RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 BCORL1Q5H9F3 1711 aa26.29■■□□□ 1.8
SPIN3-238ENST00000640421 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
SPIN3-238ENST00000640421 PZPP20742 1482 aa26.27■■□□□ 1.8
SPIN3-238ENST00000640421 KDM5DQ9BY66 1539 aa26.27■■□□□ 1.8
SPIN3-238ENST00000640421 NUP155O75694 1391 aa26.26■■□□□ 1.79
SPIN3-238ENST00000640421 RNF17Q9BXT8 1623 aaKnown RBP26.26■■□□□ 1.79
SPIN3-238ENST00000640421 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
SPIN3-238ENST00000640421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.79
SPIN3-238ENST00000640421 PRDM15P57071 1507 aaPredicted RBP26.23■■□□□ 1.79
SPIN3-238ENST00000640421 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
SPIN3-238ENST00000640421 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
SPIN3-238ENST00000640421 AGLP35573 1532 aa26.21■■□□□ 1.79
SPIN3-238ENST00000640421 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
SPIN3-238ENST00000640421 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
SPIN3-238ENST00000640421 VWDEQ8N2E2 1590 aa26.19■■□□□ 1.78
SPIN3-238ENST00000640421 SLC4A1APQ9BWU0 796 aaKnown RBP26.18■■□□□ 1.78
SPIN3-238ENST00000640421 GGT6Q6P531 493 aa26.16■■□□□ 1.78
SPIN3-238ENST00000640421 FOXD1Q16676 465 aa26.14■■□□□ 1.78
SPIN3-238ENST00000640421 CEP152O94986 1710 aa26.12■■□□□ 1.77
SPIN3-238ENST00000640421 PKD2Q13563 968 aa26.11■■□□□ 1.77
SPIN3-238ENST00000640421 KANK1Q14678 1352 aa26.1■■□□□ 1.77
SPIN3-238ENST00000640421 ABCC3O15438 1527 aa26.08■■□□□ 1.77
SPIN3-238ENST00000640421 TET3O43151 1660 aa26.07■■□□□ 1.76
SPIN3-238ENST00000640421 LMTK2Q8IWU2 1503 aa26.07■■□□□ 1.76
SPIN3-238ENST00000640421 MLECQ14165 292 aa26.06■■□□□ 1.76
SPIN3-238ENST00000640421 ARID4BQ4LE39 1312 aaPredicted RBP26.06■■□□□ 1.76
SPIN3-238ENST00000640421 E9PCH4 1651 aa26.05■■□□□ 1.76
SPIN3-238ENST00000640421 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
SPIN3-238ENST00000640421 EFCAB6Q5THR3 1501 aa26.03■■□□□ 1.76
SPIN3-238ENST00000640421 WASHC2CQ9Y4E1 1318 aa26.03■■□□□ 1.76
SPIN3-238ENST00000640421 ZC3H13Q5T200 1668 aaKnown RBP26.03■■□□□ 1.76
SPIN3-238ENST00000640421 ANKRD30BQ9BXX2 1392 aa26.02■■□□□ 1.76
SPIN3-238ENST00000640421 CAMSAP1Q5T5Y3 1602 aa26■■□□□ 1.75
SPIN3-238ENST00000640421 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
SPIN3-238ENST00000640421 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
SPIN3-238ENST00000640421 PLA2R1Q13018 1463 aa25.97■■□□□ 1.75
SPIN3-238ENST00000640421 NPATQ14207 1427 aa25.96■■□□□ 1.75
SPIN3-238ENST00000640421 PPP6R1Q9UPN7 881 aa25.95■■□□□ 1.74
SPIN3-238ENST00000640421 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
SPIN3-238ENST00000640421 ARHGAP31Q2M1Z3 1444 aa25.91■■□□□ 1.74
SPIN3-238ENST00000640421 RPRD2Q5VT52 1461 aaKnown RBP25.9■■□□□ 1.74
SPIN3-238ENST00000640421 CFAP65Q6ZU64 1925 aaKnown RBP25.9■■□□□ 1.74
SPIN3-238ENST00000640421 PTPRTO14522 1441 aa25.89■■□□□ 1.74
SPIN3-238ENST00000640421 NEUROD1Q13562 356 aa25.89■■□□□ 1.74
SPIN3-238ENST00000640421 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
SPIN3-238ENST00000640421 TRPM2O94759 1503 aa25.87■■□□□ 1.73
SPIN3-238ENST00000640421 MADDQ8WXG6 1647 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 PREX1Q8TCU6 1659 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 UGGT1Q9NYU2 1555 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 NOS1P29475 1434 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 ZMYM3Q14202 1370 aa25.83■■□□□ 1.73
SPIN3-238ENST00000640421 ESF1Q9H501 851 aaKnown RBP25.83■■□□□ 1.72
SPIN3-238ENST00000640421 CCDC144AA2RUR9 1427 aa25.82■■□□□ 1.72
SPIN3-238ENST00000640421 FBXO31Q5XUX0 539 aaPredicted RBP25.81■■□□□ 1.72
SPIN3-238ENST00000640421 CLTCL1P53675 1640 aa25.81■■□□□ 1.72
SPIN3-238ENST00000640421 SYNMO15061 1565 aa25.81■■□□□ 1.72
SPIN3-238ENST00000640421 ERVK-7P63135 1459 aa25.79■■□□□ 1.72
SPIN3-238ENST00000640421 ZEB1P37275 1124 aaPredicted RBP25.77■■□□□ 1.72
SPIN3-238ENST00000640421 C3P01024 1663 aa25.77■■□□□ 1.72
SPIN3-238ENST00000640421 RIMS1Q86UR5 1692 aaKnown RBP25.77■■□□□ 1.72
SPIN3-238ENST00000640421 SPATA31D1Q6ZQQ2 1576 aa25.76■■□□□ 1.71
SPIN3-238ENST00000640421 PIK3C2BO00750 1634 aa25.74■■□□□ 1.71
SPIN3-238ENST00000640421 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
SPIN3-238ENST00000640421 TONSLQ96HA7 1378 aa25.72■■□□□ 1.71
SPIN3-238ENST00000640421 SPATA31E1Q6ZUB1 1445 aa25.69■■□□□ 1.7
SPIN3-238ENST00000640421 L3MBTL2Q969R5 705 aa25.68■■□□□ 1.7
SPIN3-238ENST00000640421 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
SPIN3-238ENST00000640421 KIF1BO60333 1816 aa25.66■■□□□ 1.7
SPIN3-238ENST00000640421 IDI1Q13907 227 aa25.66■■□□□ 1.7
SPIN3-238ENST00000640421 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
SPIN3-238ENST00000640421 ADGRB3O60242 1522 aa25.63■■□□□ 1.69
SPIN3-238ENST00000640421 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
SPIN3-238ENST00000640421 TNRQ92752 1358 aa25.63■■□□□ 1.69
SPIN3-238ENST00000640421 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
SPIN3-238ENST00000640421 NEURL4Q96JN8 1562 aa25.61■■□□□ 1.69
SPIN3-238ENST00000640421 PTPRMP28827 1452 aa25.59■■□□□ 1.69
SPIN3-238ENST00000640421 TMEM131LA2VDJ0 1609 aa25.58■■□□□ 1.69
SPIN3-238ENST00000640421 MYO5BQ9ULV0 1848 aa25.58■■□□□ 1.69
SPIN3-238ENST00000640421 PPP1R15AO75807 674 aaPredicted RBP25.58■■□□□ 1.69
SPIN3-238ENST00000640421 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
SPIN3-238ENST00000640421 KDM4FA0A1W2PPD8 638 aa25.56■■□□□ 1.68
SPIN3-238ENST00000640421 DCAF11Q8TEB1 546 aa25.54■■□□□ 1.68
SPIN3-238ENST00000640421 MYO3AQ8NEV4 1616 aa25.52■■□□□ 1.68
SPIN3-238ENST00000640421 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
SPIN3-238ENST00000640421 NLRP1Q9C000 1473 aa25.51■■□□□ 1.67
SPIN3-238ENST00000640421 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
SPIN3-238ENST00000640421 A2ML1A8K2U0 1454 aa25.5■■□□□ 1.67
SPIN3-238ENST00000640421 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
SPIN3-238ENST00000640421 UBR1Q8IWV7 1749 aa25.49■■□□□ 1.67
SPIN3-238ENST00000640421 ZNF326Q5BKZ1 582 aaKnown RBP25.49■■□□□ 1.67
SPIN3-238ENST00000640421 PPLO60437 1756 aa25.48■■□□□ 1.67
SPIN3-238ENST00000640421 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
SPIN3-238ENST00000640421 KDM5AP29375 1690 aaKnown RBP25.46■■□□□ 1.67
SPIN3-238ENST00000640421 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
SPIN3-238ENST00000640421 STAG3Q9UJ98 1225 aa25.45■■□□□ 1.67
SPIN3-238ENST00000640421 SETD1BQ9UPS6 1966 aaKnown RBP25.44■■□□□ 1.66
SPIN3-238ENST00000640421 PRAG1Q86YV5 1406 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms