RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
SP3-208ENST00000640958 KDM5CP41229 1560 aa28.62■■■□□ 2.17
SP3-208ENST00000640958 DEPDC5O75140 1603 aa28.62■■■□□ 2.17
SP3-208ENST00000640958 CCDC144AA2RUR9 1427 aa28.61■■■□□ 2.17
SP3-208ENST00000640958 ATP10AO60312 1499 aa28.6■■■□□ 2.17
SP3-208ENST00000640958 C11orf95C9JLR9 678 aaPredicted RBP28.59■■■□□ 2.17
SP3-208ENST00000640958 SCAPERQ9BY12 1400 aa28.59■■■□□ 2.17
SP3-208ENST00000640958 CNTLNQ9NXG0 1405 aa28.59■■■□□ 2.17
SP3-208ENST00000640958 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
SP3-208ENST00000640958 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
SP3-208ENST00000640958 USP47Q96K76 1375 aa28.55■■■□□ 2.16
SP3-208ENST00000640958 BCORL1Q5H9F3 1711 aa28.54■■■□□ 2.16
SP3-208ENST00000640958 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
SP3-208ENST00000640958 E9PCH4 1651 aa28.53■■■□□ 2.16
SP3-208ENST00000640958 EIF2AK4Q9P2K8 1649 aaKnown RBP28.53■■■□□ 2.16
SP3-208ENST00000640958 KIDINS220Q9ULH0 1771 aa28.51■■■□□ 2.15
SP3-208ENST00000640958 KIF7Q2M1P5 1343 aa28.5■■■□□ 2.15
SP3-208ENST00000640958 VWDEQ8N2E2 1590 aa28.49■■■□□ 2.15
SP3-208ENST00000640958 TRPM1Q7Z4N2 1603 aa28.49■■■□□ 2.15
SP3-208ENST00000640958 DCAF11Q8TEB1 546 aa28.49■■■□□ 2.15
SP3-208ENST00000640958 A2MP01023 1474 aa28.48■■■□□ 2.15
SP3-208ENST00000640958 TET3O43151 1660 aa28.48■■■□□ 2.15
SP3-208ENST00000640958 PRAG1Q86YV5 1406 aa28.47■■■□□ 2.15
SP3-208ENST00000640958 CD109Q6YHK3 1445 aa28.46■■■□□ 2.15
SP3-208ENST00000640958 ZNF518AQ6AHZ1 1483 aa28.46■■■□□ 2.15
SP3-208ENST00000640958 KDM2AQ9Y2K7 1162 aa28.46■■■□□ 2.15
SP3-208ENST00000640958 MROH1Q8NDA8 1641 aa28.45■■■□□ 2.15
SP3-208ENST00000640958 SPHKAPQ2M3C7 1700 aa28.44■■■□□ 2.14
SP3-208ENST00000640958 PRDM15P57071 1507 aaPredicted RBP28.44■■■□□ 2.14
SP3-208ENST00000640958 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
SP3-208ENST00000640958 TRPM2O94759 1503 aa28.43■■■□□ 2.14
SP3-208ENST00000640958 CARD11Q9BXL7 1154 aa28.4■■■□□ 2.14
SP3-208ENST00000640958 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.14
SP3-208ENST00000640958 CEP152O94986 1710 aa28.39■■■□□ 2.13
SP3-208ENST00000640958 LAMC1P11047 1609 aa28.38■■■□□ 2.13
SP3-208ENST00000640958 PTPRTO14522 1441 aa28.38■■■□□ 2.13
SP3-208ENST00000640958 ROCK2O75116 1388 aaKnown RBP28.36■■■□□ 2.13
SP3-208ENST00000640958 KANK1Q14678 1352 aa28.36■■■□□ 2.13
SP3-208ENST00000640958 RGL3Q3MIN7 710 aa28.36■■■□□ 2.13
SP3-208ENST00000640958 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
SP3-208ENST00000640958 CLTCL1P53675 1640 aa28.35■■■□□ 2.13
SP3-208ENST00000640958 MYT1LQ9UL68 1186 aa28.34■■■□□ 2.13
SP3-208ENST00000640958 HECW2Q9P2P5 1572 aa28.34■■■□□ 2.13
SP3-208ENST00000640958 GPRASP1Q5JY77 1395 aa28.34■■■□□ 2.13
SP3-208ENST00000640958 RNF17Q9BXT8 1623 aaKnown RBP28.34■■■□□ 2.13
SP3-208ENST00000640958 KIF3BO15066 747 aa28.33■■■□□ 2.13
SP3-208ENST00000640958 MLH3Q9UHC1 1453 aa28.32■■■□□ 2.12
SP3-208ENST00000640958 NEO1Q92859 1461 aa28.32■■■□□ 2.12
SP3-208ENST00000640958 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
SP3-208ENST00000640958 RIMBP3CA6NJZ7 1639 aa28.28■■■□□ 2.12
SP3-208ENST00000640958 RIMBP3BA6NNM3 1639 aa28.28■■■□□ 2.12
SP3-208ENST00000640958 RIMBP3Q9UFD9 1639 aa28.28■■■□□ 2.12
SP3-208ENST00000640958 MAP3K4Q9Y6R4 1608 aa28.28■■■□□ 2.12
SP3-208ENST00000640958 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
SP3-208ENST00000640958 PRKRIP1Q9H875 184 aaPredicted RBP28.28■■■□□ 2.12
SP3-208ENST00000640958 ABCA6Q8N139 1617 aa28.27■■■□□ 2.12
SP3-208ENST00000640958 LMTK2Q8IWU2 1503 aa28.26■■■□□ 2.11
SP3-208ENST00000640958 MADDQ8WXG6 1647 aa28.26■■■□□ 2.11
SP3-208ENST00000640958 ST20-MTHFSA0A0A6YYL1 179 aa28.26■■■□□ 2.11
SP3-208ENST00000640958 PPRC1Q5VV67 1664 aaKnown RBP28.26■■■□□ 2.11
SP3-208ENST00000640958 NEURL4Q96JN8 1562 aa28.24■■■□□ 2.11
SP3-208ENST00000640958 NBPF1Q3BBV0 1214 aa28.22■■■□□ 2.11
SP3-208ENST00000640958 GLI2P10070 1586 aa28.22■■■□□ 2.11
SP3-208ENST00000640958 RICTORQ6R327 1708 aa28.2■■■□□ 2.11
SP3-208ENST00000640958 POLR3GLQ9BT43 218 aa28.16■■■□□ 2.1
SP3-208ENST00000640958 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
SP3-208ENST00000640958 KIF1BO60333 1816 aa28.15■■■□□ 2.1
SP3-208ENST00000640958 DIP2CQ9Y2E4 1556 aa28.15■■■□□ 2.1
SP3-208ENST00000640958 CCDC184Q52MB2 194 aa28.15■■■□□ 2.1
SP3-208ENST00000640958 UGGT1Q9NYU2 1555 aa28.14■■■□□ 2.1
SP3-208ENST00000640958 IQGAP1P46940 1657 aa28.13■■■□□ 2.09
SP3-208ENST00000640958 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
SP3-208ENST00000640958 STAC3Q96MF2 364 aa28.1■■■□□ 2.09
SP3-208ENST00000640958 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
SP3-208ENST00000640958 MROH2AA6NES4 1674 aa28.1■■■□□ 2.09
SP3-208ENST00000640958 RAPGEF3O95398 923 aa28.09■■■□□ 2.09
SP3-208ENST00000640958 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
SP3-208ENST00000640958 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
SP3-208ENST00000640958 ABCC3O15438 1527 aa28.07■■■□□ 2.08
SP3-208ENST00000640958 TESK2Q96S53 571 aa28.06■■■□□ 2.08
SP3-208ENST00000640958 MYOM2P54296 1465 aa28.05■■■□□ 2.08
SP3-208ENST00000640958 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
SP3-208ENST00000640958 NPATQ14207 1427 aa28.04■■■□□ 2.08
SP3-208ENST00000640958 CAMSAP1Q5T5Y3 1602 aa28.04■■■□□ 2.08
SP3-208ENST00000640958 ADGRB3O60242 1522 aa28.03■■■□□ 2.08
SP3-208ENST00000640958 HNRNPUQ00839 825 aaKnown RBP eCLIP28.02■■■□□ 2.08
SP3-208ENST00000640958 DISP3Q9P2K9 1392 aa28.02■■■□□ 2.08
SP3-208ENST00000640958 CFAP65Q6ZU64 1925 aaKnown RBP28.01■■■□□ 2.07
SP3-208ENST00000640958 SUPT16HQ9Y5B9 1047 aaKnown RBP28■■■□□ 2.07
SP3-208ENST00000640958 GGT6Q6P531 493 aa27.99■■■□□ 2.07
SP3-208ENST00000640958 ZMYM4Q5VZL5 1548 aa27.99■■■□□ 2.07
SP3-208ENST00000640958 SCAF11Q99590 1463 aaKnown RBP27.98■■■□□ 2.07
SP3-208ENST00000640958 YEATS2Q9ULM3 1422 aa27.97■■■□□ 2.07
SP3-208ENST00000640958 SIGLEC1Q9BZZ2 1709 aa27.97■■■□□ 2.07
SP3-208ENST00000640958 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
SP3-208ENST00000640958 NRXN1Q9ULB1 1477 aa27.95■■■□□ 2.06
SP3-208ENST00000640958 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
SP3-208ENST00000640958 FAM9BQ8IZU0 186 aa27.93■■■□□ 2.06
SP3-208ENST00000640958 KTN1Q86UP2 1357 aaKnown RBP27.93■■■□□ 2.06
SP3-208ENST00000640958 PPLO60437 1756 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms