RNA–Protein interactions for RNA: YBL053W

YBL053W, Transcript of Dubious open reading frame, yeast

Gene YBL053W, Length 375 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBL053W	YBL053W	YPR053C	Q6Q5F3	151 aa		4.42	□□□□□ -1.7
YBL053W	YBL053W	YFL066C	P43538	392 aa		4.41	□□□□□ -1.7
YBL053W	YBL053W	SIT4	P20604	311 aa		4.4	□□□□□ -1.71
YBL053W	YBL053W	TBF1	Q02457	562 aa		4.4	□□□□□ -1.71
YBL053W	YBL053W	YDL206W	Q12424	762 aa		4.4	□□□□□ -1.71
YBL053W	YBL053W	SLY41	P22215	453 aa		4.39	□□□□□ -1.71
YBL053W	YBL053W	RPA14	P50106	137 aa		4.38	□□□□□ -1.71
YBL053W	YBL053W	YBL086C	P38177	466 aa		4.37	□□□□□ -1.71
YBL053W	YBL053W	YPR097W	Q06839	1073 aa		4.37	□□□□□ -1.71
YBL053W	YBL053W	NIS1	P53939	407 aa		4.34	□□□□□ -1.71
YBL053W	YBL053W	SKN7	P38889	622 aa		4.33	□□□□□ -1.72
YBL053W	YBL053W	TEA1	P47988	759 aa		4.33	□□□□□ -1.72
YBL053W	YBL053W	PUS6	P53294	404 aa		4.33	□□□□□ -1.72
YBL053W	YBL053W	NAM8	Q00539	523 aa	Known RBP	4.33	□□□□□ -1.72
YBL053W	YBL053W	YMR187C	Q03236	431 aa		4.33	□□□□□ -1.72
YBL053W	YBL053W	APP1	P53933	587 aa		4.31	□□□□□ -1.72
YBL053W	YBL053W	TDA6	Q06466	467 aa		4.31	□□□□□ -1.72
YBL053W	YBL053W	SBE2	P42223	864 aa	Known RBP	4.3	□□□□□ -1.72
YBL053W	YBL053W	CUZ1	P53899	274 aa		4.3	□□□□□ -1.72
YBL053W	YBL053W	CEM1	P39525	442 aa		4.29	□□□□□ -1.72
YBL053W	YBL053W	YMR196W	Q04336	1088 aa		4.29	□□□□□ -1.72
YBL053W	YBL053W	GLT1	Q12680	2145 aa	Known RBP	4.28	□□□□□ -1.72
YBL053W	YBL053W	CDC19	P00549	500 aa	Known RBP	4.28	□□□□□ -1.72
YBL053W	YBL053W	VAC17	P25591	423 aa		4.27	□□□□□ -1.73
YBL053W	YBL053W	ADE12	P80210	433 aa	Known RBP	4.27	□□□□□ -1.73
YBL053W	YBL053W	ITT1	Q04638	464 aa		4.27	□□□□□ -1.73
YBL053W	YBL053W	TRM1	P15565	570 aa	Known RBP	4.26	□□□□□ -1.73
YBL053W	YBL053W	FPK1	P53739	893 aa		4.26	□□□□□ -1.73
YBL053W	YBL053W	PBS2	P08018	668 aa		4.25	□□□□□ -1.73
YBL053W	YBL053W	MAC1	P35192	417 aa		4.23	□□□□□ -1.73
YBL053W	YBL053W	EMW1	P42842	904 aa	Known RBP	4.23	□□□□□ -1.73
YBL053W	YBL053W	YNR014W	P53719	212 aa		4.23	□□□□□ -1.73
YBL053W	YBL053W	DFG5	Q05031	458 aa		4.23	□□□□□ -1.73
YBL053W	YBL053W	MKS1	P34072	584 aa		4.21	□□□□□ -1.74
YBL053W	YBL053W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YBL053W	YBL053W	SCJ1	P25303	377 aa		4.2	□□□□□ -1.74
YBL053W	YBL053W	BDS1	Q08347	646 aa		4.2	□□□□□ -1.74
YBL053W	YBL053W	MAM3	Q12296	706 aa		4.2	□□□□□ -1.74
YBL053W	YBL053W	AMN1	P38285	549 aa	Predicted RBP	4.19	□□□□□ -1.74
YBL053W	YBL053W	YMR265C	Q03508	461 aa	Known RBP	4.19	□□□□□ -1.74
YBL053W	YBL053W	SYT1	Q06836	1226 aa		4.19	□□□□□ -1.74
YBL053W	YBL053W	YCK2	P23292	546 aa	Known RBP	4.18	□□□□□ -1.74
YBL053W	YBL053W	IRC24	P40580	263 aa		4.18	□□□□□ -1.74
YBL053W	YBL053W	MCX1	P38323	520 aa	Predicted RBP	4.17	□□□□□ -1.74
YBL053W	YBL053W	VTC4	P47075	721 aa		4.17	□□□□□ -1.74
YBL053W	YBL053W	IES2	P40154	320 aa		4.16	□□□□□ -1.74
YBL053W	YBL053W	LSB6	P42951	607 aa		4.16	□□□□□ -1.74
YBL053W	YBL053W	KRE33	P53914	1056 aa	Known RBP	4.16	□□□□□ -1.74
YBL053W	YBL053W	MCA1	Q08601	432 aa		4.16	□□□□□ -1.74
YBL053W	YBL053W	DIT1	P21623	536 aa		4.15	□□□□□ -1.75
YBL053W	YBL053W	SLN1	P39928	1220 aa	Predicted RBP	4.15	□□□□□ -1.75
YBL053W	YBL053W	BOI2	P39969	1040 aa		4.14	□□□□□ -1.75
YBL053W	YBL053W	YDR215C	Q12240	137 aa		4.14	□□□□□ -1.75
YBL053W	YBL053W	DAL1	P32375	460 aa		4.13	□□□□□ -1.75
YBL053W	YBL053W	YPL034W	Q03083	165 aa		4.13	□□□□□ -1.75
YBL053W	YBL053W	MMP1	Q12372	583 aa		4.13	□□□□□ -1.75
YBL053W	YBL053W	CKB1	P43639	278 aa		4.12	□□□□□ -1.75
YBL053W	YBL053W	HST2	P53686	357 aa		4.12	□□□□□ -1.75
YBL053W	YBL053W	FBP26	P32604	452 aa		4.11	□□□□□ -1.75
YBL053W	YBL053W	TAT1	P38085	619 aa		4.11	□□□□□ -1.75
YBL053W	YBL053W	ALO1	P54783	526 aa	Known RBP	4.11	□□□□□ -1.75
YBL053W	YBL053W	YDR461C-A	Q2V2P7	80 aa		4.11	□□□□□ -1.75
YBL053W	YBL053W	UBP15	P50101	1230 aa		4.1	□□□□□ -1.75
YBL053W	YBL053W	STE6	P12866	1290 aa		4.08	□□□□□ -1.76
YBL053W	YBL053W	ESS1	P22696	170 aa		4.08	□□□□□ -1.76
YBL053W	YBL053W	NUP42	P49686	430 aa	Known RBP	4.08	□□□□□ -1.76
YBL053W	YBL053W	GPM1	P00950	247 aa	Known RBP	4.07	□□□□□ -1.76
YBL053W	YBL053W	GLN1	P32288	370 aa	Known RBP	4.07	□□□□□ -1.76
YBL053W	YBL053W	OMA1	P36163	345 aa		4.07	□□□□□ -1.76
YBL053W	YBL053W	YJU3	P28321	313 aa		4.06	□□□□□ -1.76
YBL053W	YBL053W	MET1	P36150	593 aa		4.06	□□□□□ -1.76
YBL053W	YBL053W	DLD3	P39976	496 aa	Known RBP	4.06	□□□□□ -1.76
YBL053W	YBL053W	FIG4	P42837	879 aa		4.05	□□□□□ -1.76
YBL053W	YBL053W	DIT2	P21595	489 aa		4.03	□□□□□ -1.76
YBL053W	YBL053W	FPS1	P23900	669 aa		4.02	□□□□□ -1.77
YBL053W	YBL053W	DSF2	P38213	736 aa		4.02	□□□□□ -1.77
YBL053W	YBL053W	PRY1	P47032	299 aa		4.02	□□□□□ -1.77
YBL053W	YBL053W	AVT1	P47082	602 aa		4.02	□□□□□ -1.77
YBL053W	YBL053W	INP52	P50942	1183 aa		4.01	□□□□□ -1.77
YBL053W	YBL053W	ISU1	Q03020	165 aa		4.01	□□□□□ -1.77
YBL053W	YBL053W	RPP2B	P02400	110 aa	Known RBP	4	□□□□□ -1.77
YBL053W	YBL053W	RSC30	P38781	883 aa		4	□□□□□ -1.77
YBL053W	YBL053W	NAF1	P53919	492 aa	Known RBP	4	□□□□□ -1.77
YBL053W	YBL053W	SLA1	P32790	1244 aa		3.99	□□□□□ -1.77
YBL053W	YBL053W	MSN5	P52918	1224 aa		3.99	□□□□□ -1.77
YBL053W	YBL053W	TEC1	P18412	486 aa		3.98	□□□□□ -1.77
YBL053W	YBL053W	AHP1	P38013	176 aa	Known RBP	3.98	□□□□□ -1.77
YBL053W	YBL053W	ATG20	Q07528	640 aa		3.98	□□□□□ -1.77
YBL053W	YBL053W	TY1A-DR3	Q12441	440 aa		3.98	□□□□□ -1.77
YBL053W	YBL053W	SSN3	P39073	555 aa		3.97	□□□□□ -1.77
YBL053W	YBL053W	ARG8	P18544	423 aa		3.96	□□□□□ -1.78
YBL053W	YBL053W	PDC5	P16467	563 aa	Known RBP	3.95	□□□□□ -1.78
YBL053W	YBL053W	KNS1	P32350	737 aa	Predicted RBP	3.95	□□□□□ -1.78
YBL053W	YBL053W	PKH3	Q03306	898 aa	Predicted RBP	3.95	□□□□□ -1.78
YBL053W	YBL053W	YPR084W	Q06821	456 aa		3.93	□□□□□ -1.78
YBL053W	YBL053W	MRPL16	P38064	232 aa		3.91	□□□□□ -1.78
YBL053W	YBL053W	ALA1	P40825	983 aa	Known RBP	3.9	□□□□□ -1.79
YBL053W	YBL053W	WTM2	Q12206	467 aa		3.9	□□□□□ -1.79
YBL053W	YBL053W	DAT1	P13483	248 aa	Known RBP	3.89	□□□□□ -1.79
YBL053W	YBL053W	ATF2	P53296	535 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms