12P32854 288 aa5.76□□□□□ -1.49
HCM1YCR065W MRT4P33201 236 aaKnown RBP5.76□□□□□ -1.49
HCM1YCR065W SOH1P38633 127 aa5.75□□□□□ -1.49
HCM1YCR065W HAL5P38970 855 aaKnown RBP5.75□□□□□ -1.49
HCM1YCR065W MRX12P47084 519 aa5.75□□□□□ -1.49
HCM1YCR065W CDC4P07834 779 aa5.75□□□□□ -1.49
HCM1YCR065W ISR1Q06098 443 aaKnown RBP5.75□□□□□ -1.49
HCM1YCR065W ATG20Q07528 640 aa5.75□□□□□ -1.49
HCM1YCR065W ENV9Q08651 330 aa5.75□□□□□ -1.49
HCM1YCR065W KTR7P40504 517 aa5.73□□□□□ -1.49
HCM1YCR065W SIS2P36024 562 aa5.72□□□□□ -1.49
HCM1YCR065W YBL086CP38177 466 aa5.72□□□□□ -1.49
HCM1YCR065W SUB2Q07478 446 aaKnown RBP5.72□□□□□ -1.49
HCM1YCR065W MKS1P34072 584 aa5.72□□□□□ -1.49
HCM1YCR065W FBP26P32604 452 aa5.71□□□□□ -1.5
HCM1YCR065W ASH1P34233 588 aa5.71□□□□□ -1.5
HCM1YCR065W UTP13Q05946 817 aaKnown RBP5.71□□□□□ -1.5
HCM1YCR065W AFT1P22149 690 aa5.7□□□□□ -1.5
HCM1YCR065W PUP1P25043 261 aa5.7□□□□□ -1.5
HCM1YCR065W TGL4P36165 910 aa5.7□□□□□ -1.5
HCM1YCR065W NOB1Q08444 459 aaKnown RBP5.7□□□□□ -1.5
HCM1YCR065W SSA4P22202 642 aaKnown RBP5.69□□□□□ -1.5
HCM1YCR065W ATG3P40344 310 aa5.69□□□□□ -1.5
HCM1YCR065W ORC1P54784 914 aaPredicted RBP5.69□□□□□ -1.5
HCM1YCR065W YML083CQ04526 418 aa5.69□□□□□ -1.5
HCM1YCR065W DFG5Q05031 458 aa5.69□□□□□ -1.5
HCM1YCR065W MIP1P15801 1254 aa5.69□□□□□ -1.5
HCM1YCR065W ISU1Q03020 165 aa5.69□□□□□ -1.5
HCM1YCR065W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
HCM1YCR065W YFR016CP43597 1233 aaKnown RBP5.68□□□□□ -1.5
HCM1YCR065W HST3P53687 447 aa5.68□□□□□ -1.5
HCM1YCR065W HDA3Q06623 655 aa5.68□□□□□ -1.5
HCM1YCR065W TOP1P04786 769 aa5.67□□□□□ -1.5
HCM1YCR065W UGA3P26370 528 aa5.67□□□□□ -1.5
HCM1YCR065W MSB3P48566 633 aaPredicted RBP5.67□□□□□ -1.5
HCM1YCR065W ECM23Q02710 187 aa5.67□□□□□ -1.5
HCM1YCR065W STE6P12866 1290 aa5.66□□□□□ -1.5
HCM1YCR065W GAL2P13181 574 aa5.66□□□□□ -1.5
HCM1YCR065W ACS2P52910 683 aaKnown RBP5.66□□□□□ -1.5
HCM1YCR065W PDI1P17967 522 aaKnown RBP5.65□□□□□ -1.51
HCM1YCR065W GAR1P28007 205 aaKnown RBP5.65□□□□□ -1.51
HCM1YCR065W YJR115WP47152 169 aa5.65□□□□□ -1.51
HCM1YCR065W SNU71P53207 620 aaKnown RBP5.65□□□□□ -1.51
HCM1YCR065W AIM9P40053 627 aaKnown RBP5.64□□□□□ -1.51
HCM1YCR065W BRE2P43132 505 aa5.64□□□□□ -1.51
HCM1YCR065W BDS1Q08347 646 aa5.64□□□□□ -1.51
HCM1YCR065W SPT2P06843 333 aaPredicted RBP5.63□□□□□ -1.51
HCM1YCR065W PHO87P25360 923 aa5.63□□□□□ -1.51
HCM1YCR065W UTR2P32623 467 aa5.63□□□□□ -1.51
HCM1YCR065W PTK2P47116 818 aaKnown RBP5.63□□□□□ -1.51
HCM1YCR065W ROM1P53046 1155 aa5.63□□□□□ -1.51
HCM1YCR065W TSC13Q99190 310 aa5.63□□□□□ -1.51
HCM1YCR065W UBX7P38349 436 aa5.62□□□□□ -1.51
HCM1YCR065W SLX8P40072 274 aa5.62□□□□□ -1.51
HCM1YCR065W AAD14P42884 376 aa5.62□□□□□ -1.51
HCM1YCR065W DAT1P13483 248 aaKnown RBP5.61□□□□□ -1.51
HCM1YCR065W KRI1P42846 591 aaKnown RBP5.61□□□□□ -1.51
HCM1YCR065W WTM2Q12206 467 aa5.61□□□□□ -1.51
HCM1YCR065W SWI5P08153 709 aa5.6□□□□□ -1.51
HCM1YCR065W SSA1P10591 642 aaKnown RBP5.6□□□□□ -1.51
HCM1YCR065W HAP4P14064 554 aa5.59□□□□□ -1.51
HCM1YCR065W DLD1P32891 587 aa5.59□□□□□ -1.51
HCM1YCR065W UTP7P40055 554 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms