RNA–Protein interactions for RNA: YBR266C

SLM6, Transcript of Protein with a potential role in actin cytoskeleton organization, yeast

Gene SLM6, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLM6	YBR266C	TEC1	P18412	486 aa		4.79	□□□□□ -1.64
SLM6	YBR266C	ISF1	P32488	338 aa		4.79	□□□□□ -1.64
SLM6	YBR266C	IXR1	P33417	597 aa		4.79	□□□□□ -1.64
SLM6	YBR266C	TIF1	P10081	395 aa	Known RBP	4.78	□□□□□ -1.64
SLM6	YBR266C	SUP45	P12385	437 aa	Known RBP	4.78	□□□□□ -1.64
SLM6	YBR266C	NAF1	P53919	492 aa	Known RBP	4.78	□□□□□ -1.64
SLM6	YBR266C	SYH1	Q02875	849 aa	Known RBP	4.78	□□□□□ -1.64
SLM6	YBR266C	SPT5	P27692	1063 aa	Known RBP	4.77	□□□□□ -1.65
SLM6	YBR266C	RPL34B	P40525	121 aa	Known RBP	4.77	□□□□□ -1.65
SLM6	YBR266C	HED1	Q03937	162 aa		4.77	□□□□□ -1.65
SLM6	YBR266C	YPR084W	Q06821	456 aa		4.77	□□□□□ -1.65
SLM6	YBR266C	MCM16	Q12262	181 aa		4.77	□□□□□ -1.65
SLM6	YBR266C	EMP47	P43555	445 aa		4.76	□□□□□ -1.65
SLM6	YBR266C	APP1	P53933	587 aa		4.76	□□□□□ -1.65
SLM6	YBR266C	MET32	Q12041	191 aa		4.76	□□□□□ -1.65
SLM6	YBR266C	GUT2	P32191	649 aa		4.75	□□□□□ -1.65
SLM6	YBR266C	RTG2	P32608	588 aa	Known RBP	4.75	□□□□□ -1.65
SLM6	YBR266C	YPR204W	Q08995	1032 aa		4.75	□□□□□ -1.65
SLM6	YBR266C	STE20	Q03497	939 aa	Known RBP	4.74	□□□□□ -1.65
SLM6	YBR266C	ENO1	P00924	437 aa	Known RBP	4.73	□□□□□ -1.65
SLM6	YBR266C	CDC4	P07834	779 aa		4.73	□□□□□ -1.65
SLM6	YBR266C	RIM21	P48565	533 aa		4.73	□□□□□ -1.65
SLM6	YBR266C	GCR2	Q01722	534 aa		4.73	□□□□□ -1.65
SLM6	YBR266C	FRA1	Q07825	749 aa		4.73	□□□□□ -1.65
SLM6	YBR266C	BRE2	P43132	505 aa		4.72	□□□□□ -1.65
SLM6	YBR266C	ASH1	P34233	588 aa		4.71	□□□□□ -1.66
SLM6	YBR266C	MRX10	Q05648	414 aa		4.71	□□□□□ -1.66
SLM6	YBR266C	RDS2	P19541	446 aa	Known RBP	4.7	□□□□□ -1.66
SLM6	YBR266C	MRT4	P33201	236 aa	Known RBP	4.7	□□□□□ -1.66
SLM6	YBR266C	EMW1	P42842	904 aa	Known RBP	4.7	□□□□□ -1.66
SLM6	YBR266C	YPP1	P46951	817 aa		4.7	□□□□□ -1.66
SLM6	YBR266C	SOH1	P38633	127 aa		4.69	□□□□□ -1.66
SLM6	YBR266C	HST3	P53687	447 aa		4.69	□□□□□ -1.66
SLM6	YBR266C	RLF2	Q12495	606 aa		4.69	□□□□□ -1.66
SLM6	YBR266C	AFT1	P22149	690 aa		4.68	□□□□□ -1.66
SLM6	YBR266C	TAF7	Q05021	590 aa		4.68	□□□□□ -1.66
SLM6	YBR266C	ENV9	Q08651	330 aa		4.68	□□□□□ -1.66
SLM6	YBR266C	CPS1	P27614	576 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	MKS1	P34072	584 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	YBL086C	P38177	466 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	KTR7	P40504	517 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	APL6	P46682	809 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	MRX12	P47084	519 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	ISR1	Q06098	443 aa	Known RBP	4.67	□□□□□ -1.66
SLM6	YBR266C	ATG20	Q07528	640 aa		4.67	□□□□□ -1.66
SLM6	YBR266C	UGA3	P26370	528 aa		4.66	□□□□□ -1.66
SLM6	YBR266C	TTI1	P36097	1038 aa		4.66	□□□□□ -1.66
SLM6	YBR266C	HAL5	P38970	855 aa	Known RBP	4.66	□□□□□ -1.66
SLM6	YBR266C	DFG5	Q05031	458 aa		4.66	□□□□□ -1.66
SLM6	YBR266C	YJR115W	P47152	169 aa		4.65	□□□□□ -1.67
SLM6	YBR266C	FBP26	P32604	452 aa		4.64	□□□□□ -1.67
SLM6	YBR266C	PEP12	P32854	288 aa		4.64	□□□□□ -1.67
SLM6	YBR266C	ATG3	P40344	310 aa		4.64	□□□□□ -1.67
SLM6	YBR266C	MSB3	P48566	633 aa	Predicted RBP	4.64	□□□□□ -1.67
SLM6	YBR266C	MIP1	P15801	1254 aa		4.63	□□□□□ -1.67
SLM6	YBR266C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SLM6	YBR266C	ISU1	Q03020	165 aa		4.63	□□□□□ -1.67
SLM6	YBR266C	GAR1	P28007	205 aa	Known RBP	4.62	□□□□□ -1.67
SLM6	YBR266C	PTK2	P47116	818 aa	Known RBP	4.62	□□□□□ -1.67
SLM6	YBR266C	UTP13	Q05946	817 aa	Known RBP	4.62	□□□□□ -1.67
SLM6	YBR266C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SLM6	YBR266C	STE6	P12866	1290 aa		4.61	□□□□□ -1.67
SLM6	YBR266C	HDA3	Q06623	655 aa		4.61	□□□□□ -1.67
SLM6	YBR266C	BDS1	Q08347	646 aa		4.61	□□□□□ -1.67
SLM6	YBR266C	DAT1	P13483	248 aa	Known RBP	4.6	□□□□□ -1.67
SLM6	YBR266C	UTR2	P32623	467 aa		4.6	□□□□□ -1.67
SLM6	YBR266C	TGL4	P36165	910 aa		4.6	□□□□□ -1.67
SLM6	YBR266C	SRF1	Q12516	437 aa		4.6	□□□□□ -1.67
SLM6	YBR266C	DLD1	P32891	587 aa		4.59	□□□□□ -1.67
SLM6	YBR266C	AAD14	P42884	376 aa		4.59	□□□□□ -1.67
SLM6	YBR266C	WTM2	Q12206	467 aa		4.59	□□□□□ -1.67
SLM6	YBR266C	SPT2	P06843	333 aa	Predicted RBP	4.58	□□□□□ -1.68
SLM6	YBR266C	ARG82	P07250	355 aa		4.58	□□□□□ -1.68
SLM6	YBR266C	PDI1	P17967	522 aa	Known RBP	4.58	□□□□□ -1.68
SLM6	YBR266C	SSA4	P22202	642 aa	Known RBP	4.58	□□□□□ -1.68
SLM6	YBR266C	SIS2	P36024	562 aa		4.58	□□□□□ -1.68
SLM6	YBR266C	ECM23	Q02710	187 aa		4.58	□□□□□ -1.68
SLM6	YBR266C	PUP1	P25043	261 aa		4.57	□□□□□ -1.68
SLM6	YBR266C	MET22	P32179	357 aa		4.57	□□□□□ -1.68
SLM6	YBR266C	AIM9	P40053	627 aa	Known RBP	4.57	□□□□□ -1.68
SLM6	YBR266C	RTT106	P40161	455 aa		4.57	□□□□□ -1.68
SLM6	YBR266C	ACS2	P52910	683 aa	Known RBP	4.57	□□□□□ -1.68
SLM6	YBR266C	YML083C	Q04526	418 aa		4.57	□□□□□ -1.68
SLM6	YBR266C	NOB1	Q08444	459 aa	Known RBP	4.57	□□□□□ -1.68
SLM6	YBR266C	GAL2	P13181	574 aa		4.56	□□□□□ -1.68
SLM6	YBR266C	NTH2	P35172	780 aa		4.56	□□□□□ -1.68
SLM6	YBR266C	TBS1	P38114	1094 aa		4.56	□□□□□ -1.68
SLM6	YBR266C	UTP7	P40055	554 aa	Known RBP	4.56	□□□□□ -1.68
SLM6	YBR266C	SLX8	P40072	274 aa		4.56	□□□□□ -1.68
SLM6	YBR266C	YDR444W	Q04093	687 aa		4.56	□□□□□ -1.68
SLM6	YBR266C	SUB2	Q07478	446 aa	Known RBP	4.56	□□□□□ -1.68
SLM6	YBR266C	PHO87	P25360	923 aa		4.55	□□□□□ -1.68
SLM6	YBR266C	DLD3	P39976	496 aa	Known RBP	4.55	□□□□□ -1.68
SLM6	YBR266C	NUP85	P46673	744 aa		4.55	□□□□□ -1.68
SLM6	YBR266C	TSC13	Q99190	310 aa		4.55	□□□□□ -1.68
SLM6	YBR266C	SWI5	P08153	709 aa		4.54	□□□□□ -1.68
SLM6	YBR266C	RPS6A	P0CX37	236 aa	Known RBP	4.54	□□□□□ -1.68
SLM6	YBR266C	RPS6B	P0CX38	236 aa	Predicted RBP	4.54	□□□□□ -1.68
SLM6	YBR266C	UBX7	P38349	436 aa		4.54	□□□□□ -1.68
SLM6	YBR266C	LSC2	P53312	427 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms