RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	ATH1	P48016	1211 aa		8.13	□□□□□ -1.11
LDS1	YAL018C	MHP1	P43638	1398 aa		8.12	□□□□□ -1.11
LDS1	YAL018C	CPS1	P27614	576 aa		8.11	□□□□□ -1.11
LDS1	YAL018C	SOL3	P38858	249 aa		8.1	□□□□□ -1.11
LDS1	YAL018C	RCM1	P53972	490 aa		8.1	□□□□□ -1.11
LDS1	YAL018C	SEC3	P33332	1336 aa	Known RBP	8.08	□□□□□ -1.12
LDS1	YAL018C	CHL1	P22516	861 aa	Predicted RBP	8.08	□□□□□ -1.12
LDS1	YAL018C	PSK1	P31374	1356 aa		8.08	□□□□□ -1.12
LDS1	YAL018C	PDS5	Q04264	1277 aa		8.07	□□□□□ -1.12
LDS1	YAL018C	PPH3	P32345	308 aa		8.06	□□□□□ -1.12
LDS1	YAL018C	YDR344C	Q05510	147 aa		8.06	□□□□□ -1.12
LDS1	YAL018C	LEU2	P04173	364 aa	Predicted RBP	8.05	□□□□□ -1.12
LDS1	YAL018C	BCK2	P33306	851 aa		8.05	□□□□□ -1.12
LDS1	YAL018C	PRE3	P38624	215 aa		8.05	□□□□□ -1.12
LDS1	YAL018C	MTR4	P47047	1073 aa	Known RBP	8.05	□□□□□ -1.12
LDS1	YAL018C	RGA2	Q06407	1009 aa		8.04	□□□□□ -1.12
LDS1	YAL018C	ILV3	P39522	585 aa	Known RBP	8.03	□□□□□ -1.12
LDS1	YAL018C	PML39	Q03760	334 aa		8.03	□□□□□ -1.12
LDS1	YAL018C	NOP53	Q12080	455 aa	Known RBP	8.02	□□□□□ -1.13
LDS1	YAL018C	PRP43	P53131	767 aa	Known RBP	8	□□□□□ -1.13
LDS1	YAL018C	ADE6	P38972	1358 aa	Known RBP	7.99	□□□□□ -1.13
LDS1	YAL018C	MPH3	P0CE00	602 aa		7.99	□□□□□ -1.13
LDS1	YAL018C	AI4	P03878	556 aa		7.98	□□□□□ -1.13
LDS1	YAL018C	RTF1	P53064	558 aa		7.98	□□□□□ -1.13
LDS1	YAL018C	PDI1	P17967	522 aa	Known RBP	7.97	□□□□□ -1.13
LDS1	YAL018C	MID1	P41821	548 aa		7.97	□□□□□ -1.13
LDS1	YAL018C	USO1	P25386	1790 aa		7.97	□□□□□ -1.13
LDS1	YAL018C	GRX4	P32642	244 aa		7.96	□□□□□ -1.14
LDS1	YAL018C	YGR273C	P53329	174 aa		7.96	□□□□□ -1.14
LDS1	YAL018C	TAP42	Q04372	366 aa		7.96	□□□□□ -1.14
LDS1	YAL018C	CSE4	P36012	229 aa		7.95	□□□□□ -1.14
LDS1	YAL018C	YML133C	Q03099	1374 aa		7.95	□□□□□ -1.14
LDS1	YAL018C	YLL067C	Q07888	1374 aa		7.95	□□□□□ -1.14
LDS1	YAL018C	YLL066C	Q99208	1374 aa		7.95	□□□□□ -1.14
LDS1	YAL018C	PRP5	P21372	849 aa	Predicted RBP	7.94	□□□□□ -1.14
LDS1	YAL018C	PRP45	P28004	379 aa	Predicted RBP	7.94	□□□□□ -1.14
LDS1	YAL018C	ELP4	Q02884	456 aa	Known RBP	7.94	□□□□□ -1.14
LDS1	YAL018C	RPS24A	P0CX31	135 aa	Known RBP	7.93	□□□□□ -1.14
LDS1	YAL018C	RPS24B	P0CX32	135 aa	Known RBP	7.93	□□□□□ -1.14
LDS1	YAL018C	SPT7	P35177	1332 aa		7.93	□□□□□ -1.14
LDS1	YAL018C	IOC4	Q04213	475 aa		7.92	□□□□□ -1.14
LDS1	YAL018C	VRP1	P37370	817 aa		7.91	□□□□□ -1.14
LDS1	YAL018C	SET1	P38827	1080 aa	Known RBP	7.91	□□□□□ -1.14
LDS1	YAL018C	KAR2	P16474	682 aa	Known RBP	7.9	□□□□□ -1.14
LDS1	YAL018C	ENP1	P38333	483 aa	Known RBP	7.9	□□□□□ -1.14
LDS1	YAL018C	ENT1	Q12518	454 aa		7.9	□□□□□ -1.14
LDS1	YAL018C	ARH1	P48360	493 aa		7.89	□□□□□ -1.15
LDS1	YAL018C	SLM3	Q12093	417 aa		7.88	□□□□□ -1.15
LDS1	YAL018C	DPS1	P04802	557 aa	Known RBP	7.87	□□□□□ -1.15
LDS1	YAL018C	TCB1	Q12466	1186 aa		7.87	□□□□□ -1.15
LDS1	YAL018C	YEF3	P16521	1044 aa	Known RBP	7.86	□□□□□ -1.15
LDS1	YAL018C	MSB3	P48566	633 aa	Predicted RBP	7.86	□□□□□ -1.15
LDS1	YAL018C	APP1	P53933	587 aa		7.86	□□□□□ -1.15
LDS1	YAL018C	GAS4	Q08271	471 aa		7.86	□□□□□ -1.15
LDS1	YAL018C	ENV9	Q08651	330 aa		7.86	□□□□□ -1.15
LDS1	YAL018C	LEU3	P08638	886 aa		7.85	□□□□□ -1.15
LDS1	YAL018C	XDJ1	P39102	459 aa		7.85	□□□□□ -1.15
LDS1	YAL018C	SLI15	P38283	698 aa		7.84	□□□□□ -1.15
LDS1	YAL018C	PEX29	Q03370	554 aa		7.84	□□□□□ -1.15
LDS1	YAL018C	HIM1	Q06674	414 aa		7.84	□□□□□ -1.15
LDS1	YAL018C	PAP2	P53632	584 aa	Known RBP	7.83	□□□□□ -1.16
LDS1	YAL018C	MPC54	Q08550	464 aa		7.83	□□□□□ -1.16
LDS1	YAL018C	KEX1	P09620	729 aa		7.82	□□□□□ -1.16
LDS1	YAL018C	TRK1	P12685	1235 aa		7.82	□□□□□ -1.16
LDS1	YAL018C	IMH1	Q06704	911 aa	Known RBP	7.82	□□□□□ -1.16
LDS1	YAL018C	RPO41	P13433	1351 aa	Known RBP	7.82	□□□□□ -1.16
LDS1	YAL018C	AUS1	Q08409	1394 aa		7.82	□□□□□ -1.16
LDS1	YAL018C	RSF2	P46974	1380 aa		7.81	□□□□□ -1.16
LDS1	YAL018C	XKS1	P42826	600 aa		7.8	□□□□□ -1.16
LDS1	YAL018C	RPP0	P05317	312 aa	Known RBP	7.79	□□□□□ -1.16
LDS1	YAL018C	IES2	P40154	320 aa		7.79	□□□□□ -1.16
LDS1	YAL018C	CTF4	Q01454	927 aa		7.79	□□□□□ -1.16
LDS1	YAL018C	HAP5	Q02516	242 aa		7.79	□□□□□ -1.16
LDS1	YAL018C	YLR326W	Q06170	240 aa	Known RBP	7.79	□□□□□ -1.16
LDS1	YAL018C	MEC3	Q02574	474 aa		7.78	□□□□□ -1.16
LDS1	YAL018C	SPT23	P35210	1082 aa		7.77	□□□□□ -1.17
LDS1	YAL018C	UBP14	P38237	781 aa	Known RBP	7.77	□□□□□ -1.17
LDS1	YAL018C	RTR1	P40084	226 aa	Predicted RBP	7.77	□□□□□ -1.17
LDS1	YAL018C	AKL1	P38080	1108 aa	Known RBP	7.76	□□□□□ -1.17
LDS1	YAL018C	DSD1	P53095	428 aa		7.76	□□□□□ -1.17
LDS1	YAL018C	ROM2	P51862	1356 aa	Known RBP	7.75	□□□□□ -1.17
LDS1	YAL018C	VHR2	P40041	505 aa		7.75	□□□□□ -1.17
LDS1	YAL018C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.75	□□□□□ -1.17	not detected
LDS1	YAL018C	BNI4	P53858	892 aa		7.75	□□□□□ -1.17
LDS1	YAL018C	SIR4	P11978	1358 aa		7.74	□□□□□ -1.17
LDS1	YAL018C	YKL133C	P36066	463 aa		7.74	□□□□□ -1.17
LDS1	YAL018C	RRP46	P53256	223 aa	Predicted RBP	7.74	□□□□□ -1.17
LDS1	YAL018C	PRD1	P25375	712 aa		7.73	□□□□□ -1.17
LDS1	YAL018C	VPS27	P40343	622 aa	Known RBP	7.73	□□□□□ -1.17
LDS1	YAL018C	NMA111	P53920	997 aa		7.73	□□□□□ -1.17
LDS1	YAL018C	DPL1	Q05567	589 aa		7.73	□□□□□ -1.17
LDS1	YAL018C	YDL144C	Q07589	356 aa		7.73	□□□□□ -1.17
LDS1	YAL018C	MLP1	Q02455	1875 aa	Known RBP	7.72	□□□□□ -1.17
LDS1	YAL018C	HSP104	P31539	908 aa	Known RBP	7.72	□□□□□ -1.17
LDS1	YAL018C	AOS1	Q06624	347 aa		7.72	□□□□□ -1.17
LDS1	YAL018C	CDC45	Q08032	650 aa		7.72	□□□□□ -1.17
LDS1	YAL018C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
LDS1	YAL018C	YFR016C	P43597	1233 aa	Known RBP	7.71	□□□□□ -1.18
LDS1	YAL018C	YRB30	P53107	440 aa	Predicted RBP	7.71	□□□□□ -1.18
LDS1	YAL018C	YMR074C	Q04773	145 aa		7.71	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms