RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	MRT4	P33201	236 aa	Known RBP	8.92	□□□□□ -0.98
UBS1	YBR165W	AFT1	P22149	690 aa		8.9	□□□□□ -0.98
UBS1	YBR165W	YDJ1	P25491	409 aa	Known RBP	8.89	□□□□□ -0.99
UBS1	YBR165W	ASH1	P34233	588 aa		8.89	□□□□□ -0.99
UBS1	YBR165W	SUP45	P12385	437 aa	Known RBP	8.88	□□□□□ -0.99
UBS1	YBR165W	GUT2	P32191	649 aa		8.88	□□□□□ -0.99
UBS1	YBR165W	YJL007C	P47080	104 aa		8.88	□□□□□ -0.99
UBS1	YBR165W	FRA1	Q07825	749 aa		8.88	□□□□□ -0.99
UBS1	YBR165W	EMW1	P42842	904 aa	Known RBP	8.87	□□□□□ -0.99
UBS1	YBR165W	BIM1	P40013	344 aa		8.85	□□□□□ -0.99
UBS1	YBR165W	RTT106	P40161	455 aa		8.85	□□□□□ -0.99
UBS1	YBR165W	MSB3	P48566	633 aa	Predicted RBP	8.85	□□□□□ -0.99
UBS1	YBR165W	HST3	P53687	447 aa		8.85	□□□□□ -0.99
UBS1	YBR165W	MCM16	Q12262	181 aa		8.85	□□□□□ -0.99
UBS1	YBR165W	BRE2	P43132	505 aa		8.84	□□□□□ -0.99
UBS1	YBR165W	MRX12	P47084	519 aa		8.84	□□□□□ -0.99
UBS1	YBR165W	YNL108C	P53929	270 aa		8.84	□□□□□ -0.99
UBS1	YBR165W	STE20	Q03497	939 aa	Known RBP	8.84	□□□□□ -0.99
UBS1	YBR165W	ITT1	Q04638	464 aa		8.84	□□□□□ -0.99
UBS1	YBR165W	YBL086C	P38177	466 aa		8.82	□□□□□ -1
UBS1	YBR165W	ATG32	P40458	529 aa		8.82	□□□□□ -1
UBS1	YBR165W	YPP1	P46951	817 aa		8.82	□□□□□ -1
UBS1	YBR165W	GCR2	Q01722	534 aa		8.82	□□□□□ -1
UBS1	YBR165W	ENO2	P00925	437 aa	Known RBP	8.8	□□□□□ -1
UBS1	YBR165W	EMP47	P43555	445 aa		8.8	□□□□□ -1
UBS1	YBR165W	APL6	P46682	809 aa		8.8	□□□□□ -1
UBS1	YBR165W	APP1	P53933	587 aa		8.8	□□□□□ -1
UBS1	YBR165W	TIF1	P10081	395 aa	Known RBP	8.79	□□□□□ -1
UBS1	YBR165W	UGA3	P26370	528 aa		8.78	□□□□□ -1
UBS1	YBR165W	RIM21	P48565	533 aa		8.78	□□□□□ -1
UBS1	YBR165W	ISF1	P32488	338 aa		8.77	□□□□□ -1.01
UBS1	YBR165W	YJR115W	P47152	169 aa		8.76	□□□□□ -1.01
UBS1	YBR165W	RPL34B	P40525	121 aa	Known RBP	8.74	□□□□□ -1.01
UBS1	YBR165W	ATG20	Q07528	640 aa		8.74	□□□□□ -1.01
UBS1	YBR165W	FBP26	P32604	452 aa		8.73	□□□□□ -1.01
UBS1	YBR165W	MKS1	P34072	584 aa		8.73	□□□□□ -1.01
UBS1	YBR165W	MRX10	Q05648	414 aa		8.73	□□□□□ -1.01
UBS1	YBR165W	UTP13	Q05946	817 aa	Known RBP	8.73	□□□□□ -1.01
UBS1	YBR165W	RTG2	P32608	588 aa	Known RBP	8.72	□□□□□ -1.01
UBS1	YBR165W	PTK2	P47116	818 aa	Known RBP	8.72	□□□□□ -1.01
UBS1	YBR165W	ATG3	P40344	310 aa		8.71	□□□□□ -1.02
UBS1	YBR165W	STE6	P12866	1290 aa		8.7	□□□□□ -1.02
UBS1	YBR165W	RDS2	P19541	446 aa	Known RBP	8.7	□□□□□ -1.02
UBS1	YBR165W	ENO1	P00924	437 aa	Known RBP	8.69	□□□□□ -1.02
UBS1	YBR165W	ISU1	Q03020	165 aa		8.69	□□□□□ -1.02
UBS1	YBR165W	DFG5	Q05031	458 aa		8.68	□□□□□ -1.02
UBS1	YBR165W	ARG82	P07250	355 aa		8.67	□□□□□ -1.02
UBS1	YBR165W	AAD14	P42884	376 aa		8.67	□□□□□ -1.02
UBS1	YBR165W	ISR1	Q06098	443 aa	Known RBP	8.67	□□□□□ -1.02
UBS1	YBR165W	SRF1	Q12516	437 aa		8.67	□□□□□ -1.02
UBS1	YBR165W	MET22	P32179	357 aa		8.66	□□□□□ -1.02
UBS1	YBR165W	NUP85	P46673	744 aa		8.66	□□□□□ -1.02
UBS1	YBR165W	BDS1	Q08347	646 aa		8.66	□□□□□ -1.02
UBS1	YBR165W	ENV9	Q08651	330 aa		8.65	□□□□□ -1.02
UBS1	YBR165W	SOH1	P38633	127 aa		8.64	□□□□□ -1.03
UBS1	YBR165W	HAL5	P38970	855 aa	Known RBP	8.64	□□□□□ -1.03
UBS1	YBR165W	YPR204W	Q08995	1032 aa		8.64	□□□□□ -1.03
UBS1	YBR165W	PEP12	P32854	288 aa		8.63	□□□□□ -1.03
UBS1	YBR165W	SPT2	P06843	333 aa	Predicted RBP	8.62	□□□□□ -1.03
UBS1	YBR165W	RPP2B	P02400	110 aa	Known RBP	8.61	□□□□□ -1.03
UBS1	YBR165W	SIS2	P36024	562 aa		8.61	□□□□□ -1.03
UBS1	YBR165W	LCB5	Q06147	687 aa	Known RBP	8.61	□□□□□ -1.03
UBS1	YBR165W	YDR444W	Q04093	687 aa		8.6	□□□□□ -1.03
UBS1	YBR165W	LSC2	P53312	427 aa		8.58	□□□□□ -1.04
UBS1	YBR165W	YLR346C	Q06139	101 aa		8.58	□□□□□ -1.04
UBS1	YBR165W	HDA3	Q06623	655 aa		8.58	□□□□□ -1.04
UBS1	YBR165W	UTR2	P32623	467 aa		8.57	□□□□□ -1.04
UBS1	YBR165W	OPT2	Q06593	877 aa		8.57	□□□□□ -1.04
UBS1	YBR165W	YJR098C	P47139	656 aa		8.56	□□□□□ -1.04
UBS1	YBR165W	DLD1	P32891	587 aa		8.55	□□□□□ -1.04
UBS1	YBR165W	TTI1	P36097	1038 aa		8.55	□□□□□ -1.04
UBS1	YBR165W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	8.55	□□□□□ -1.04	not detected
UBS1	YBR165W	WTM2	Q12206	467 aa		8.55	□□□□□ -1.04
UBS1	YBR165W	RLF2	Q12495	606 aa		8.55	□□□□□ -1.04
UBS1	YBR165W	GLY1	P37303	387 aa	Known RBP	8.54	□□□□□ -1.04
UBS1	YBR165W	MIP1	P15801	1254 aa		8.53	□□□□□ -1.04
UBS1	YBR165W	DLD3	P39976	496 aa	Known RBP	8.53	□□□□□ -1.04
UBS1	YBR165W	SLX8	P40072	274 aa		8.53	□□□□□ -1.04
UBS1	YBR165W	DAT1	P13483	248 aa	Known RBP	8.52	□□□□□ -1.05
UBS1	YBR165W	TBS1	P38114	1094 aa		8.52	□□□□□ -1.05
UBS1	YBR165W	GAR1	P28007	205 aa	Known RBP	8.51	□□□□□ -1.05
UBS1	YBR165W	YFL034W	P43564	1073 aa		8.51	□□□□□ -1.05
UBS1	YBR165W	VTC4	P47075	721 aa		8.51	□□□□□ -1.05
UBS1	YBR165W	UBP2	Q01476	1272 aa		8.51	□□□□□ -1.05
UBS1	YBR165W	TSC13	Q99190	310 aa		8.51	□□□□□ -1.05
UBS1	YBR165W	AIM9	P40053	627 aa	Known RBP	8.5	□□□□□ -1.05
UBS1	YBR165W	TY1A-BL	Q12266	440 aa		8.49	□□□□□ -1.05
UBS1	YBR165W	TCB1	Q12466	1186 aa		8.49	□□□□□ -1.05
UBS1	YBR165W	SCW11	P53189	542 aa		8.48	□□□□□ -1.05
UBS1	YBR165W	PHO87	P25360	923 aa		8.47	□□□□□ -1.05
UBS1	YBR165W	DAL1	P32375	460 aa		8.47	□□□□□ -1.05
UBS1	YBR165W	TGL4	P36165	910 aa		8.47	□□□□□ -1.05
UBS1	YBR165W	ACO2	P39533	789 aa		8.47	□□□□□ -1.05
UBS1	YBR165W	SUM1	P46676	1062 aa		8.47	□□□□□ -1.05
UBS1	YBR165W	SWI5	P08153	709 aa		8.46	□□□□□ -1.06
UBS1	YBR165W	SSN3	P39073	555 aa		8.46	□□□□□ -1.06
UBS1	YBR165W	KTR7	P40504	517 aa		8.46	□□□□□ -1.06
UBS1	YBR165W	MSN5	P52918	1224 aa		8.46	□□□□□ -1.06
UBS1	YBR165W	GAL2	P13181	574 aa		8.45	□□□□□ -1.06
UBS1	YBR165W	PDI1	P17967	522 aa	Known RBP	8.45	□□□□□ -1.06

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms