RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCR1	SCR1	HSP104	P31539	908 aa	Known RBP	19.23	■□□□□ 0.67
SCR1	SCR1	RIM15	P43565	1770 aa		19.22	■□□□□ 0.67
SCR1	SCR1	ALD3	P54114	506 aa		19.22	■□□□□ 0.67
SCR1	SCR1	RAD4	P14736	754 aa		19.2	■□□□□ 0.66
SCR1	SCR1	TRK1	P12685	1235 aa		19.19	■□□□□ 0.66
SCR1	SCR1	AKL1	P38080	1108 aa	Known RBP	19.19	■□□□□ 0.66
SCR1	SCR1	YBP2	P53169	641 aa		19.18	■□□□□ 0.66
SCR1	SCR1	BUG1	Q12191	341 aa		19.18	■□□□□ 0.66
SCR1	SCR1	RPG1	P38249	964 aa	Known RBP	19.16	■□□□□ 0.66
SCR1	SCR1	NUP145	P49687	1317 aa		19.15	■□□□□ 0.66
SCR1	SCR1	NST1	P53935	1240 aa		19.14	■□□□□ 0.65
SCR1	SCR1	AOS1	Q06624	347 aa		19.14	■□□□□ 0.65
SCR1	SCR1	GRE2	Q12068	342 aa	Known RBP	19.14	■□□□□ 0.65
SCR1	SCR1	UTP22	P53254	1237 aa	Predicted RBP	19.12	■□□□□ 0.65
SCR1	SCR1	PSD2	P53037	1138 aa	Known RBP	19.1	■□□□□ 0.65
SCR1	SCR1	SSA1	P10591	642 aa	Known RBP	19.04	■□□□□ 0.64
SCR1	SCR1	KCC4	P25389	1037 aa		19.04	■□□□□ 0.64
SCR1	SCR1	IOC4	Q04213	475 aa		19.04	■□□□□ 0.64
SCR1	SCR1	NTH2	P35172	780 aa		19.02	■□□□□ 0.64
SCR1	SCR1	RMT2	Q03305	412 aa		19.02	■□□□□ 0.64
SCR1	SCR1	TOS1	P38288	455 aa		19	■□□□□ 0.63
SCR1	SCR1	SAP155	P43612	1002 aa		19	■□□□□ 0.63
SCR1	SCR1	TUM1	Q08686	304 aa	Known RBP	19	■□□□□ 0.63
SCR1	SCR1	MDG1	P53885	366 aa		18.99	■□□□□ 0.63
SCR1	SCR1	RRP46	P53256	223 aa	Predicted RBP	18.98	■□□□□ 0.63
SCR1	SCR1	HPC2	Q01448	625 aa		18.98	■□□□□ 0.63
SCR1	SCR1	UGA3	P26370	528 aa		18.95	■□□□□ 0.62
SCR1	SCR1	RTR1	P40084	226 aa	Predicted RBP	18.94	■□□□□ 0.62
SCR1	SCR1	YNL050C	P53952	270 aa		18.94	■□□□□ 0.62
SCR1	SCR1	NOP53	Q12080	455 aa	Known RBP	18.93	■□□□□ 0.62
SCR1	SCR1	RRT14	P40470	206 aa		18.92	■□□□□ 0.62
SCR1	SCR1	NSE3	Q05541	303 aa		18.92	■□□□□ 0.62
SCR1	SCR1	ALE1	Q08548	619 aa		18.91	■□□□□ 0.62
SCR1	SCR1	NYV1	Q12255	253 aa		18.91	■□□□□ 0.62
SCR1	SCR1	PRD1	P25375	712 aa		18.88	■□□□□ 0.61
SCR1	SCR1	TEA1	P47988	759 aa		18.88	■□□□□ 0.61
SCR1	SCR1	PHM7	Q12252	991 aa		18.88	■□□□□ 0.61
SCR1	SCR1	BUD27	P43573	796 aa	Known RBP RIP-Chip data	18.87	■□□□□ 0.61	not detected
SCR1	SCR1	MSN5	P52918	1224 aa		18.86	■□□□□ 0.61
SCR1	SCR1	SSP2	Q08646	371 aa		18.86	■□□□□ 0.61
SCR1	SCR1	EAF6	P47128	113 aa		18.84	■□□□□ 0.61
SCR1	SCR1	MAM1	P40065	302 aa		18.83	■□□□□ 0.6
SCR1	SCR1	YFR016C	P43597	1233 aa	Known RBP	18.83	■□□□□ 0.6
SCR1	SCR1	ZDS1	P50111	915 aa	Known RBP	18.83	■□□□□ 0.6
SCR1	SCR1	YKL222C	P35995	705 aa		18.82	■□□□□ 0.6
SCR1	SCR1	RIX7	Q07844	837 aa	Known RBP	18.82	■□□□□ 0.6
SCR1	SCR1	LYS2	P07702	1392 aa		18.81	■□□□□ 0.6
SCR1	SCR1	CTT1	P06115	562 aa		18.81	■□□□□ 0.6
SCR1	SCR1	SER1	P33330	395 aa	Known RBP	18.81	■□□□□ 0.6
SCR1	SCR1	LPD1	P09624	499 aa	Known RBP	18.78	■□□□□ 0.6
SCR1	SCR1	CTI6	Q08923	506 aa		18.77	■□□□□ 0.6
SCR1	SCR1	ERT1	P38140	529 aa		18.76	■□□□□ 0.59
SCR1	SCR1	RAT1	Q02792	1006 aa	Known RBP	18.76	■□□□□ 0.59
SCR1	SCR1	YER156C	P40093	338 aa	Known RBP	18.74	■□□□□ 0.59
SCR1	SCR1	UTP10	P42945	1769 aa	Known RBP	18.73	■□□□□ 0.59
SCR1	SCR1	YGL082W	P53155	381 aa		18.73	■□□□□ 0.59
SCR1	SCR1	THI22	Q06490	572 aa		18.72	■□□□□ 0.59
SCR1	SCR1	PFF1	P38244	976 aa		18.71	■□□□□ 0.59
SCR1	SCR1	MPP10	P47083	593 aa	Known RBP	18.71	■□□□□ 0.59
SCR1	SCR1	DIB1	Q06819	143 aa	Predicted RBP	18.71	■□□□□ 0.59
SCR1	SCR1	BMS1	Q08965	1183 aa	Known RBP	18.71	■□□□□ 0.59
SCR1	SCR1	GYP7	P48365	746 aa		18.69	■□□□□ 0.58
SCR1	SCR1	CWH41	P53008	833 aa		18.69	■□□□□ 0.58
SCR1	SCR1	YDL144C	Q07589	356 aa		18.69	■□□□□ 0.58
SCR1	SCR1	COQ4	O13525	335 aa		18.67	■□□□□ 0.58
SCR1	SCR1	RTT109	Q07794	436 aa		18.65	■□□□□ 0.58
SCR1	SCR1	ARG8	P18544	423 aa		18.64	■□□□□ 0.57
SCR1	SCR1	KIN4	Q01919	800 aa		18.64	■□□□□ 0.57
SCR1	SCR1	BDF2	Q07442	638 aa		18.64	■□□□□ 0.57
SCR1	SCR1	IRC3	Q06683	689 aa		18.63	■□□□□ 0.57
SCR1	SCR1	YOL057W	Q08225	711 aa		18.61	■□□□□ 0.57
SCR1	SCR1	YPR204W	Q08995	1032 aa		18.61	■□□□□ 0.57
SCR1	SCR1	RPP0	P05317	312 aa	Known RBP	18.6	■□□□□ 0.57
SCR1	SCR1	YBR287W	P38355	427 aa		18.6	■□□□□ 0.57
SCR1	SCR1	VPS64	Q03944	604 aa		18.6	■□□□□ 0.57
SCR1	SCR1	TPD3	P31383	635 aa		18.59	■□□□□ 0.57
SCR1	SCR1	SMY1	P32364	656 aa	Known RBP	18.58	■□□□□ 0.56
SCR1	SCR1	APL2	P36000	726 aa	Predicted RBP	18.58	■□□□□ 0.56
SCR1	SCR1	HEF3	P53978	1044 aa	Known RBP	18.58	■□□□□ 0.56
SCR1	SCR1	ERO1	Q03103	563 aa		18.58	■□□□□ 0.56
SCR1	SCR1	SSK22	P25390	1331 aa	Predicted RBP	18.57	■□□□□ 0.56
SCR1	SCR1	RPS9B	P05755	195 aa	Known RBP	18.57	■□□□□ 0.56
SCR1	SCR1	DNM1	P54861	757 aa		18.57	■□□□□ 0.56
SCR1	SCR1	HAT1	Q12341	374 aa		18.57	■□□□□ 0.56
SCR1	SCR1	DCD1	P06773	312 aa		18.56	■□□□□ 0.56
SCR1	SCR1	ZDS2	P54786	942 aa		18.56	■□□□□ 0.56
SCR1	SCR1	SIT4	P20604	311 aa		18.55	■□□□□ 0.56
SCR1	SCR1	SQS1	P53866	767 aa	Known RBP	18.54	■□□□□ 0.56
SCR1	SCR1	YLR271W	Q06152	274 aa		18.54	■□□□□ 0.56
SCR1	SCR1	SRT1	Q03175	343 aa		18.51	■□□□□ 0.55
SCR1	SCR1	PKH1	Q03407	766 aa		18.5	■□□□□ 0.55
SCR1	SCR1	CST6	P40535	587 aa		18.49	■□□□□ 0.55
SCR1	SCR1	FPK1	P53739	893 aa		18.49	■□□□□ 0.55
SCR1	SCR1	VPS27	P40343	622 aa	Known RBP	18.48	■□□□□ 0.55
SCR1	SCR1	SYF1	Q04048	859 aa	Predicted RBP	18.48	■□□□□ 0.55
SCR1	SCR1	GRX6	Q12438	231 aa		18.47	■□□□□ 0.55
SCR1	SCR1	YJR008W	P47085	338 aa		18.45	■□□□□ 0.54
SCR1	SCR1	SAS4	Q04003	481 aa		18.45	■□□□□ 0.54
SCR1	SCR1	YDR306C	Q06640	478 aa		18.45	■□□□□ 0.54
SCR1	SCR1	YKU70	P32807	602 aa		18.44	■□□□□ 0.54

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms