RNA–Protein interactions for RNA: ENST00000639851.1

KCNMA1-272, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best)

Gene KCNMA1, Length 3,866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-272ENST00000639851 RPRD2Q5VT52 1461 aaKnown RBP10.52□□□□□ -0.73
KCNMA1-272ENST00000639851 FAM50AQ14320 339 aaKnown RBP10.51□□□□□ -0.73
KCNMA1-272ENST00000639851 ZNF644Q9H582 1327 aaPredicted RBP10.5□□□□□ -0.73
KCNMA1-272ENST00000639851 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
KCNMA1-272ENST00000639851 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
KCNMA1-272ENST00000639851 ARHGAP31Q2M1Z3 1444 aa10.49□□□□□ -0.73
KCNMA1-272ENST00000639851 KDM5AP29375 1690 aaKnown RBP10.48□□□□□ -0.73
KCNMA1-272ENST00000639851 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
KCNMA1-272ENST00000639851 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
KCNMA1-272ENST00000639851 CNTLNQ9NXG0 1405 aa10.46□□□□□ -0.73
KCNMA1-272ENST00000639851 PZPP20742 1482 aa10.46□□□□□ -0.73
KCNMA1-272ENST00000639851 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.73
KCNMA1-272ENST00000639851 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.74
KCNMA1-272ENST00000639851 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
KCNMA1-272ENST00000639851 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
KCNMA1-272ENST00000639851 ABCC3O15438 1527 aa10.44□□□□□ -0.74
KCNMA1-272ENST00000639851 KANK1Q14678 1352 aa10.43□□□□□ -0.74
KCNMA1-272ENST00000639851 SPHKAPQ2M3C7 1700 aa10.43□□□□□ -0.74
KCNMA1-272ENST00000639851 TRPM2O94759 1503 aa10.43□□□□□ -0.74
KCNMA1-272ENST00000639851 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
KCNMA1-272ENST00000639851 DHX57Q6P158 1386 aaKnown RBP10.42□□□□□ -0.74
KCNMA1-272ENST00000639851 PTPRTO14522 1441 aa10.42□□□□□ -0.74
KCNMA1-272ENST00000639851 E9PCH4 1651 aa10.42□□□□□ -0.74
KCNMA1-272ENST00000639851 PIK3C2BO00750 1634 aa10.41□□□□□ -0.74
KCNMA1-272ENST00000639851 YEATS2Q9ULM3 1422 aa10.41□□□□□ -0.74
KCNMA1-272ENST00000639851 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
KCNMA1-272ENST00000639851 CEP152O94986 1710 aa10.41□□□□□ -0.74
KCNMA1-272ENST00000639851 SIGLEC1Q9BZZ2 1709 aa10.4□□□□□ -0.74
KCNMA1-272ENST00000639851 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
KCNMA1-272ENST00000639851 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
KCNMA1-272ENST00000639851 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
KCNMA1-272ENST00000639851 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
KCNMA1-272ENST00000639851 FER1L4A9Z1Z3 1794 aa10.38□□□□□ -0.75
KCNMA1-272ENST00000639851 PREX1Q8TCU6 1659 aa10.37□□□□□ -0.75
KCNMA1-272ENST00000639851 NOS1P29475 1434 aa10.36□□□□□ -0.75
KCNMA1-272ENST00000639851 NPATQ14207 1427 aa10.36□□□□□ -0.75
KCNMA1-272ENST00000639851 CLTCQ00610 1675 aaKnown RBP10.35□□□□□ -0.75
KCNMA1-272ENST00000639851 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
KCNMA1-272ENST00000639851 ANKRD30BQ9BXX2 1392 aa10.35□□□□□ -0.75
KCNMA1-272ENST00000639851 RRP7BPQ9NSQ0 103 aa10.34□□□□□ -0.75
KCNMA1-272ENST00000639851 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
KCNMA1-272ENST00000639851 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
KCNMA1-272ENST00000639851 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
KCNMA1-272ENST00000639851 NUP155O75694 1391 aa10.33□□□□□ -0.76
KCNMA1-272ENST00000639851 KIF1BO60333 1816 aa10.33□□□□□ -0.76
KCNMA1-272ENST00000639851 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 ADGRB3O60242 1522 aa10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 TRHP20396 242 aaPredicted RBP10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 LAMC1P11047 1609 aa10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 MPHOSPH9Q99550 1183 aa10.32□□□□□ -0.76
KCNMA1-272ENST00000639851 ERVK-7P63135 1459 aa10.31□□□□□ -0.76
KCNMA1-272ENST00000639851 C3P01024 1663 aa10.31□□□□□ -0.76
KCNMA1-272ENST00000639851 SYNMO15061 1565 aa10.3□□□□□ -0.76
KCNMA1-272ENST00000639851 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
KCNMA1-272ENST00000639851 CLTCL1P53675 1640 aa10.3□□□□□ -0.76
KCNMA1-272ENST00000639851 MYOM2P54296 1465 aa10.29□□□□□ -0.76
KCNMA1-272ENST00000639851 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
KCNMA1-272ENST00000639851 PLA2R1Q13018 1463 aa10.28□□□□□ -0.76
KCNMA1-272ENST00000639851 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
KCNMA1-272ENST00000639851 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.76
KCNMA1-272ENST00000639851 ZFYVE9O95405 1425 aa10.27□□□□□ -0.77
KCNMA1-272ENST00000639851 KIF3BO15066 747 aa10.27□□□□□ -0.77
KCNMA1-272ENST00000639851 SPATA31E1Q6ZUB1 1445 aa10.26□□□□□ -0.77
KCNMA1-272ENST00000639851 NRXN1Q9ULB1 1477 aa10.26□□□□□ -0.77
KCNMA1-272ENST00000639851 PPLO60437 1756 aa10.26□□□□□ -0.77
KCNMA1-272ENST00000639851 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
KCNMA1-272ENST00000639851 CCDC144AA2RUR9 1427 aa10.25□□□□□ -0.77
KCNMA1-272ENST00000639851 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
KCNMA1-272ENST00000639851 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
KCNMA1-272ENST00000639851 MYO3AQ8NEV4 1616 aa10.25□□□□□ -0.77
KCNMA1-272ENST00000639851 RIMS1Q86UR5 1692 aaKnown RBP10.24□□□□□ -0.77
KCNMA1-272ENST00000639851 SLC52A1Q9NWF4 448 aa10.24□□□□□ -0.77
KCNMA1-272ENST00000639851 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
KCNMA1-272ENST00000639851 UBR1Q8IWV7 1749 aa10.23□□□□□ -0.77
KCNMA1-272ENST00000639851 SETBP1Q9Y6X0 1596 aa10.23□□□□□ -0.77
KCNMA1-272ENST00000639851 TRIM52Q96A61 297 aa10.22□□□□□ -0.77
KCNMA1-272ENST00000639851 PKD2Q13563 968 aa10.22□□□□□ -0.77
KCNMA1-272ENST00000639851 SLIT1O75093 1534 aa10.22□□□□□ -0.77
KCNMA1-272ENST00000639851 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
KCNMA1-272ENST00000639851 WASHC2CQ9Y4E1 1318 aa10.22□□□□□ -0.77
KCNMA1-272ENST00000639851 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
KCNMA1-272ENST00000639851 PLPPR3Q6T4P5 718 aa10.21□□□□□ -0.78
KCNMA1-272ENST00000639851 A2ML1A8K2U0 1454 aa10.21□□□□□ -0.78
KCNMA1-272ENST00000639851 PRAG1Q86YV5 1406 aa10.21□□□□□ -0.78
KCNMA1-272ENST00000639851 SETD1BQ9UPS6 1966 aaKnown RBP10.21□□□□□ -0.78
KCNMA1-272ENST00000639851 ZMYM3Q14202 1370 aa10.21□□□□□ -0.78
KCNMA1-272ENST00000639851 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
KCNMA1-272ENST00000639851 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
KCNMA1-272ENST00000639851 YTHDC1Q96MU7 727 aaKnown RBP10.2□□□□□ -0.78
KCNMA1-272ENST00000639851 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
KCNMA1-272ENST00000639851 TRPM1Q7Z4N2 1603 aa10.19□□□□□ -0.78
KCNMA1-272ENST00000639851 RALGAPBQ86X10 1494 aa10.19□□□□□ -0.78
KCNMA1-272ENST00000639851 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
KCNMA1-272ENST00000639851 TNRQ92752 1358 aa10.18□□□□□ -0.78
KCNMA1-272ENST00000639851 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
KCNMA1-272ENST00000639851 PTPRMP28827 1452 aa10.17□□□□□ -0.78
KCNMA1-272ENST00000639851 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
KCNMA1-272ENST00000639851 TONSLQ96HA7 1378 aa10.16□□□□□ -0.78
KCNMA1-272ENST00000639851 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms