RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
SPIN3-242ENST00000640577 NPM1P06748 294 aaKnown RBP eCLIP21.55■■□□□ 1.04
SPIN3-242ENST00000640577 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
SPIN3-242ENST00000640577 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
SPIN3-242ENST00000640577 DCAF11Q8TEB1 546 aa21.54■■□□□ 1.04
SPIN3-242ENST00000640577 POLR1AO95602 1720 aaPredicted RBP21.53■■□□□ 1.04
SPIN3-242ENST00000640577 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
SPIN3-242ENST00000640577 KDM5CP41229 1560 aa21.52■■□□□ 1.03
SPIN3-242ENST00000640577 RALGAPBQ86X10 1494 aa21.52■■□□□ 1.03
SPIN3-242ENST00000640577 USP47Q96K76 1375 aa21.51■■□□□ 1.03
SPIN3-242ENST00000640577 KIF7Q2M1P5 1343 aa21.5■■□□□ 1.03
SPIN3-242ENST00000640577 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
SPIN3-242ENST00000640577 CCER2I3L3R5 266 aa21.49■■□□□ 1.03
SPIN3-242ENST00000640577 E9PCH4 1651 aa21.49■■□□□ 1.03
SPIN3-242ENST00000640577 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
SPIN3-242ENST00000640577 CNTLNQ9NXG0 1405 aa21.48■■□□□ 1.03
SPIN3-242ENST00000640577 KIDINS220Q9ULH0 1771 aa21.47■■□□□ 1.03
SPIN3-242ENST00000640577 ATP10AO60312 1499 aa21.47■■□□□ 1.03
SPIN3-242ENST00000640577 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
SPIN3-242ENST00000640577 A2MP01023 1474 aa21.46■■□□□ 1.03
SPIN3-242ENST00000640577 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
SPIN3-242ENST00000640577 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
SPIN3-242ENST00000640577 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
SPIN3-242ENST00000640577 TRPM1Q7Z4N2 1603 aa21.42■■□□□ 1.02
SPIN3-242ENST00000640577 KIF3BO15066 747 aa21.41■■□□□ 1.02
SPIN3-242ENST00000640577 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
SPIN3-242ENST00000640577 DHX29Q7Z478 1369 aaKnown RBP21.41■■□□□ 1.02
SPIN3-242ENST00000640577 VWDEQ8N2E2 1590 aa21.4■■□□□ 1.02
SPIN3-242ENST00000640577 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
SPIN3-242ENST00000640577 TET3O43151 1660 aa21.38■■□□□ 1.01
SPIN3-242ENST00000640577 EIF2AK4Q9P2K8 1649 aaKnown RBP21.38■■□□□ 1.01
SPIN3-242ENST00000640577 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
SPIN3-242ENST00000640577 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
SPIN3-242ENST00000640577 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
SPIN3-242ENST00000640577 POGZQ7Z3K3 1410 aa21.37■■□□□ 1.01
SPIN3-242ENST00000640577 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
SPIN3-242ENST00000640577 CFAP74Q9C0B2 1584 aa21.37■■□□□ 1.01
SPIN3-242ENST00000640577 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
SPIN3-242ENST00000640577 ST20-MTHFSA0A0A6YYL1 179 aa21.36■■□□□ 1.01
SPIN3-242ENST00000640577 TRPM2O94759 1503 aa21.35■■□□□ 1.01
SPIN3-242ENST00000640577 PTPRTO14522 1441 aa21.34■■□□□ 1.01
SPIN3-242ENST00000640577 CLTCL1P53675 1640 aa21.34■■□□□ 1.01
SPIN3-242ENST00000640577 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
SPIN3-242ENST00000640577 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1.01
SPIN3-242ENST00000640577 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1.01
SPIN3-242ENST00000640577 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1.01
SPIN3-242ENST00000640577 POLR3GLQ9BT43 218 aa21.33■■□□□ 1.01
SPIN3-242ENST00000640577 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1
SPIN3-242ENST00000640577 FRMPD1Q5SYB0 1578 aa21.32■■□□□ 1
SPIN3-242ENST00000640577 CEP152O94986 1710 aa21.32■■□□□ 1
SPIN3-242ENST00000640577 KANK1Q14678 1352 aa21.31■■□□□ 1
SPIN3-242ENST00000640577 RAPGEF3O95398 923 aa21.3■■□□□ 1
SPIN3-242ENST00000640577 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
SPIN3-242ENST00000640577 MLH3Q9UHC1 1453 aa21.3■■□□□ 1
SPIN3-242ENST00000640577 GPRASP1Q5JY77 1395 aa21.29■■□□□ 1
SPIN3-242ENST00000640577 ABCA6Q8N139 1617 aa21.28■■□□□ 1
SPIN3-242ENST00000640577 UGGT1Q9NYU2 1555 aa21.28■■□□□ 1
SPIN3-242ENST00000640577 PPRC1Q5VV67 1664 aaKnown RBP21.28■■□□□ 1
SPIN3-242ENST00000640577 MAP3K4Q9Y6R4 1608 aa21.27■■□□□ 1
SPIN3-242ENST00000640577 NEO1Q92859 1461 aa21.27■■□□□ 1
SPIN3-242ENST00000640577 RNF17Q9BXT8 1623 aaKnown RBP21.27■□□□□ 0.99
SPIN3-242ENST00000640577 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
SPIN3-242ENST00000640577 EFCAB6Q5THR3 1501 aa21.26■□□□□ 0.99
SPIN3-242ENST00000640577 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
SPIN3-242ENST00000640577 LAMC1P11047 1609 aa21.25■□□□□ 0.99
SPIN3-242ENST00000640577 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
SPIN3-242ENST00000640577 CFAP65Q6ZU64 1925 aaKnown RBP21.23■□□□□ 0.99
SPIN3-242ENST00000640577 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
SPIN3-242ENST00000640577 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-242ENST00000640577 LMTK2Q8IWU2 1503 aa21.21■□□□□ 0.99
SPIN3-242ENST00000640577 GGT6Q6P531 493 aa21.19■□□□□ 0.98
SPIN3-242ENST00000640577 TESK2Q96S53 571 aa21.18■□□□□ 0.98
SPIN3-242ENST00000640577 GLI2P10070 1586 aa21.18■□□□□ 0.98
SPIN3-242ENST00000640577 DIP2CQ9Y2E4 1556 aa21.18■□□□□ 0.98
SPIN3-242ENST00000640577 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
SPIN3-242ENST00000640577 KIF1BO60333 1816 aa21.16■□□□□ 0.98
SPIN3-242ENST00000640577 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
SPIN3-242ENST00000640577 DISP3Q9P2K9 1392 aa21.15■□□□□ 0.98
SPIN3-242ENST00000640577 NPATQ14207 1427 aa21.15■□□□□ 0.98
SPIN3-242ENST00000640577 DIP2BQ9P265 1576 aa21.15■□□□□ 0.98
SPIN3-242ENST00000640577 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPIN3-242ENST00000640577 YEATS2Q9ULM3 1422 aa21.14■□□□□ 0.97
SPIN3-242ENST00000640577 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
SPIN3-242ENST00000640577 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
SPIN3-242ENST00000640577 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
SPIN3-242ENST00000640577 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
SPIN3-242ENST00000640577 NEURL4Q96JN8 1562 aa21.13■□□□□ 0.97
SPIN3-242ENST00000640577 ABCC3O15438 1527 aa21.13■□□□□ 0.97
SPIN3-242ENST00000640577 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
SPIN3-242ENST00000640577 FAM9BQ8IZU0 186 aa21.11■□□□□ 0.97
SPIN3-242ENST00000640577 IFT172Q9UG01 1749 aa21.11■□□□□ 0.97
SPIN3-242ENST00000640577 SIGLEC1Q9BZZ2 1709 aa21.1■□□□□ 0.97
SPIN3-242ENST00000640577 WASHC2CQ9Y4E1 1318 aa21.09■□□□□ 0.97
SPIN3-242ENST00000640577 ADGRF5Q8IZF2 1346 aa21.08■□□□□ 0.97
SPIN3-242ENST00000640577 CAMSAP1Q5T5Y3 1602 aa21.08■□□□□ 0.97
SPIN3-242ENST00000640577 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
SPIN3-242ENST00000640577 ADGRB3O60242 1522 aa21.06■□□□□ 0.96
SPIN3-242ENST00000640577 KIAA1210Q9ULL0 1709 aa21.05■□□□□ 0.96
SPIN3-242ENST00000640577 MYOM2P54296 1465 aa21.05■□□□□ 0.96
SPIN3-242ENST00000640577 CFAP70Q5T0N1 1121 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms