RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
RGPD1-206ENST00000641458 KIAA1210Q9ULL0 1709 aa9.43□□□□□ -0.9
RGPD1-206ENST00000641458 EHMT2Q96KQ7 1210 aa9.43□□□□□ -0.9
RGPD1-206ENST00000641458 ADAMTSL3P82987 1691 aa9.43□□□□□ -0.9
RGPD1-206ENST00000641458 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
RGPD1-206ENST00000641458 ABCC3O15438 1527 aa9.41□□□□□ -0.9
RGPD1-206ENST00000641458 KIF15Q9NS87 1388 aa9.41□□□□□ -0.9
RGPD1-206ENST00000641458 CYB5RLQ6IPT4 315 aa9.41□□□□□ -0.9
RGPD1-206ENST00000641458 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
RGPD1-206ENST00000641458 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
RGPD1-206ENST00000641458 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
RGPD1-206ENST00000641458 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
RGPD1-206ENST00000641458 ZNF142P52746 1687 aaPredicted RBP9.38□□□□□ -0.91
RGPD1-206ENST00000641458 MADDQ8WXG6 1647 aa9.38□□□□□ -0.91
RGPD1-206ENST00000641458 NOS1P29475 1434 aa9.38□□□□□ -0.91
RGPD1-206ENST00000641458 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
RGPD1-206ENST00000641458 PLA2R1Q13018 1463 aa9.36□□□□□ -0.91
RGPD1-206ENST00000641458 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
RGPD1-206ENST00000641458 NRXN1Q9ULB1 1477 aa9.35□□□□□ -0.91
RGPD1-206ENST00000641458 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
RGPD1-206ENST00000641458 KIF1BO60333 1816 aa9.35□□□□□ -0.91
RGPD1-206ENST00000641458 ADGRB3O60242 1522 aa9.34□□□□□ -0.91
RGPD1-206ENST00000641458 PPLO60437 1756 aa9.34□□□□□ -0.91
RGPD1-206ENST00000641458 SYNMO15061 1565 aa9.34□□□□□ -0.91
RGPD1-206ENST00000641458 UGGT1Q9NYU2 1555 aa9.34□□□□□ -0.91
RGPD1-206ENST00000641458 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
RGPD1-206ENST00000641458 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
RGPD1-206ENST00000641458 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
RGPD1-206ENST00000641458 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
RGPD1-206ENST00000641458 FER1L4A9Z1Z3 1794 aa9.33□□□□□ -0.92
RGPD1-206ENST00000641458 YEATS2Q9ULM3 1422 aa9.33□□□□□ -0.92
RGPD1-206ENST00000641458 CLTCL1P53675 1640 aa9.32□□□□□ -0.92
RGPD1-206ENST00000641458 PRAG1Q86YV5 1406 aa9.32□□□□□ -0.92
RGPD1-206ENST00000641458 C3P01024 1663 aa9.32□□□□□ -0.92
RGPD1-206ENST00000641458 TMEM131LA2VDJ0 1609 aa9.31□□□□□ -0.92
RGPD1-206ENST00000641458 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
RGPD1-206ENST00000641458 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
RGPD1-206ENST00000641458 MYOM2P54296 1465 aa9.31□□□□□ -0.92
RGPD1-206ENST00000641458 SETD1AO15047 1707 aaKnown RBP9.31□□□□□ -0.92
RGPD1-206ENST00000641458 CLTCQ00610 1675 aaKnown RBP9.31□□□□□ -0.92
RGPD1-206ENST00000641458 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
RGPD1-206ENST00000641458 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
RGPD1-206ENST00000641458 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
RGPD1-206ENST00000641458 NPATQ14207 1427 aa9.3□□□□□ -0.92
RGPD1-206ENST00000641458 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
RGPD1-206ENST00000641458 MYO3AQ8NEV4 1616 aa9.29□□□□□ -0.92
RGPD1-206ENST00000641458 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
RGPD1-206ENST00000641458 TRPM1Q7Z4N2 1603 aa9.29□□□□□ -0.92
RGPD1-206ENST00000641458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.28□□□□□ -0.92
RGPD1-206ENST00000641458 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
RGPD1-206ENST00000641458 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
RGPD1-206ENST00000641458 UBR1Q8IWV7 1749 aa9.27□□□□□ -0.92
RGPD1-206ENST00000641458 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
RGPD1-206ENST00000641458 PCGF6Q9BYE7 350 aa9.27□□□□□ -0.93
RGPD1-206ENST00000641458 AFAP1Q8N556 730 aa9.27□□□□□ -0.93
RGPD1-206ENST00000641458 ERVK-7P63135 1459 aa9.26□□□□□ -0.93
RGPD1-206ENST00000641458 FAM50AQ14320 339 aaKnown RBP9.26□□□□□ -0.93
RGPD1-206ENST00000641458 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
RGPD1-206ENST00000641458 KNDC1Q76NI1 1749 aa9.26□□□□□ -0.93
RGPD1-206ENST00000641458 SLIT1O75093 1534 aa9.24□□□□□ -0.93
RGPD1-206ENST00000641458 SETD1BQ9UPS6 1966 aaKnown RBP9.24□□□□□ -0.93
RGPD1-206ENST00000641458 NEXMIFQ5QGS0 1516 aa9.24□□□□□ -0.93
RGPD1-206ENST00000641458 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
RGPD1-206ENST00000641458 ARHGAP23Q9P227 1491 aa9.23□□□□□ -0.93
RGPD1-206ENST00000641458 MYO5BQ9ULV0 1848 aa9.23□□□□□ -0.93
RGPD1-206ENST00000641458 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
RGPD1-206ENST00000641458 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
RGPD1-206ENST00000641458 KANK1Q14678 1352 aa9.22□□□□□ -0.93
RGPD1-206ENST00000641458 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
RGPD1-206ENST00000641458 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.93
RGPD1-206ENST00000641458 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.93
RGPD1-206ENST00000641458 DIP2AQ14689 1571 aa9.21□□□□□ -0.94
RGPD1-206ENST00000641458 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.94
RGPD1-206ENST00000641458 NUP155O75694 1391 aa9.2□□□□□ -0.94
RGPD1-206ENST00000641458 MED14O60244 1454 aa9.18□□□□□ -0.94
RGPD1-206ENST00000641458 RAPGEF3O95398 923 aa9.18□□□□□ -0.94
RGPD1-206ENST00000641458 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
RGPD1-206ENST00000641458 ADGRB1O14514 1584 aa9.17□□□□□ -0.94
RGPD1-206ENST00000641458 TTBK1Q5TCY1 1321 aaPredicted RBP9.17□□□□□ -0.94
RGPD1-206ENST00000641458 RIMS1Q86UR5 1692 aaKnown RBP9.17□□□□□ -0.94
RGPD1-206ENST00000641458 RPGRIP1LQ68CZ1 1315 aa9.17□□□□□ -0.94
RGPD1-206ENST00000641458 DLC1Q96QB1 1528 aa9.16□□□□□ -0.94
RGPD1-206ENST00000641458 ZNF777Q9ULD5 760 aaPredicted RBP9.16□□□□□ -0.94
RGPD1-206ENST00000641458 A2ML1A8K2U0 1454 aa9.15□□□□□ -0.95
RGPD1-206ENST00000641458 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
RGPD1-206ENST00000641458 SLC52A1Q9NWF4 448 aa9.14□□□□□ -0.95
RGPD1-206ENST00000641458 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
RGPD1-206ENST00000641458 CEP170BQ9Y4F5 1589 aaPredicted RBP9.13□□□□□ -0.95
RGPD1-206ENST00000641458 NWD1Q149M9 1564 aa9.13□□□□□ -0.95
RGPD1-206ENST00000641458 ARHGEF28Q8N1W1 1705 aaKnown RBP9.13□□□□□ -0.95
RGPD1-206ENST00000641458 XRN1Q8IZH2 1706 aaKnown RBP9.13□□□□□ -0.95
RGPD1-206ENST00000641458 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
RGPD1-206ENST00000641458 ADGRB2O60241 1585 aa9.12□□□□□ -0.95
RGPD1-206ENST00000641458 TECPR2O15040 1411 aa9.12□□□□□ -0.95
RGPD1-206ENST00000641458 CHIC2Q9UKJ5 165 aa9.12□□□□□ -0.95
RGPD1-206ENST00000641458 PPP1R15AO75807 674 aaPredicted RBP9.11□□□□□ -0.95
RGPD1-206ENST00000641458 CPS1P31327 1500 aa9.11□□□□□ -0.95
RGPD1-206ENST00000641458 ZMYM3Q14202 1370 aa9.11□□□□□ -0.95
RGPD1-206ENST00000641458 ASXL1Q8IXJ9 1541 aa9.11□□□□□ -0.95
RGPD1-206ENST00000641458 PKD2Q13563 968 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms