RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 ADGRL1O94910 1474 aa13.14□□□□□ -0.31
PAX6-273ENST00000640610 TRAPPC8Q9Y2L5 1435 aa13.14□□□□□ -0.31
PAX6-273ENST00000640610 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
PAX6-273ENST00000640610 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
PAX6-273ENST00000640610 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 RPRD2Q5VT52 1461 aaKnown RBP13.12□□□□□ -0.31
PAX6-273ENST00000640610 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 TEX14Q8IWB6 1497 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 PZPP20742 1482 aa13.12□□□□□ -0.31
PAX6-273ENST00000640610 NEO1Q92859 1461 aa13.11□□□□□ -0.31
PAX6-273ENST00000640610 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
PAX6-273ENST00000640610 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
PAX6-273ENST00000640610 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
PAX6-273ENST00000640610 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
PAX6-273ENST00000640610 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
PAX6-273ENST00000640610 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
PAX6-273ENST00000640610 PKD2Q13563 968 aa13.06□□□□□ -0.32
PAX6-273ENST00000640610 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
PAX6-273ENST00000640610 POGZQ7Z3K3 1410 aa13.06□□□□□ -0.32
PAX6-273ENST00000640610 SPAG9O60271 1321 aaKnown RBP13.06□□□□□ -0.32
PAX6-273ENST00000640610 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
PAX6-273ENST00000640610 RICTORQ6R327 1708 aa13.06□□□□□ -0.32
PAX6-273ENST00000640610 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
PAX6-273ENST00000640610 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
PAX6-273ENST00000640610 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
PAX6-273ENST00000640610 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
PAX6-273ENST00000640610 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
PAX6-273ENST00000640610 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
PAX6-273ENST00000640610 KIF15Q9NS87 1388 aa13.05□□□□□ -0.32
PAX6-273ENST00000640610 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
PAX6-273ENST00000640610 KDM5CP41229 1560 aa13.04□□□□□ -0.32
PAX6-273ENST00000640610 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
PAX6-273ENST00000640610 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
PAX6-273ENST00000640610 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
PAX6-273ENST00000640610 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
PAX6-273ENST00000640610 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
PAX6-273ENST00000640610 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
PAX6-273ENST00000640610 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.32
PAX6-273ENST00000640610 FRMPD1Q5SYB0 1578 aa13.02□□□□□ -0.32
PAX6-273ENST00000640610 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
PAX6-273ENST00000640610 NUP155O75694 1391 aa13.01□□□□□ -0.33
PAX6-273ENST00000640610 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
PAX6-273ENST00000640610 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
PAX6-273ENST00000640610 DEKP35659 375 aaKnown RBP12.99□□□□□ -0.33
PAX6-273ENST00000640610 PPP4R2Q9NY27 417 aa12.99□□□□□ -0.33
PAX6-273ENST00000640610 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
PAX6-273ENST00000640610 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
PAX6-273ENST00000640610 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
PAX6-273ENST00000640610 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
PAX6-273ENST00000640610 ABCA6Q8N139 1617 aa12.97□□□□□ -0.33
PAX6-273ENST00000640610 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
PAX6-273ENST00000640610 FAM9BQ8IZU0 186 aa12.97□□□□□ -0.33
PAX6-273ENST00000640610 ZMYM4Q5VZL5 1548 aa12.96□□□□□ -0.34
PAX6-273ENST00000640610 USP47Q96K76 1375 aa12.96□□□□□ -0.34
PAX6-273ENST00000640610 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
PAX6-273ENST00000640610 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
PAX6-273ENST00000640610 BCORL1Q5H9F3 1711 aa12.94□□□□□ -0.34
PAX6-273ENST00000640610 YEATS2Q9ULM3 1422 aa12.94□□□□□ -0.34
PAX6-273ENST00000640610 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
PAX6-273ENST00000640610 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
PAX6-273ENST00000640610 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
PAX6-273ENST00000640610 UNC13BO14795 1591 aa12.92□□□□□ -0.34
PAX6-273ENST00000640610 A2MP01023 1474 aa12.92□□□□□ -0.34
PAX6-273ENST00000640610 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
PAX6-273ENST00000640610 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
PAX6-273ENST00000640610 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
PAX6-273ENST00000640610 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
PAX6-273ENST00000640610 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
PAX6-273ENST00000640610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
PAX6-273ENST00000640610 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.34
PAX6-273ENST00000640610 DEPDC5O75140 1603 aa12.9□□□□□ -0.34
PAX6-273ENST00000640610 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
PAX6-273ENST00000640610 KIF3BO15066 747 aa12.9□□□□□ -0.35
PAX6-273ENST00000640610 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
PAX6-273ENST00000640610 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 ATP10AO60312 1499 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 RALGAPBQ86X10 1494 aa12.87□□□□□ -0.35
PAX6-273ENST00000640610 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
PAX6-273ENST00000640610 ARHGEF40Q8TER5 1519 aa12.86□□□□□ -0.35
PAX6-273ENST00000640610 RNF17Q9BXT8 1623 aaKnown RBP12.86□□□□□ -0.35
PAX6-273ENST00000640610 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
PAX6-273ENST00000640610 PRDM15P57071 1507 aaPredicted RBP12.84□□□□□ -0.35
PAX6-273ENST00000640610 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
PAX6-273ENST00000640610 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
PAX6-273ENST00000640610 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
PAX6-273ENST00000640610 GGT6Q6P531 493 aa12.83□□□□□ -0.36
PAX6-273ENST00000640610 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
PAX6-273ENST00000640610 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
PAX6-273ENST00000640610 CEP152O94986 1710 aa12.82□□□□□ -0.36
PAX6-273ENST00000640610 NBPF1Q3BBV0 1214 aa12.82□□□□□ -0.36
PAX6-273ENST00000640610 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
PAX6-273ENST00000640610 KANK1Q14678 1352 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms