RNA–Protein interactions for RNA: ENST00000639851.1

KCNMA1-272, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best)

Gene KCNMA1, Length 3,866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-272ENST00000639851 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
KCNMA1-272ENST00000639851 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
KCNMA1-272ENST00000639851 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
KCNMA1-272ENST00000639851 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
KCNMA1-272ENST00000639851 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
KCNMA1-272ENST00000639851 NACADO15069 1562 aa13.9□□□□□ -0.18
KCNMA1-272ENST00000639851 ABCC9O60706 1549 aa13.77□□□□□ -0.21
KCNMA1-272ENST00000639851 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.21
KCNMA1-272ENST00000639851 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
KCNMA1-272ENST00000639851 UNC13AQ9UPW8 1703 aa13.41□□□□□ -0.26
KCNMA1-272ENST00000639851 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
KCNMA1-272ENST00000639851 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
KCNMA1-272ENST00000639851 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
KCNMA1-272ENST00000639851 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
KCNMA1-272ENST00000639851 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
KCNMA1-272ENST00000639851 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
KCNMA1-272ENST00000639851 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-272ENST00000639851 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
KCNMA1-272ENST00000639851 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
KCNMA1-272ENST00000639851 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.36
KCNMA1-272ENST00000639851 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
KCNMA1-272ENST00000639851 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-272ENST00000639851 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
KCNMA1-272ENST00000639851 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
KCNMA1-272ENST00000639851 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-272ENST00000639851 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
KCNMA1-272ENST00000639851 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
KCNMA1-272ENST00000639851 WIZO95785 1651 aa12.65□□□□□ -0.38
KCNMA1-272ENST00000639851 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
KCNMA1-272ENST00000639851 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
KCNMA1-272ENST00000639851 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
KCNMA1-272ENST00000639851 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
KCNMA1-272ENST00000639851 CFTRP13569 1480 aa12.35□□□□□ -0.43
KCNMA1-272ENST00000639851 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-272ENST00000639851 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
KCNMA1-272ENST00000639851 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
KCNMA1-272ENST00000639851 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
KCNMA1-272ENST00000639851 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
KCNMA1-272ENST00000639851 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
KCNMA1-272ENST00000639851 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
KCNMA1-272ENST00000639851 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
KCNMA1-272ENST00000639851 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
KCNMA1-272ENST00000639851 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
KCNMA1-272ENST00000639851 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
KCNMA1-272ENST00000639851 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
KCNMA1-272ENST00000639851 WDR62O43379 1518 aa12.08□□□□□ -0.47
KCNMA1-272ENST00000639851 THOC2Q8NI27 1593 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-272ENST00000639851 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
KCNMA1-272ENST00000639851 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
KCNMA1-272ENST00000639851 NESP48681 1621 aa12.02□□□□□ -0.49
KCNMA1-272ENST00000639851 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
KCNMA1-272ENST00000639851 CUX1P39880 1505 aa12□□□□□ -0.49
KCNMA1-272ENST00000639851 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
KCNMA1-272ENST00000639851 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
KCNMA1-272ENST00000639851 EEA1Q15075 1411 aa11.97□□□□□ -0.49
KCNMA1-272ENST00000639851 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
KCNMA1-272ENST00000639851 CUX2O14529 1486 aa11.95□□□□□ -0.5
KCNMA1-272ENST00000639851 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
KCNMA1-272ENST00000639851 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
KCNMA1-272ENST00000639851 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
KCNMA1-272ENST00000639851 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
KCNMA1-272ENST00000639851 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-272ENST00000639851 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
KCNMA1-272ENST00000639851 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
KCNMA1-272ENST00000639851 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
KCNMA1-272ENST00000639851 CUL7Q14999 1698 aa11.84□□□□□ -0.51
KCNMA1-272ENST00000639851 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.51
KCNMA1-272ENST00000639851 KIF21BO75037 1637 aa11.8□□□□□ -0.52
KCNMA1-272ENST00000639851 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
KCNMA1-272ENST00000639851 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
KCNMA1-272ENST00000639851 SOGA1O94964 1423 aa11.78□□□□□ -0.52
KCNMA1-272ENST00000639851 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
KCNMA1-272ENST00000639851 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-272ENST00000639851 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-272ENST00000639851 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
KCNMA1-272ENST00000639851 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
KCNMA1-272ENST00000639851 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
KCNMA1-272ENST00000639851 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
KCNMA1-272ENST00000639851 RAD54L2Q9Y4B4 1467 aa11.68□□□□□ -0.54
KCNMA1-272ENST00000639851 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.55
KCNMA1-272ENST00000639851 FAM9AQ8IZU1 332 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-272ENST00000639851 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
KCNMA1-272ENST00000639851 IGF1RP08069 1367 aa11.62□□□□□ -0.55
KCNMA1-272ENST00000639851 CTTNBP2Q8WZ74 1663 aa11.62□□□□□ -0.55
KCNMA1-272ENST00000639851 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
KCNMA1-272ENST00000639851 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
KCNMA1-272ENST00000639851 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
KCNMA1-272ENST00000639851 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
KCNMA1-272ENST00000639851 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
KCNMA1-272ENST00000639851 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
KCNMA1-272ENST00000639851 CARMIL1Q5VZK9 1371 aa11.55□□□□□ -0.56
KCNMA1-272ENST00000639851 NUP160Q12769 1436 aa11.54□□□□□ -0.56
KCNMA1-272ENST00000639851 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
KCNMA1-272ENST00000639851 EFCAB5A4FU69 1503 aa11.54□□□□□ -0.56
KCNMA1-272ENST00000639851 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
KCNMA1-272ENST00000639851 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
KCNMA1-272ENST00000639851 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
KCNMA1-272ENST00000639851 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
KCNMA1-272ENST00000639851 CHD1O14646 1710 aa11.51□□□□□ -0.57
KCNMA1-272ENST00000639851 UGGT2Q9NYU1 1516 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms