RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
PAX6-273ENST00000640610 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
PAX6-273ENST00000640610 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
PAX6-273ENST00000640610 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
PAX6-273ENST00000640610 ABCC9O60706 1549 aa17.11■□□□□ 0.33
PAX6-273ENST00000640610 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
PAX6-273ENST00000640610 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
PAX6-273ENST00000640610 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
PAX6-273ENST00000640610 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.29
PAX6-273ENST00000640610 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
PAX6-273ENST00000640610 NACADO15069 1562 aa16.68■□□□□ 0.26
PAX6-273ENST00000640610 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
PAX6-273ENST00000640610 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
PAX6-273ENST00000640610 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
PAX6-273ENST00000640610 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
PAX6-273ENST00000640610 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
PAX6-273ENST00000640610 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
PAX6-273ENST00000640610 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
PAX6-273ENST00000640610 HRCP23327 699 aa15.81■□□□□ 0.12
PAX6-273ENST00000640610 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
PAX6-273ENST00000640610 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
PAX6-273ENST00000640610 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
PAX6-273ENST00000640610 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
PAX6-273ENST00000640610 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
PAX6-273ENST00000640610 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
PAX6-273ENST00000640610 WIZO95785 1651 aa15.64■□□□□ 0.09
PAX6-273ENST00000640610 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PAX6-273ENST00000640610 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.07
PAX6-273ENST00000640610 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
PAX6-273ENST00000640610 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
PAX6-273ENST00000640610 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
PAX6-273ENST00000640610 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
PAX6-273ENST00000640610 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
PAX6-273ENST00000640610 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
PAX6-273ENST00000640610 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
PAX6-273ENST00000640610 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
PAX6-273ENST00000640610 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
PAX6-273ENST00000640610 PPARGC1BQ86YN6 1023 aaKnown RBP15.31■□□□□ 0.04
PAX6-273ENST00000640610 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
PAX6-273ENST00000640610 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
PAX6-273ENST00000640610 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
PAX6-273ENST00000640610 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
PAX6-273ENST00000640610 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
PAX6-273ENST00000640610 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
PAX6-273ENST00000640610 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ 0
PAX6-273ENST00000640610 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
PAX6-273ENST00000640610 CFTRP13569 1480 aa15.01□□□□□ -0.01
PAX6-273ENST00000640610 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
PAX6-273ENST00000640610 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
PAX6-273ENST00000640610 NESP48681 1621 aa14.96□□□□□ -0.01
PAX6-273ENST00000640610 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
PAX6-273ENST00000640610 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
PAX6-273ENST00000640610 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
PAX6-273ENST00000640610 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.04
PAX6-273ENST00000640610 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
PAX6-273ENST00000640610 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
PAX6-273ENST00000640610 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
PAX6-273ENST00000640610 MYT1Q01538 1121 aa14.79□□□□□ -0.04
PAX6-273ENST00000640610 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
PAX6-273ENST00000640610 SOGA1O94964 1423 aa14.77□□□□□ -0.04
PAX6-273ENST00000640610 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
PAX6-273ENST00000640610 CUX1P39880 1505 aa14.74□□□□□ -0.05
PAX6-273ENST00000640610 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
PAX6-273ENST00000640610 TOP2BQ02880 1626 aa14.72□□□□□ -0.05
PAX6-273ENST00000640610 BIVM-ERCC5R4GMW8 1640 aa14.72□□□□□ -0.05
PAX6-273ENST00000640610 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
PAX6-273ENST00000640610 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
PAX6-273ENST00000640610 DNMBPQ6XZF7 1577 aa14.66□□□□□ -0.06
PAX6-273ENST00000640610 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
PAX6-273ENST00000640610 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
PAX6-273ENST00000640610 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
PAX6-273ENST00000640610 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
PAX6-273ENST00000640610 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
PAX6-273ENST00000640610 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
PAX6-273ENST00000640610 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
PAX6-273ENST00000640610 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.07
PAX6-273ENST00000640610 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.07
PAX6-273ENST00000640610 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
PAX6-273ENST00000640610 WDR62O43379 1518 aa14.57□□□□□ -0.08
PAX6-273ENST00000640610 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
PAX6-273ENST00000640610 EEA1Q15075 1411 aa14.54□□□□□ -0.08
PAX6-273ENST00000640610 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
PAX6-273ENST00000640610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
PAX6-273ENST00000640610 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
PAX6-273ENST00000640610 CUX2O14529 1486 aa14.48□□□□□ -0.09
PAX6-273ENST00000640610 WDR97A6NE52 1622 aa14.47□□□□□ -0.09
PAX6-273ENST00000640610 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
PAX6-273ENST00000640610 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
PAX6-273ENST00000640610 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
PAX6-273ENST00000640610 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.09
PAX6-273ENST00000640610 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
PAX6-273ENST00000640610 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
PAX6-273ENST00000640610 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
PAX6-273ENST00000640610 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
PAX6-273ENST00000640610 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
PAX6-273ENST00000640610 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
PAX6-273ENST00000640610 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
PAX6-273ENST00000640610 KIF21BO75037 1637 aa14.39□□□□□ -0.11
PAX6-273ENST00000640610 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
PAX6-273ENST00000640610 ZNF608Q9ULD9 1512 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms