RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
NECAP1-225ENST00000640209 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
NECAP1-225ENST00000640209 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
NECAP1-225ENST00000640209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
NECAP1-225ENST00000640209 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
NECAP1-225ENST00000640209 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
NECAP1-225ENST00000640209 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
NECAP1-225ENST00000640209 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
NECAP1-225ENST00000640209 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
NECAP1-225ENST00000640209 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
NECAP1-225ENST00000640209 MYO5CQ9NQX4 1742 aa12.84□□□□□ -0.35
NECAP1-225ENST00000640209 UNC13BO14795 1591 aa12.84□□□□□ -0.35
NECAP1-225ENST00000640209 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
NECAP1-225ENST00000640209 ZCCHC11Q5TAX3 1644 aaKnown RBP12.83□□□□□ -0.36
NECAP1-225ENST00000640209 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
NECAP1-225ENST00000640209 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
NECAP1-225ENST00000640209 NBPF1Q3BBV0 1214 aa12.82□□□□□ -0.36
NECAP1-225ENST00000640209 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
NECAP1-225ENST00000640209 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
NECAP1-225ENST00000640209 SENP3-EIF4A1A0A087X0R7 540 aa12.82□□□□□ -0.36
NECAP1-225ENST00000640209 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
NECAP1-225ENST00000640209 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
NECAP1-225ENST00000640209 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
NECAP1-225ENST00000640209 PLXNC1O60486 1568 aa12.81□□□□□ -0.36
NECAP1-225ENST00000640209 PLCH2O75038 1416 aa12.81□□□□□ -0.36
NECAP1-225ENST00000640209 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
NECAP1-225ENST00000640209 A2MP01023 1474 aa12.8□□□□□ -0.36
NECAP1-225ENST00000640209 TRPM1Q7Z4N2 1603 aa12.79□□□□□ -0.36
NECAP1-225ENST00000640209 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
NECAP1-225ENST00000640209 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
NECAP1-225ENST00000640209 EFCAB2Q5VUJ9 269 aa12.78□□□□□ -0.36
NECAP1-225ENST00000640209 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
NECAP1-225ENST00000640209 ABCC1P33527 1531 aa12.77□□□□□ -0.37
NECAP1-225ENST00000640209 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
NECAP1-225ENST00000640209 PNISRQ8TF01 805 aaKnown RBP12.76□□□□□ -0.37
NECAP1-225ENST00000640209 E9PCH4 1651 aa12.76□□□□□ -0.37
NECAP1-225ENST00000640209 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
NECAP1-225ENST00000640209 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
NECAP1-225ENST00000640209 ERBINQ96RT1 1412 aa12.75□□□□□ -0.37
NECAP1-225ENST00000640209 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
NECAP1-225ENST00000640209 ATP10AO60312 1499 aa12.73□□□□□ -0.37
NECAP1-225ENST00000640209 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
NECAP1-225ENST00000640209 TESK2Q96S53 571 aa12.72□□□□□ -0.37
NECAP1-225ENST00000640209 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
NECAP1-225ENST00000640209 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
NECAP1-225ENST00000640209 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.37
NECAP1-225ENST00000640209 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.37
NECAP1-225ENST00000640209 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
NECAP1-225ENST00000640209 MYBBP1AQ9BQG0 1328 aaKnown RBP12.7□□□□□ -0.38
NECAP1-225ENST00000640209 PER1O15534 1290 aaPredicted RBP12.7□□□□□ -0.38
NECAP1-225ENST00000640209 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
NECAP1-225ENST00000640209 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
NECAP1-225ENST00000640209 ZFYVE16Q7Z3T8 1539 aa12.69□□□□□ -0.38
NECAP1-225ENST00000640209 COL17A1Q9UMD9 1497 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-225ENST00000640209 RALBP1Q15311 655 aa12.69□□□□□ -0.38
NECAP1-225ENST00000640209 ERICH6BQ5W0A0 696 aa12.69□□□□□ -0.38
NECAP1-225ENST00000640209 NUDCQ9Y266 331 aa12.69□□□□□ -0.38
NECAP1-225ENST00000640209 LAMC1P11047 1609 aa12.68□□□□□ -0.38
NECAP1-225ENST00000640209 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
NECAP1-225ENST00000640209 PARD3Q8TEW0 1356 aa12.67□□□□□ -0.38
NECAP1-225ENST00000640209 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
NECAP1-225ENST00000640209 RTEL1-TNFRSF6BF6WH68 1400 aa12.66□□□□□ -0.38
NECAP1-225ENST00000640209 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
NECAP1-225ENST00000640209 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
NECAP1-225ENST00000640209 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
NECAP1-225ENST00000640209 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
NECAP1-225ENST00000640209 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
NECAP1-225ENST00000640209 PANK3Q9H999 370 aa12.65□□□□□ -0.38
NECAP1-225ENST00000640209 FANCAO15360 1455 aa12.64□□□□□ -0.39
NECAP1-225ENST00000640209 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
NECAP1-225ENST00000640209 CLTCL1P53675 1640 aa12.64□□□□□ -0.39
NECAP1-225ENST00000640209 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
NECAP1-225ENST00000640209 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
NECAP1-225ENST00000640209 TRPM2O94759 1503 aa12.63□□□□□ -0.39
NECAP1-225ENST00000640209 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
NECAP1-225ENST00000640209 PTPRTO14522 1441 aa12.63□□□□□ -0.39
NECAP1-225ENST00000640209 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
NECAP1-225ENST00000640209 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-225ENST00000640209 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
NECAP1-225ENST00000640209 ATP7AQ04656 1500 aa12.62□□□□□ -0.39
NECAP1-225ENST00000640209 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
NECAP1-225ENST00000640209 KIF3BO15066 747 aa12.62□□□□□ -0.39
NECAP1-225ENST00000640209 TMF1P82094 1093 aa12.62□□□□□ -0.39
NECAP1-225ENST00000640209 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
NECAP1-225ENST00000640209 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 CEP152O94986 1710 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 MSH5O43196 834 aa12.6□□□□□ -0.39
NECAP1-225ENST00000640209 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
NECAP1-225ENST00000640209 TET3O43151 1660 aa12.59□□□□□ -0.39
NECAP1-225ENST00000640209 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
NECAP1-225ENST00000640209 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
NECAP1-225ENST00000640209 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
NECAP1-225ENST00000640209 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
NECAP1-225ENST00000640209 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
NECAP1-225ENST00000640209 KANK1Q14678 1352 aa12.56□□□□□ -0.4
NECAP1-225ENST00000640209 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
NECAP1-225ENST00000640209 KIDINS220Q9ULH0 1771 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms